RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 MRPL52Q86TS9 123 aaKnown RBP12.76□□□□□ -0.37
HLA-DQB2-231ENST00000435145 OR11H6Q8NGC7 330 aa12.76□□□□□ -0.37
HLA-DQB2-231ENST00000435145 TMEM190Q8WZ59 177 aa12.76□□□□□ -0.37
HLA-DQB2-231ENST00000435145 TMEM68Q96MH6 324 aa12.76□□□□□ -0.37
HLA-DQB2-231ENST00000435145 KALRNO60229 2985 aa12.76□□□□□ -0.37
HLA-DQB2-231ENST00000435145 IGKV1-17P01599 117 aa12.76□□□□□ -0.37
HLA-DQB2-231ENST00000435145 LEMD1Q68G75 181 aa12.76□□□□□ -0.37
HLA-DQB2-231ENST00000435145 LINC00322Q6ZN03 302 aaPredicted RBP12.76□□□□□ -0.37
HLA-DQB2-231ENST00000435145 NIT1Q86X76 327 aa12.76□□□□□ -0.37
HLA-DQB2-231ENST00000435145 VN1R17PQ8TDU5 208 aa12.76□□□□□ -0.37
HLA-DQB2-231ENST00000435145 OTORQ9NRC9 128 aa12.76□□□□□ -0.37
HLA-DQB2-231ENST00000435145 TIMM23O14925 209 aa12.75□□□□□ -0.37
HLA-DQB2-231ENST00000435145 RNF224P0DH78 156 aa12.75□□□□□ -0.37
HLA-DQB2-231ENST00000435145 HOXB4P17483 251 aaPredicted RBP12.75□□□□□ -0.37
HLA-DQB2-231ENST00000435145 CFHR4Q92496 578 aa12.75□□□□□ -0.37
HLA-DQB2-231ENST00000435145 RBM14Q96PK6 669 aaKnown RBP12.75□□□□□ -0.37
HLA-DQB2-231ENST00000435145 SLC25A39Q9BZJ4 359 aaPredicted RBP12.75□□□□□ -0.37
HLA-DQB2-231ENST00000435145 WNT10AQ9GZT5 417 aa12.75□□□□□ -0.37
HLA-DQB2-231ENST00000435145 RPP21Q9H633 154 aaKnown RBP12.75□□□□□ -0.37
HLA-DQB2-231ENST00000435145 K7EIM0 57 aa12.74□□□□□ -0.37
HLA-DQB2-231ENST00000435145 LYZP61626 148 aa12.74□□□□□ -0.37
HLA-DQB2-231ENST00000435145 SGK494Q96LW2 274 aa12.74□□□□□ -0.37
HLA-DQB2-231ENST00000435145 MIEN1Q9BRT3 115 aa12.74□□□□□ -0.37
HLA-DQB2-231ENST00000435145 FAM103A1Q9BTL3 118 aaKnown RBP12.74□□□□□ -0.37
HLA-DQB2-231ENST00000435145 VAMP8Q9BV40 100 aa12.74□□□□□ -0.37
HLA-DQB2-231ENST00000435145 TRBV6-1A0A0K0K1D8 114 aa12.74□□□□□ -0.37
HLA-DQB2-231ENST00000435145 M0R143 59 aa12.74□□□□□ -0.37
HLA-DQB2-231ENST00000435145 MMDQ15546 238 aa12.74□□□□□ -0.37
HLA-DQB2-231ENST00000435145 NPBQ8NG41 125 aa12.74□□□□□ -0.37
HLA-DQB2-231ENST00000435145 ALKBH7Q9BT30 221 aaPredicted RBP12.74□□□□□ -0.37
HLA-DQB2-231ENST00000435145 ONECUT1Q9UBC0 465 aa12.74□□□□□ -0.37
HLA-DQB2-231ENST00000435145 TLN1Q9Y490 2541 aaKnown RBP12.74□□□□□ -0.37
HLA-DQB2-231ENST00000435145 DIRC3C9JPN6 131 aa12.73□□□□□ -0.37
HLA-DQB2-231ENST00000435145 NPIPB6E9PJ23 425 aa12.73□□□□□ -0.37
HLA-DQB2-231ENST00000435145 NDUFA3O95167 84 aa12.73□□□□□ -0.37
HLA-DQB2-231ENST00000435145 PMCHP20382 165 aa12.73□□□□□ -0.37
HLA-DQB2-231ENST00000435145 HTR1DP28221 377 aa12.73□□□□□ -0.37
HLA-DQB2-231ENST00000435145 KRTDAPP60985 99 aa12.73□□□□□ -0.37
HLA-DQB2-231ENST00000435145 NUTF2P61970 127 aaKnown RBP12.73□□□□□ -0.37
HLA-DQB2-231ENST00000435145 RASL11BQ9BPW5 248 aa12.73□□□□□ -0.37
HLA-DQB2-231ENST00000435145 DPM3Q9P2X0 92 aa12.73□□□□□ -0.37
HLA-DQB2-231ENST00000435145 SOX21Q9Y651 276 aaPredicted RBP12.73□□□□□ -0.37
HLA-DQB2-231ENST00000435145 PTPRQQ9UMZ3 2332 aa12.73□□□□□ -0.37
HLA-DQB2-231ENST00000435145 A8MWL6 223 aa12.72□□□□□ -0.37
HLA-DQB2-231ENST00000435145 H3BTX0 84 aa12.72□□□□□ -0.37
HLA-DQB2-231ENST00000435145 IGLV2-11P01706 119 aa12.72□□□□□ -0.37
HLA-DQB2-231ENST00000435145 Q86TA4 180 aa12.72□□□□□ -0.37
HLA-DQB2-231ENST00000435145 OR4B1Q8NGF8 309 aa12.72□□□□□ -0.37
HLA-DQB2-231ENST00000435145 GFRA4Q9GZZ7 299 aa12.72□□□□□ -0.37
HLA-DQB2-231ENST00000435145 RPH3ALQ9UNE2 315 aa12.72□□□□□ -0.37
HLA-DQB2-231ENST00000435145 ODF3BA8MYP8 253 aa12.72□□□□□ -0.37
HLA-DQB2-231ENST00000435145 CCL21O00585 134 aa12.72□□□□□ -0.37
HLA-DQB2-231ENST00000435145 NBR2O15453 112 aa12.72□□□□□ -0.37
HLA-DQB2-231ENST00000435145 CTRLP40313 264 aa12.72□□□□□ -0.37
HLA-DQB2-231ENST00000435145 PLGLAQ15195 96 aa12.72□□□□□ -0.37
HLA-DQB2-231ENST00000435145 C16orf54Q6UWD8 224 aa12.72□□□□□ -0.37
HLA-DQB2-231ENST00000435145 GTSF1Q8WW33 167 aa12.72□□□□□ -0.37
HLA-DQB2-231ENST00000435145 SHANK2-AS3Q9BTD1 123 aa12.72□□□□□ -0.37
HLA-DQB2-231ENST00000435145 RAB1BQ9H0U4 201 aa12.72□□□□□ -0.37
HLA-DQB2-231ENST00000435145 PAM16Q9Y3D7 125 aa12.72□□□□□ -0.37
HLA-DQB2-231ENST00000435145 FAM231BA6NCW3 169 aa12.71□□□□□ -0.37
HLA-DQB2-231ENST00000435145 H3BRN7 92 aa12.71□□□□□ -0.37
HLA-DQB2-231ENST00000435145 M0R1W7 72 aa12.71□□□□□ -0.37
HLA-DQB2-231ENST00000435145 C3orf79P0CE67 100 aa12.71□□□□□ -0.37
HLA-DQB2-231ENST00000435145 ADORA2A-AS1P86434 159 aa12.71□□□□□ -0.37
HLA-DQB2-231ENST00000435145 CDSNQ15517 529 aa12.71□□□□□ -0.37
HLA-DQB2-231ENST00000435145 TCF24Q7RTU0 167 aa12.71□□□□□ -0.37
HLA-DQB2-231ENST00000435145 MSRB2Q9Y3D2 182 aa12.71□□□□□ -0.37
HLA-DQB2-231ENST00000435145 A6NNC1 897 aa12.71□□□□□ -0.38
HLA-DQB2-231ENST00000435145 CNIH1O95406 144 aa12.71□□□□□ -0.38
HLA-DQB2-231ENST00000435145 P01737 135 aa12.71□□□□□ -0.38
HLA-DQB2-231ENST00000435145 HBBP68871 147 aa12.71□□□□□ -0.38
HLA-DQB2-231ENST00000435145 C11orf71Q6IPW1 123 aa12.71□□□□□ -0.38
HLA-DQB2-231ENST00000435145 SPTBN2O15020 2390 aa12.71□□□□□ -0.38
HLA-DQB2-231ENST00000435145 IGLC2P0DOY2 106 aa12.7□□□□□ -0.38
HLA-DQB2-231ENST00000435145 FAM19A2Q8N3H0 131 aa12.7□□□□□ -0.38
HLA-DQB2-231ENST00000435145 SSBP4Q9BWG4 385 aaPredicted RBP12.7□□□□□ -0.38
HLA-DQB2-231ENST00000435145 ANKHD1Q8IWZ3 2542 aaKnown RBP12.7□□□□□ -0.38
HLA-DQB2-231ENST00000435145 TRBV19A0A075B6N1 114 aa12.69□□□□□ -0.38
HLA-DQB2-231ENST00000435145 LY6HO94772 140 aa12.69□□□□□ -0.38
HLA-DQB2-231ENST00000435145 PRTN3P24158 256 aa12.69□□□□□ -0.38
HLA-DQB2-231ENST00000435145 CEACAM3P40198 252 aa12.69□□□□□ -0.38
HLA-DQB2-231ENST00000435145 CAMPP49913 170 aa12.69□□□□□ -0.38
HLA-DQB2-231ENST00000435145 ARF6P62330 175 aa12.69□□□□□ -0.38
HLA-DQB2-231ENST00000435145 TIMD4Q96H15 378 aa12.69□□□□□ -0.38
HLA-DQB2-231ENST00000435145 RNF24Q9Y225 148 aa12.69□□□□□ -0.38
HLA-DQB2-231ENST00000435145 CEP295Q9C0D2 2601 aa12.69□□□□□ -0.38
HLA-DQB2-231ENST00000435145 ZNF785A8K8V0 405 aa12.69□□□□□ -0.38
HLA-DQB2-231ENST00000435145 M0QZK8 103 aa12.69□□□□□ -0.38
HLA-DQB2-231ENST00000435145 OVOL3O00110 214 aa12.69□□□□□ -0.38
HLA-DQB2-231ENST00000435145 MRPS12O15235 138 aaKnown RBP12.69□□□□□ -0.38
HLA-DQB2-231ENST00000435145 ZNF705AQ6ZN79 300 aaPredicted RBP12.69□□□□□ -0.38
HLA-DQB2-231ENST00000435145 RBPMS2Q6ZRY4 209 aaKnown RBP12.69□□□□□ -0.38
HLA-DQB2-231ENST00000435145 EXOC3-AS1Q8N2X6 119 aa12.69□□□□□ -0.38
HLA-DQB2-231ENST00000435145 ZNF491Q8N8L2 437 aa12.69□□□□□ -0.38
HLA-DQB2-231ENST00000435145 TRAV8-1A0A0A6YYK1 113 aa12.68□□□□□ -0.38
HLA-DQB2-231ENST00000435145 WI2-2373I1.2A0A1W2PRP0 233 aa12.68□□□□□ -0.38
HLA-DQB2-231ENST00000435145 GPR6P46095 362 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQB2-231ENST00000435145 LYPD1Q8N2G4 141 aa12.68□□□□□ -0.38
HLA-DQB2-231ENST00000435145 ZNF48Q96MX3 618 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms