RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 NDUFB3O43676 98 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 KLF7O75840 302 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 IGLV3-25P01717 112 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 SLC25A5P05141 298 aaKnown RBP2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 CTSDP07339 412 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 CFC1BP0CG36 223 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 CGB3P0DN86 165 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 CGB7P0DN87 165 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 PYYP10082 97 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 HLA-DRB4P13762 266 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 S100A4P26447 101 aaKnown RBP2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 SRP14P37108 136 aaKnown RBP2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 CSN1S1P47710 185 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 NMUP48645 174 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 UBE2BP63146 152 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 ZNF876PQ49A33 203 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 LUZP6Q538Z0 58 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 FAM104BQ5XKR9 115 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 TEN1Q86WV5 123 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 PCP2Q8IVA1 136 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 C10orf126Q8N4M7 172 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 ZFP62Q8NB50 900 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 OR10G2Q8NGC3 310 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 RBPMSQ93062 196 aaKnown RBP2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 RMI2Q96E14 147 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 C1orf147Q96MC9 270 aaPredicted RBP2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 COMMD3Q9UBI1 195 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 LINC00588Q9Y4M8 146 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 HLA-DRB4X5D2U9 266 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 ARHGAP5Q13017 1502 aa2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 ARHGEF28Q8N1W1 1705 aaKnown RBP2.51□□□□□ -2.01
HMGB1P12-201ENST00000438594 GON4LQ3T8J9 2241 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 ATG2AQ2TAZ0 1938 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 NRXN3Q9Y4C0 1643 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 FER1L6Q2WGJ9 1857 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 ADGRB2O60241 1585 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 CDC42BPGQ6DT37 1551 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 IGLV3-10A0A075B6K4 115 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 A0A0J9YW62 118 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 A0A1B0GVX0 72 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 UQCRQO14949 82 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 SLC25A14O95258 325 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 HSPB1P04792 205 aaKnown RBP2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 ZNF883P0CG24 379 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 ZNF286BP0CG31 522 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 UBA52P62987 128 aaKnown RBP2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 EIF5AP63241 154 aaKnown RBP2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 ZNF678Q5SXM1 525 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 TMEM91Q6ZNR0 172 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 SPATA12Q7Z6I5 190 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 ZNF101Q8IZC7 436 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 Q8N377 158 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 CD177Q8N6Q3 437 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 APCDD1LQ8NCL9 501 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 MORN4Q8NDC4 146 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 LINC01006Q8NI28 216 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 SPANXDQ9BXN6 97 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 PLA2G2FQ9BZM2 168 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 GFRA4Q9GZZ7 299 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 MED9Q9NWA0 146 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 ZNF586Q9NXT0 402 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 ZNF581Q9P0T4 197 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 PHLDA3Q9Y5J5 127 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 NEXMIFQ5QGS0 1516 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 KNDC1Q76NI1 1749 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 ANKRD26Q9UPS8 1709 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 ERVK-7P63135 1459 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 SHPRHQ149N8 1683 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 USP54Q70EL1 1684 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 BLMP54132 1417 aaPredicted RBP2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 TSPOAP1O95153 1857 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 NLRC5Q86WI3 1866 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 RIMBP3CA6NJZ7 1639 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 RIMBP3BA6NNM3 1639 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 RIMBP3Q9UFD9 1639 aa2.5□□□□□ -2.01
HMGB1P12-201ENST00000438594 KTN1Q86UP2 1357 aaKnown RBP2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 PHIPQ8WWQ0 1821 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 DOCK4Q8N1I0 1966 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 LRRC7Q96NW7 1537 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 AKAP11Q9UKA4 1901 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 PLXNB3Q9ULL4 1909 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 TRAV12-2A0A075B6T6 113 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 IGKV3D-15A0A087WSY6 115 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 IGHV5-51A0A0C4DH38 117 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 IGHV5-10-1A0A0J9YXX1 117 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 A8MWL6 223 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 LEPROTO15243 131 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 SOD1P00441 154 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 IGKV1-16P04430 117 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 ZNF688P0C7X2 276 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 CFC1P0CG37 223 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 IGHV1-8P0DP01 117 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 IFITM1P13164 125 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 NOVP48745 357 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 YPEL3P61236 119 aaPredicted RBP2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 SNRPD3P62318 126 aaKnown RBP2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 MRPL54Q6P161 138 aaKnown RBP2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 ADM2Q7Z4H4 148 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 ATOH7Q8N100 152 aa2.49□□□□□ -2.01
HMGB1P12-201ENST00000438594 TMEM256Q8N2U0 113 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms