RNA–Protein interactions for RNA: ENST00000437811.1

HLA-DPA1-243, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-243ENST00000437811 PUS1Q9Y606 427 aaKnown RBP eCLIP10.52□□□□□ -0.73
HLA-DPA1-243ENST00000437811 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.51□□□□□ -0.73
HLA-DPA1-243ENST00000437811 A0A0G2JLM5 398 aa10.51□□□□□ -0.73
HLA-DPA1-243ENST00000437811 H3BRN7 92 aa10.51□□□□□ -0.73
HLA-DPA1-243ENST00000437811 UBE2G2P60604 165 aa10.51□□□□□ -0.73
HLA-DPA1-243ENST00000437811 USF2Q15853 346 aaPredicted RBP10.51□□□□□ -0.73
HLA-DPA1-243ENST00000437811 LCNL1Q6ZST4 164 aa10.51□□□□□ -0.73
HLA-DPA1-243ENST00000437811 ZNF418Q8TF45 676 aaPredicted RBP10.51□□□□□ -0.73
HLA-DPA1-243ENST00000437811 SHANK2-AS3Q9BTD1 123 aa10.51□□□□□ -0.73
HLA-DPA1-243ENST00000437811 PAXXQ9BUH6 204 aa10.51□□□□□ -0.73
HLA-DPA1-243ENST00000437811 SERTAD4Q9NUC0 356 aa10.51□□□□□ -0.73
HLA-DPA1-243ENST00000437811 ARL2-SNX15V9GYD0 113 aa10.51□□□□□ -0.73
HLA-DPA1-243ENST00000437811 MYO9AB2RTY4 2548 aa10.5□□□□□ -0.73
HLA-DPA1-243ENST00000437811 FAM181BA6NEQ2 426 aa10.5□□□□□ -0.73
HLA-DPA1-243ENST00000437811 RNASE1P07998 156 aaKnown RBP10.5□□□□□ -0.73
HLA-DPA1-243ENST00000437811 ELANEP08246 267 aa10.5□□□□□ -0.73
HLA-DPA1-243ENST00000437811 CD81P60033 236 aa10.5□□□□□ -0.73
HLA-DPA1-243ENST00000437811 UBE2L3P68036 154 aaKnown RBP10.5□□□□□ -0.73
HLA-DPA1-243ENST00000437811 FOXE3Q13461 319 aa10.5□□□□□ -0.73
HLA-DPA1-243ENST00000437811 ZNF343Q6P1L6 599 aa10.5□□□□□ -0.73
HLA-DPA1-243ENST00000437811 C10orf99Q6UWK7 81 aa10.5□□□□□ -0.73
HLA-DPA1-243ENST00000437811 Q6ZSV7 163 aa10.5□□□□□ -0.73
HLA-DPA1-243ENST00000437811 S100A7AQ86SG5 101 aa10.5□□□□□ -0.73
HLA-DPA1-243ENST00000437811 CYB561D1Q8N8Q1 229 aa10.5□□□□□ -0.73
HLA-DPA1-243ENST00000437811 STXBP6Q8NFX7 210 aa10.5□□□□□ -0.73
HLA-DPA1-243ENST00000437811 TXNDC17Q9BRA2 123 aa10.5□□□□□ -0.73
HLA-DPA1-243ENST00000437811 OR51M1Q9H341 326 aa10.5□□□□□ -0.73
HLA-DPA1-243ENST00000437811 ZFAND3Q9H8U3 227 aa10.5□□□□□ -0.73
HLA-DPA1-243ENST00000437811 GNB4Q9HAV0 340 aa10.5□□□□□ -0.73
HLA-DPA1-243ENST00000437811 ZNF469Q96JG9 3925 aaPredicted RBP10.49□□□□□ -0.73
HLA-DPA1-243ENST00000437811 FAM74A7A6NL05 159 aa10.49□□□□□ -0.73
HLA-DPA1-243ENST00000437811 C11orf94C9JXX5 98 aa10.49□□□□□ -0.73
HLA-DPA1-243ENST00000437811 PPP5D1E7EU14 171 aa10.49□□□□□ -0.73
HLA-DPA1-243ENST00000437811 IGHV3-11P01762 117 aa10.49□□□□□ -0.73
HLA-DPA1-243ENST00000437811 APOC3P02656 99 aa10.49□□□□□ -0.73
HLA-DPA1-243ENST00000437811 OR10J4P0C629 311 aa10.49□□□□□ -0.73
HLA-DPA1-243ENST00000437811 PYYP10082 97 aa10.49□□□□□ -0.73
HLA-DPA1-243ENST00000437811 GP9P14770 177 aa10.49□□□□□ -0.73
HLA-DPA1-243ENST00000437811 ARL3P36405 182 aa10.49□□□□□ -0.73
HLA-DPA1-243ENST00000437811 ATP5G3P48201 142 aa10.49□□□□□ -0.73
HLA-DPA1-243ENST00000437811 HILS1P60008 231 aa10.49□□□□□ -0.73
HLA-DPA1-243ENST00000437811 RPL15P61313 204 aaKnown RBP10.49□□□□□ -0.73
HLA-DPA1-243ENST00000437811 RELQ04864 619 aaPredicted RBP10.49□□□□□ -0.73
HLA-DPA1-243ENST00000437811 TEX38Q6PEX7 206 aa10.49□□□□□ -0.73
HLA-DPA1-243ENST00000437811 TOMM20LQ6UXN7 152 aa10.49□□□□□ -0.73
HLA-DPA1-243ENST00000437811 MYOZ3Q8TDC0 251 aa10.49□□□□□ -0.73
HLA-DPA1-243ENST00000437811 FXYD5Q96DB9 178 aa10.49□□□□□ -0.73
HLA-DPA1-243ENST00000437811 YTHDF2Q9Y5A9 579 aaKnown RBP10.49□□□□□ -0.73
HLA-DPA1-243ENST00000437811 SVEP1Q4LDE5 3571 aa10.48□□□□□ -0.73
HLA-DPA1-243ENST00000437811 TMEM250H0YL14 139 aa10.48□□□□□ -0.73
HLA-DPA1-243ENST00000437811 BMPR1BO00238 502 aa10.48□□□□□ -0.73
HLA-DPA1-243ENST00000437811 KIAA0141Q14154 515 aaPredicted RBP10.48□□□□□ -0.73
HLA-DPA1-243ENST00000437811 SOHLH1Q5JUK2 328 aa10.48□□□□□ -0.73
HLA-DPA1-243ENST00000437811 FAM209BQ5JX69 171 aa10.48□□□□□ -0.73
HLA-DPA1-243ENST00000437811 CST9LP1Q5W188 147 aa10.48□□□□□ -0.73
HLA-DPA1-243ENST00000437811 FAM90A2PQ658T7 463 aa10.48□□□□□ -0.73
HLA-DPA1-243ENST00000437811 RNF152Q8N8N0 203 aa10.48□□□□□ -0.73
HLA-DPA1-243ENST00000437811 OR4X2Q8NGF9 303 aa10.48□□□□□ -0.73
HLA-DPA1-243ENST00000437811 OR4F5Q8NH21 305 aa10.48□□□□□ -0.73
HLA-DPA1-243ENST00000437811 OR4F4Q96R69 305 aa10.48□□□□□ -0.73
HLA-DPA1-243ENST00000437811 TMEM14CQ9P0S9 112 aa10.48□□□□□ -0.73
HLA-DPA1-243ENST00000437811 RABAC1Q9UI14 185 aa10.48□□□□□ -0.73
HLA-DPA1-243ENST00000437811 ANK3Q12955 4377 aaKnown RBP10.48□□□□□ -0.73
HLA-DPA1-243ENST00000437811 IGHV3-35A0A0C4DH35 117 aa10.47□□□□□ -0.73
HLA-DPA1-243ENST00000437811 A0A1W2PRE2 83 aa10.47□□□□□ -0.73
HLA-DPA1-243ENST00000437811 ZNF98A6NK75 572 aa10.47□□□□□ -0.73
HLA-DPA1-243ENST00000437811 TRBV12-3P01733 135 aa10.47□□□□□ -0.73
HLA-DPA1-243ENST00000437811 GUCA2BQ16661 112 aa10.47□□□□□ -0.73
HLA-DPA1-243ENST00000437811 LEMD1Q68G75 181 aa10.47□□□□□ -0.73
HLA-DPA1-243ENST00000437811 INAFM1C9JVW0 142 aa10.46□□□□□ -0.74
HLA-DPA1-243ENST00000437811 F6UZH7 168 aa10.46□□□□□ -0.74
HLA-DPA1-243ENST00000437811 PDE6DO43924 150 aa10.46□□□□□ -0.74
HLA-DPA1-243ENST00000437811 RPLP1P05386 114 aaKnown RBP10.46□□□□□ -0.74
HLA-DPA1-243ENST00000437811 S100A7P31151 101 aa10.46□□□□□ -0.74
HLA-DPA1-243ENST00000437811 CEBPGP53567 150 aa10.46□□□□□ -0.74
HLA-DPA1-243ENST00000437811 Q71RC1 249 aaPredicted RBP10.46□□□□□ -0.74
HLA-DPA1-243ENST00000437811 SVBPQ8N300 66 aa10.46□□□□□ -0.74
HLA-DPA1-243ENST00000437811 JMJD8Q96S16 334 aa10.46□□□□□ -0.74
HLA-DPA1-243ENST00000437811 RNF24Q9Y225 148 aa10.46□□□□□ -0.74
HLA-DPA1-243ENST00000437811 ACANP16112 2415 aa10.46□□□□□ -0.74
HLA-DPA1-243ENST00000437811 TLN2Q9Y4G6 2542 aa10.45□□□□□ -0.74
HLA-DPA1-243ENST00000437811 CLPSL1A2RUU4 121 aa10.45□□□□□ -0.74
HLA-DPA1-243ENST00000437811 NDUFA4O00483 81 aa10.45□□□□□ -0.74
HLA-DPA1-243ENST00000437811 CRYBA1P05813 215 aa10.45□□□□□ -0.74
HLA-DPA1-243ENST00000437811 LINC01559Q495D7 138 aa10.45□□□□□ -0.74
HLA-DPA1-243ENST00000437811 BPIFA4PQ86YQ2 179 aa10.45□□□□□ -0.74
HLA-DPA1-243ENST00000437811 CCDC28AQ8IWP9 274 aa10.45□□□□□ -0.74
HLA-DPA1-243ENST00000437811 PEF1Q9UBV8 284 aaKnown RBP10.45□□□□□ -0.74
HLA-DPA1-243ENST00000437811 IGHV3OR16-8A0A075B7F1 116 aa10.44□□□□□ -0.74
HLA-DPA1-243ENST00000437811 GGTLC3B5MD39 225 aa10.44□□□□□ -0.74
HLA-DPA1-243ENST00000437811 MRPS12O15235 138 aaKnown RBP10.44□□□□□ -0.74
HLA-DPA1-243ENST00000437811 GGCTO75223 188 aaKnown RBP10.44□□□□□ -0.74
HLA-DPA1-243ENST00000437811 NBEAP1P0C6P0 100 aa10.44□□□□□ -0.74
HLA-DPA1-243ENST00000437811 HIST1H1EP10412 219 aaKnown RBP10.44□□□□□ -0.74
HLA-DPA1-243ENST00000437811 KLHDC1Q8N7A1 406 aa10.44□□□□□ -0.74
HLA-DPA1-243ENST00000437811 C11orf52Q96A22 123 aa10.44□□□□□ -0.74
HLA-DPA1-243ENST00000437811 C16orf95Q9H693 158 aa10.44□□□□□ -0.74
HLA-DPA1-243ENST00000437811 SONP18583 2426 aaKnown RBP10.43□□□□□ -0.74
HLA-DPA1-243ENST00000437811 SNAPINO95295 136 aa10.43□□□□□ -0.74
HLA-DPA1-243ENST00000437811 LGALS1P09382 135 aaKnown RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms