RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 LPAL2Q16609 132 aa9.29□□□□□ -0.92
HMGCS1-202ENST00000433297 PCP2Q8IVA1 136 aa9.29□□□□□ -0.92
HMGCS1-202ENST00000433297 EXOC3-AS1Q8N2X6 119 aa9.29□□□□□ -0.92
HMGCS1-202ENST00000433297 CCL13Q99616 98 aa9.29□□□□□ -0.92
HMGCS1-202ENST00000433297 TCRAP04437 139 aa9.29□□□□□ -0.92
HMGCS1-202ENST00000433297 CFHR2P36980 270 aa9.29□□□□□ -0.92
HMGCS1-202ENST00000433297 LGALS7P47929 136 aa9.29□□□□□ -0.92
HMGCS1-202ENST00000433297 WT1-ASQ06250 92 aa9.29□□□□□ -0.92
HMGCS1-202ENST00000433297 MLST8Q9BVC4 326 aa9.29□□□□□ -0.92
HMGCS1-202ENST00000433297 PRSS22Q9GZN4 317 aa9.29□□□□□ -0.92
HMGCS1-202ENST00000433297 PPIAL4CA0A0B4J2A2 164 aa9.29□□□□□ -0.92
HMGCS1-202ENST00000433297 PPIAL4GP0DN37 164 aa9.29□□□□□ -0.92
HMGCS1-202ENST00000433297 FABP2P12104 132 aa9.29□□□□□ -0.92
HMGCS1-202ENST00000433297 RUSC1-AS1Q66K80 236 aa9.29□□□□□ -0.92
HMGCS1-202ENST00000433297 TMEM108Q6UXF1 575 aa9.29□□□□□ -0.92
HMGCS1-202ENST00000433297 NPFFR1Q9GZQ6 430 aa9.29□□□□□ -0.92
HMGCS1-202ENST00000433297 A0A1B0GUT8 65 aa9.28□□□□□ -0.92
HMGCS1-202ENST00000433297 TEX48A0A1B0GUV7 120 aa9.28□□□□□ -0.92
HMGCS1-202ENST00000433297 K7EMI3 77 aa9.28□□□□□ -0.92
HMGCS1-202ENST00000433297 AZU1P20160 251 aa9.28□□□□□ -0.92
HMGCS1-202ENST00000433297 MAFAQ8NHW3 353 aaPredicted RBP9.28□□□□□ -0.92
HMGCS1-202ENST00000433297 MRPL20Q9BYC9 149 aaKnown RBP9.28□□□□□ -0.92
HMGCS1-202ENST00000433297 PILRBQ9UKJ0 227 aa9.28□□□□□ -0.92
HMGCS1-202ENST00000433297 SOX21Q9Y651 276 aaPredicted RBP9.28□□□□□ -0.92
HMGCS1-202ENST00000433297 A0A1W2PPM0 123 aa9.28□□□□□ -0.92
HMGCS1-202ENST00000433297 FAM216BQ8N7L0 139 aa9.28□□□□□ -0.92
HMGCS1-202ENST00000433297 INTS1Q8N201 2190 aaKnown RBP9.28□□□□□ -0.92
HMGCS1-202ENST00000433297 RP1L1Q8IWN7 2480 aaPredicted RBP9.28□□□□□ -0.92
HMGCS1-202ENST00000433297 IGKV1D-37A0A075B6S9 117 aa9.28□□□□□ -0.92
HMGCS1-202ENST00000433297 C19orf71A6NCJ1 209 aa9.28□□□□□ -0.92
HMGCS1-202ENST00000433297 ZADH2Q8N4Q0 377 aa9.28□□□□□ -0.92
HMGCS1-202ENST00000433297 FMC1Q96HJ9 113 aa9.28□□□□□ -0.92
HMGCS1-202ENST00000433297 NDUFA4L2Q9NRX3 87 aa9.28□□□□□ -0.92
HMGCS1-202ENST00000433297 LOC400499M0QZD8 3231 aa9.27□□□□□ -0.93
HMGCS1-202ENST00000433297 A0A1W2PRD5 423 aa9.27□□□□□ -0.93
HMGCS1-202ENST00000433297 A0A1W2PRF3 423 aa9.27□□□□□ -0.93
HMGCS1-202ENST00000433297 A0A1W2PRM7 423 aa9.27□□□□□ -0.93
HMGCS1-202ENST00000433297 SAMD5Q5TGI4 173 aa9.27□□□□□ -0.93
HMGCS1-202ENST00000433297 DHRS13Q6UX07 377 aa9.27□□□□□ -0.93
HMGCS1-202ENST00000433297 C18orf15Q96N68 181 aa9.27□□□□□ -0.93
HMGCS1-202ENST00000433297 ROS1P08922 2347 aa9.27□□□□□ -0.93
HMGCS1-202ENST00000433297 SMAD7O15105 426 aaKnown RBP9.27□□□□□ -0.93
HMGCS1-202ENST00000433297 LTAP01374 205 aa9.27□□□□□ -0.93
HMGCS1-202ENST00000433297 FGF6P10767 208 aa9.27□□□□□ -0.93
HMGCS1-202ENST00000433297 SUB1P53999 127 aaKnown RBP eCLIP9.27□□□□□ -0.931e-8■■■■□ 20.9
HMGCS1-202ENST00000433297 TIMM23BQ5SRD1 257 aa9.27□□□□□ -0.93
HMGCS1-202ENST00000433297 ATP1A1-AS1Q5TC04 95 aa9.27□□□□□ -0.93
HMGCS1-202ENST00000433297 Q6ZT83 130 aa9.27□□□□□ -0.93
HMGCS1-202ENST00000433297 NEGR1Q7Z3B1 354 aa9.27□□□□□ -0.93
HMGCS1-202ENST00000433297 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.27□□□□□ -0.93
HMGCS1-202ENST00000433297 TTTY13Q9BZ97 58 aa9.27□□□□□ -0.93
HMGCS1-202ENST00000433297 SIT1Q9Y3P8 196 aa9.27□□□□□ -0.93
HMGCS1-202ENST00000433297 MYCNOSP40205 109 aa9.26□□□□□ -0.93
HMGCS1-202ENST00000433297 HSD52Q0P140 79 aa9.26□□□□□ -0.93
HMGCS1-202ENST00000433297 POU2AF1Q16633 256 aa9.26□□□□□ -0.93
HMGCS1-202ENST00000433297 STXBP6Q8NFX7 210 aa9.26□□□□□ -0.93
HMGCS1-202ENST00000433297 CLUHP3Q96NS8 147 aa9.26□□□□□ -0.93
HMGCS1-202ENST00000433297 PCSK5Q92824 1860 aa9.26□□□□□ -0.93
HMGCS1-202ENST00000433297 K7ERJ3 54 aa9.26□□□□□ -0.93
HMGCS1-202ENST00000433297 ENSAO43768 121 aaKnown RBP9.26□□□□□ -0.93
HMGCS1-202ENST00000433297 IGKV3-15P01624 115 aa9.26□□□□□ -0.93
HMGCS1-202ENST00000433297 MZT1Q08AG7 82 aa9.26□□□□□ -0.93
HMGCS1-202ENST00000433297 RIGQ13278 110 aa9.26□□□□□ -0.93
HMGCS1-202ENST00000433297 MSMPQ1L6U9 139 aa9.26□□□□□ -0.93
HMGCS1-202ENST00000433297 OR5AN1Q8NGI8 311 aa9.26□□□□□ -0.93
HMGCS1-202ENST00000433297 KLF12Q9Y4X4 402 aa9.26□□□□□ -0.93
HMGCS1-202ENST00000433297 D6R8Y8 96 aa9.26□□□□□ -0.93
HMGCS1-202ENST00000433297 HAX1O00165 279 aa9.26□□□□□ -0.93
HMGCS1-202ENST00000433297 LYZP61626 148 aa9.26□□□□□ -0.93
HMGCS1-202ENST00000433297 MAP1BP46821 2468 aaKnown RBP9.26□□□□□ -0.93
HMGCS1-202ENST00000433297 IGHV3-72A0A0B4J1Y9 119 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 CGB3P0DN86 165 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 CGB7P0DN87 165 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 DIAPH2-AS1Q14236 149 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 CR1LQ2VPA4 569 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 RAB9BQ9NP90 201 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 C22orf46C9J442 243 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 SLC25A17O43808 307 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 SMIM13P0DJ93 91 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 CT83Q5H943 113 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 PMS2CLQ68D20 193 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 BOD1L2Q8IYS8 172 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 MTURNQ8N3F0 131 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 ZNF414Q96IQ9 312 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 SIGMAR1Q99720 223 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 GFRA4Q9GZZ7 299 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 INSIG2Q9Y5U4 225 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 IGHV1-18A0A0C4DH31 117 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 FSTL3O95633 263 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 FCGR2BP31994 310 aaPredicted RBP9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 ATP5IP56385 69 aaPredicted RBP9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 PSG3Q16557 428 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 OR5A1Q8NGJ0 315 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 TNFRSF14Q92956 283 aa9.25□□□□□ -0.93
HMGCS1-202ENST00000433297 M0R1B8 84 aa9.24□□□□□ -0.93
HMGCS1-202ENST00000433297 Q86TA4 180 aa9.24□□□□□ -0.93
HMGCS1-202ENST00000433297 BCL6BQ8N143 479 aaPredicted RBP9.24□□□□□ -0.93
HMGCS1-202ENST00000433297 SIGLEC8Q9NYZ4 499 aa9.24□□□□□ -0.93
HMGCS1-202ENST00000433297 ZNF492Q9P255 531 aa9.24□□□□□ -0.93
HMGCS1-202ENST00000433297 TSSC4Q9Y5U2 329 aaPredicted RBP9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms