RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 ZNF343Q6P1L6 599 aa12.01□□□□□ -0.49
SGCE-205ENST00000437425 KRTAP1-3Q8IUG1 177 aa12.01□□□□□ -0.49
SGCE-205ENST00000437425 USMG5Q96IX5 58 aa12.01□□□□□ -0.49
SGCE-205ENST00000437425 UTP20O75691 2785 aaKnown RBP12.01□□□□□ -0.49
SGCE-205ENST00000437425 GGTLC3B5MD39 225 aa12.01□□□□□ -0.49
SGCE-205ENST00000437425 BMPR1BO00238 502 aa12.01□□□□□ -0.49
SGCE-205ENST00000437425 S100A9P06702 114 aaKnown RBP12.01□□□□□ -0.49
SGCE-205ENST00000437425 CTSGP08311 255 aa12.01□□□□□ -0.49
SGCE-205ENST00000437425 PYYP10082 97 aa12.01□□□□□ -0.49
SGCE-205ENST00000437425 TAS2R60P59551 318 aa12.01□□□□□ -0.49
SGCE-205ENST00000437425 RELQ04864 619 aaPredicted RBP12.01□□□□□ -0.49
SGCE-205ENST00000437425 DEFB112Q30KQ8 113 aa12.01□□□□□ -0.49
SGCE-205ENST00000437425 C9orf152Q5JTZ5 239 aa12.01□□□□□ -0.49
SGCE-205ENST00000437425 FAM209BQ5JX69 171 aa12.01□□□□□ -0.49
SGCE-205ENST00000437425 LINC01551Q86U37 167 aa12.01□□□□□ -0.49
SGCE-205ENST00000437425 LYPD1Q8N2G4 141 aa12.01□□□□□ -0.49
SGCE-205ENST00000437425 OR4F17Q8NGA8 305 aa12.01□□□□□ -0.49
SGCE-205ENST00000437425 BTF3L4Q96K17 158 aa12.01□□□□□ -0.49
SGCE-205ENST00000437425 FBN2P35556 2912 aa12□□□□□ -0.49
SGCE-205ENST00000437425 CRYBG3Q68DQ2 2970 aa12□□□□□ -0.49
SGCE-205ENST00000437425 G3V318 75 aa12□□□□□ -0.49
SGCE-205ENST00000437425 RPL35P42766 123 aaKnown RBP12□□□□□ -0.49
SGCE-205ENST00000437425 IER3P46695 156 aa12□□□□□ -0.49
SGCE-205ENST00000437425 OR5B12Q96R08 314 aa12□□□□□ -0.49
SGCE-205ENST00000437425 FOXC2Q99958 501 aa12□□□□□ -0.49
SGCE-205ENST00000437425 PRDM13Q9H4Q3 707 aa12□□□□□ -0.49
SGCE-205ENST00000437425 OR2T8A6NH00 312 aa11.99□□□□□ -0.49
SGCE-205ENST00000437425 LINC01548A6NM66 108 aa11.99□□□□□ -0.49
SGCE-205ENST00000437425 H7BYZ3 331 aa11.99□□□□□ -0.49
SGCE-205ENST00000437425 TGOLN2O43493 480 aa11.99□□□□□ -0.49
SGCE-205ENST00000437425 ATF4P18848 351 aaPredicted RBP11.99□□□□□ -0.49
SGCE-205ENST00000437425 S100PP25815 95 aa11.99□□□□□ -0.49
SGCE-205ENST00000437425 CRYBB3P26998 211 aa11.99□□□□□ -0.49
SGCE-205ENST00000437425 MYCNOSP40205 109 aa11.99□□□□□ -0.49
SGCE-205ENST00000437425 CNN1P51911 297 aaKnown RBP11.99□□□□□ -0.49
SGCE-205ENST00000437425 Q6YL49 198 aa11.99□□□□□ -0.49
SGCE-205ENST00000437425 MAPK1IP1LQ8NDC0 245 aa11.99□□□□□ -0.49
SGCE-205ENST00000437425 C2CD4CQ8TF44 421 aa11.99□□□□□ -0.49
SGCE-205ENST00000437425 ISOC2Q96AB3 205 aa11.99□□□□□ -0.49
SGCE-205ENST00000437425 IMMP2LQ96T52 175 aa11.99□□□□□ -0.49
SGCE-205ENST00000437425 RABAC1Q9UI14 185 aa11.99□□□□□ -0.49
SGCE-205ENST00000437425 PRRC2AP48634 2157 aaKnown RBP11.98□□□□□ -0.49
SGCE-205ENST00000437425 A0A0G2JLM5 398 aa11.98□□□□□ -0.49
SGCE-205ENST00000437425 TMEM89A2RUT3 159 aa11.98□□□□□ -0.49
SGCE-205ENST00000437425 GNG4P50150 75 aa11.98□□□□□ -0.49
SGCE-205ENST00000437425 PDE6HQ13956 83 aa11.98□□□□□ -0.49
SGCE-205ENST00000437425 HIST2H2BCQ6DN03 193 aa11.98□□□□□ -0.49
SGCE-205ENST00000437425 ZNF329Q86UD4 541 aa11.98□□□□□ -0.49
SGCE-205ENST00000437425 FAM24BQ8N5W8 94 aa11.98□□□□□ -0.49
SGCE-205ENST00000437425 C5orf17Q8NAS9 161 aa11.98□□□□□ -0.49
SGCE-205ENST00000437425 SMIM12Q96EX1 92 aa11.98□□□□□ -0.49
SGCE-205ENST00000437425 YPEL4Q96NS1 127 aa11.98□□□□□ -0.49
SGCE-205ENST00000437425 DERL1Q9BUN8 251 aa11.98□□□□□ -0.49
SGCE-205ENST00000437425 ELOVL1Q9BW60 279 aa11.98□□□□□ -0.49
SGCE-205ENST00000437425 OTORQ9NRC9 128 aa11.98□□□□□ -0.49
SGCE-205ENST00000437425 CDC42EP3Q9UKI2 254 aa11.98□□□□□ -0.49
SGCE-205ENST00000437425 VPREB3Q9UKI3 123 aa11.98□□□□□ -0.49
SGCE-205ENST00000437425 NOTCH2Q04721 2471 aa11.97□□□□□ -0.49
SGCE-205ENST00000437425 MDFIC2A0A1B0GVS7 189 aa11.97□□□□□ -0.49
SGCE-205ENST00000437425 ZNF98A6NK75 572 aa11.97□□□□□ -0.49
SGCE-205ENST00000437425 SH2D7A6NKC9 451 aaPredicted RBP11.97□□□□□ -0.49
SGCE-205ENST00000437425 TRGV3P03979 118 aa11.97□□□□□ -0.49
SGCE-205ENST00000437425 CLEC3BP05452 202 aa11.97□□□□□ -0.49
SGCE-205ENST00000437425 RPL7P18124 248 aaKnown RBP11.97□□□□□ -0.49
SGCE-205ENST00000437425 RAB5AP20339 215 aa11.97□□□□□ -0.49
SGCE-205ENST00000437425 PPIFP30405 207 aaKnown RBP11.97□□□□□ -0.49
SGCE-205ENST00000437425 SRP14P37108 136 aaKnown RBP11.97□□□□□ -0.49
SGCE-205ENST00000437425 ELOBQ15370 118 aa11.97□□□□□ -0.49
SGCE-205ENST00000437425 GPR82Q96P67 336 aa11.97□□□□□ -0.49
SGCE-205ENST00000437425 MLXQ9UH92 298 aa11.97□□□□□ -0.49
SGCE-205ENST00000437425 SOX21Q9Y651 276 aaPredicted RBP11.97□□□□□ -0.49
SGCE-205ENST00000437425 PEX7O00628 323 aa11.96□□□□□ -0.49
SGCE-205ENST00000437425 GPR183P32249 361 aa11.96□□□□□ -0.49
SGCE-205ENST00000437425 RANP62826 216 aaKnown RBP11.96□□□□□ -0.49
SGCE-205ENST00000437425 FLI1Q01543 452 aaPredicted RBP11.96□□□□□ -0.49
SGCE-205ENST00000437425 USF2Q15853 346 aaPredicted RBP11.96□□□□□ -0.49
SGCE-205ENST00000437425 KCNIP4Q6PIL6 250 aa11.96□□□□□ -0.49
SGCE-205ENST00000437425 ARL6IP6Q8N6S5 226 aa11.96□□□□□ -0.49
SGCE-205ENST00000437425 EPDR1Q9UM22 224 aa11.96□□□□□ -0.49
SGCE-205ENST00000437425 S4R3C0 116 aa11.96□□□□□ -0.49
SGCE-205ENST00000437425 UNC79Q9P2D8 2635 aa11.96□□□□□ -0.49
SGCE-205ENST00000437425 TRBV24-1A0A075B6N3 115 aa11.96□□□□□ -0.5
SGCE-205ENST00000437425 PGPA6NDG6 321 aa11.96□□□□□ -0.5
SGCE-205ENST00000437425 IGHV4-59P01825 116 aa11.96□□□□□ -0.5
SGCE-205ENST00000437425 ADMP35318 185 aa11.96□□□□□ -0.5
SGCE-205ENST00000437425 BCL6BQ8N143 479 aaPredicted RBP11.96□□□□□ -0.5
SGCE-205ENST00000437425 BLNKQ8WV28 456 aa11.96□□□□□ -0.5
SGCE-205ENST00000437425 SFRP2Q96HF1 295 aa11.96□□□□□ -0.5
SGCE-205ENST00000437425 ATG101Q9BSB4 218 aa11.96□□□□□ -0.5
SGCE-205ENST00000437425 CHRDL1Q9BU40 450 aa11.96□□□□□ -0.5
SGCE-205ENST00000437425 CR1P17927 2039 aa11.95□□□□□ -0.5
SGCE-205ENST00000437425 TRBV20OR9-2A0A075B6H5 130 aa11.95□□□□□ -0.5
SGCE-205ENST00000437425 TRBV19A0A075B6N1 114 aa11.95□□□□□ -0.5
SGCE-205ENST00000437425 C1orf196B1AJZ1 125 aa11.95□□□□□ -0.5
SGCE-205ENST00000437425 IGLV1-40P01703 118 aa11.95□□□□□ -0.5
SGCE-205ENST00000437425 IGHV3-23P01764 117 aa11.95□□□□□ -0.5
SGCE-205ENST00000437425 SLC25A5P05141 298 aaKnown RBP11.95□□□□□ -0.5
SGCE-205ENST00000437425 CRYBA1P05813 215 aa11.95□□□□□ -0.5
SGCE-205ENST00000437425 IGLC2P0DOY2 106 aa11.95□□□□□ -0.5
SGCE-205ENST00000437425 TPPP2P59282 170 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms