RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 SELENOTP62341 195 aa5.4□□□□□ -1.54
LSM3P3-201ENST00000436601 ZNF616Q08AN1 781 aa5.4□□□□□ -1.54
LSM3P3-201ENST00000436601 TMEM41BQ5BJD5 291 aa5.4□□□□□ -1.54
LSM3P3-201ENST00000436601 SPSB3Q6PJ21 355 aa5.4□□□□□ -1.54
LSM3P3-201ENST00000436601 PATE2Q6UY27 113 aa5.4□□□□□ -1.54
LSM3P3-201ENST00000436601 ZNF767PQ75MW2 155 aa5.4□□□□□ -1.54
LSM3P3-201ENST00000436601 RPP25LQ8N5L8 163 aaKnown RBP5.4□□□□□ -1.54
LSM3P3-201ENST00000436601 C11orf44Q8N8P7 122 aa5.4□□□□□ -1.54
LSM3P3-201ENST00000436601 PCNPQ8WW12 178 aaKnown RBP5.4□□□□□ -1.54
LSM3P3-201ENST00000436601 TMEM37Q8WXS4 190 aa5.4□□□□□ -1.54
LSM3P3-201ENST00000436601 KCNIP2Q9NS61 270 aa5.4□□□□□ -1.54
LSM3P3-201ENST00000436601 RPRMQ9NS64 109 aa5.4□□□□□ -1.54
LSM3P3-201ENST00000436601 GAR1Q9NY12 217 aaKnown RBP5.4□□□□□ -1.54
LSM3P3-201ENST00000436601 PEF1Q9UBV8 284 aaKnown RBP5.4□□□□□ -1.54
LSM3P3-201ENST00000436601 UBQLN2Q9UHD9 624 aa5.4□□□□□ -1.54
LSM3P3-201ENST00000436601 HIVEP2P31629 2446 aa5.4□□□□□ -1.55
LSM3P3-201ENST00000436601 IGHV3-35A0A0C4DH35 117 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 KRTAP23-1A1A580 65 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 I3L521 148 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 EIF3GO75821 320 aaKnown RBP eCLIP5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 OR2C1O95371 312 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 FABP1P07148 127 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 ORM2P19652 201 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 M6PRP20645 277 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 RAB5CP51148 216 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 PLP1P60201 277 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 USF2Q15853 346 aaPredicted RBP5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 ZNF726P1Q15940 193 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 ACOT6Q3I5F7 207 aaPredicted RBP5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 KRTAP24-1Q3LI83 254 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 AKR1C8PQ5T2L2 129 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 FAM90A2PQ658T7 463 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 TOMM20LQ6UXN7 152 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 ZNF600Q6ZNG1 722 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 SSX7Q7RTT5 188 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 OR51G1Q8NGK1 321 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 OR10G4Q8NGN3 311 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 OR10G9Q8NGN4 311 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 OR10G7Q8NGN6 311 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 Q8WTZ3 238 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 CITED2Q99967 270 aaPredicted RBP5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 MRPL27Q9P0M9 148 aaKnown RBP5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 DOK5Q9P104 306 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 PUS1Q9Y606 427 aaKnown RBP eCLIP5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 MXRA5Q9NR99 2828 aa5.39□□□□□ -1.55
LSM3P3-201ENST00000436601 NAV3Q8IVL0 2385 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 TRGV11A0A075B6L2 103 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 IGHV4OR15-8A0A075B7B6 117 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 IGHV3OR16-8A0A075B7F1 116 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 A0A087WW49 117 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 A0A1B0GUS0 222 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 PGPEP1LA6NFU8 196 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 ZNF705EA8MWA4 302 aaPredicted RBP5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 SEC14L6B5MCN3 397 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 GGCTO75223 188 aaKnown RBP5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 HYPMO75409 117 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 SCGB2A1O75556 95 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 MBP02144 154 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 HSPB1P04792 205 aaKnown RBP5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 IL4P05112 153 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 NMBP08949 121 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 LYZP61626 148 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 RELQ04864 619 aaPredicted RBP5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 PXDC1Q5TGL8 231 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 MORN5Q5VZ52 161 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 SPATA31B1PQ5VZV4 182 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 FAM122CQ6P4D5 195 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 UNQ9165/PRO28630Q6UXU0 137 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 DPPA3Q6W0C5 159 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 Q6ZRG5 221 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 Q6ZSN1 163 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 OR1B1Q8NGR6 318 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 FAM213BQ8TBF2 198 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 GATAD1Q8WUU5 269 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 C4orf3Q8WVX3 66 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 RNF125Q96EQ8 232 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 DNAJC4Q9NNZ3 241 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 SONP18583 2426 aaKnown RBP5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 ANK3Q12955 4377 aaKnown RBP5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 TNCP24821 2201 aa5.38□□□□□ -1.55
LSM3P3-201ENST00000436601 TRAV5A0A0B4J249 113 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 NDUFA4O00483 81 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 HMGB3O15347 200 aaKnown RBP5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 COX7A2P2O60397 106 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 OR5G3P0C626 314 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 CCL20P78556 96 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 DEFB136Q30KP8 78 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 AWAT1Q58HT5 328 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 CLLU1Q5K131 121 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 FAM78BQ5VT40 261 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 C10orf113Q5VZT2 155 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 MIR17HGQ75NE6 70 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 GPHB5Q86YW7 130 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 KLHL30-AS1Q8NEE0 82 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 OR1L4Q8NGR5 311 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 OR1N2Q8NGR9 330 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 LRRC20Q8TCA0 184 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 MBD3L1Q8WWY6 194 aa5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 SAT2Q96F10 170 aaPredicted RBP5.37□□□□□ -1.55
LSM3P3-201ENST00000436601 DUX3Q96PT4 197 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms