RNA–Protein interactions for RNA: ENST00000429650.1

SNRNP200-202, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 2,637 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-202ENST00000429650 TRGV9Q99603 122 aa10.66□□□□□ -0.7
SNRNP200-202ENST00000429650 SLC25A5P05141 298 aaKnown RBP10.66□□□□□ -0.7
SNRNP200-202ENST00000429650 CNTFRP26992 372 aa10.66□□□□□ -0.7
SNRNP200-202ENST00000429650 RPL27AP46776 148 aaKnown RBP10.66□□□□□ -0.7
SNRNP200-202ENST00000429650 PRB3Q04118 309 aaPredicted RBP10.66□□□□□ -0.7
SNRNP200-202ENST00000429650 TNXAQ16473 311 aa10.66□□□□□ -0.7
SNRNP200-202ENST00000429650 NIT1Q86X76 327 aa10.66□□□□□ -0.7
SNRNP200-202ENST00000429650 C18orf32Q8TCD1 76 aa10.66□□□□□ -0.7
SNRNP200-202ENST00000429650 TSKUQ8WUA8 353 aa10.66□□□□□ -0.7
SNRNP200-202ENST00000429650 MALRD1Q5VYJ5 2156 aa10.65□□□□□ -0.7
SNRNP200-202ENST00000429650 CRYGBP07316 175 aa10.65□□□□□ -0.7
SNRNP200-202ENST00000429650 APELAP0DMC3 54 aa10.65□□□□□ -0.7
SNRNP200-202ENST00000429650 DLX1P56177 255 aa10.65□□□□□ -0.7
SNRNP200-202ENST00000429650 UBE2G1P62253 170 aa10.65□□□□□ -0.7
SNRNP200-202ENST00000429650 ABCA4P78363 2273 aa10.65□□□□□ -0.7
SNRNP200-202ENST00000429650 SCGB2A2Q13296 93 aa10.65□□□□□ -0.7
SNRNP200-202ENST00000429650 SPACA3Q8IXA5 215 aa10.65□□□□□ -0.7
SNRNP200-202ENST00000429650 OR4B1Q8NGF8 309 aa10.65□□□□□ -0.7
SNRNP200-202ENST00000429650 CHRDL1Q9BU40 450 aa10.65□□□□□ -0.7
SNRNP200-202ENST00000429650 PGPA6NDG6 321 aa10.65□□□□□ -0.71
SNRNP200-202ENST00000429650 HIST1H1EP10412 219 aaKnown RBP10.65□□□□□ -0.71
SNRNP200-202ENST00000429650 DMRTA1Q5VZB9 504 aa10.65□□□□□ -0.71
SNRNP200-202ENST00000429650 FAM19A2Q8N3H0 131 aa10.65□□□□□ -0.71
SNRNP200-202ENST00000429650 TMEM116Q8NCL8 245 aa10.65□□□□□ -0.71
SNRNP200-202ENST00000429650 PRSS33Q8NF86 280 aa10.65□□□□□ -0.71
SNRNP200-202ENST00000429650 RNASE8Q8TDE3 154 aaKnown RBP10.65□□□□□ -0.71
SNRNP200-202ENST00000429650 SGK494Q96LW2 274 aa10.65□□□□□ -0.71
SNRNP200-202ENST00000429650 TMEM208Q9BTX3 173 aa10.65□□□□□ -0.71
SNRNP200-202ENST00000429650 ZNF835Q9Y2P0 537 aa10.65□□□□□ -0.71
SNRNP200-202ENST00000429650 KLF12Q9Y4X4 402 aa10.65□□□□□ -0.71
SNRNP200-202ENST00000429650 ZFHX3Q15911 3703 aa10.64□□□□□ -0.71
SNRNP200-202ENST00000429650 IGHV3-21A0A0B4J1V1 117 aa10.64□□□□□ -0.71
SNRNP200-202ENST00000429650 IGHV1-69-2A0A0G2JMI3 117 aa10.64□□□□□ -0.71
SNRNP200-202ENST00000429650 HIGD1CA8MV81 97 aa10.64□□□□□ -0.71
SNRNP200-202ENST00000429650 CORTO00230 105 aa10.64□□□□□ -0.71
SNRNP200-202ENST00000429650 NBEAP1P0C6P0 100 aa10.64□□□□□ -0.71
SNRNP200-202ENST00000429650 MRPL27Q9P0M9 148 aaKnown RBP10.64□□□□□ -0.71
SNRNP200-202ENST00000429650 SIGLEC9Q9Y336 463 aa10.64□□□□□ -0.71
SNRNP200-202ENST00000429650 IGF2RP11717 2491 aa10.64□□□□□ -0.71
SNRNP200-202ENST00000429650 IGHV2-26A0A0B4J1V2 119 aa10.64□□□□□ -0.71
SNRNP200-202ENST00000429650 C3orf79P0CE67 100 aa10.64□□□□□ -0.71
SNRNP200-202ENST00000429650 SMIM12Q96EX1 92 aa10.64□□□□□ -0.71
SNRNP200-202ENST00000429650 CITED1Q99966 193 aa10.64□□□□□ -0.71
SNRNP200-202ENST00000429650 VWC2LB2RUY7 222 aa10.63□□□□□ -0.71
SNRNP200-202ENST00000429650 H0Y8G0 127 aa10.63□□□□□ -0.71
SNRNP200-202ENST00000429650 HYPMO75409 117 aa10.63□□□□□ -0.71
SNRNP200-202ENST00000429650 IGLV1-47P01700 117 aa10.63□□□□□ -0.71
SNRNP200-202ENST00000429650 GP9P14770 177 aa10.63□□□□□ -0.71
SNRNP200-202ENST00000429650 CTRLP40313 264 aa10.63□□□□□ -0.71
SNRNP200-202ENST00000429650 TCF15Q12870 199 aa10.63□□□□□ -0.71
SNRNP200-202ENST00000429650 DPF1Q92782 380 aa10.63□□□□□ -0.71
SNRNP200-202ENST00000429650 GPR82Q96P67 336 aa10.63□□□□□ -0.71
SNRNP200-202ENST00000429650 MLST8Q9BVC4 326 aa10.63□□□□□ -0.71
SNRNP200-202ENST00000429650 NGBQ9NPG2 151 aa10.63□□□□□ -0.71
SNRNP200-202ENST00000429650 HIF1ANQ9NWT6 349 aa10.63□□□□□ -0.71
SNRNP200-202ENST00000429650 FAM87AP0C7U9 286 aa10.63□□□□□ -0.71
SNRNP200-202ENST00000429650 CSTL1Q9H114 145 aa10.63□□□□□ -0.71
SNRNP200-202ENST00000429650 IGHV1-3A0A0C4DH29 117 aa10.62□□□□□ -0.71
SNRNP200-202ENST00000429650 OR2J3O76001 311 aa10.62□□□□□ -0.71
SNRNP200-202ENST00000429650 NTF3P20783 257 aa10.62□□□□□ -0.71
SNRNP200-202ENST00000429650 C5orf17Q8NAS9 161 aa10.62□□□□□ -0.71
SNRNP200-202ENST00000429650 A0A1B0GXF2 115 aa10.62□□□□□ -0.71
SNRNP200-202ENST00000429650 CA7P43166 264 aa10.62□□□□□ -0.71
SNRNP200-202ENST00000429650 PLP1P60201 277 aa10.62□□□□□ -0.71
SNRNP200-202ENST00000429650 PAX2Q02962 417 aa10.62□□□□□ -0.71
SNRNP200-202ENST00000429650 KLF5Q13887 457 aaPredicted RBP10.62□□□□□ -0.71
SNRNP200-202ENST00000429650 LEMD1Q68G75 181 aa10.62□□□□□ -0.71
SNRNP200-202ENST00000429650 LINC00322Q6ZN03 302 aaPredicted RBP10.62□□□□□ -0.71
SNRNP200-202ENST00000429650 ATP5L2Q7Z4Y8 100 aa10.62□□□□□ -0.71
SNRNP200-202ENST00000429650 C8orf46Q8TAG6 207 aa10.62□□□□□ -0.71
SNRNP200-202ENST00000429650 CITED2Q99967 270 aaPredicted RBP10.62□□□□□ -0.71
SNRNP200-202ENST00000429650 SSBP4Q9BWG4 385 aaPredicted RBP10.62□□□□□ -0.71
SNRNP200-202ENST00000429650 RALYQ9UKM9 306 aaKnown RBP10.62□□□□□ -0.71
SNRNP200-202ENST00000429650 INSIG2Q9Y5U4 225 aa10.62□□□□□ -0.71
SNRNP200-202ENST00000429650 F11RQ9Y624 299 aaKnown RBP10.62□□□□□ -0.71
SNRNP200-202ENST00000429650 TEX22C9J3V5 150 aa10.61□□□□□ -0.71
SNRNP200-202ENST00000429650 TOMM40O96008 361 aa10.61□□□□□ -0.71
SNRNP200-202ENST00000429650 RPLP1P05386 114 aaKnown RBP10.61□□□□□ -0.71
SNRNP200-202ENST00000429650 GPR6P46095 362 aaPredicted RBP10.61□□□□□ -0.71
SNRNP200-202ENST00000429650 CAMPP49913 170 aa10.61□□□□□ -0.71
SNRNP200-202ENST00000429650 SPATA45Q537H7 98 aa10.61□□□□□ -0.71
SNRNP200-202ENST00000429650 PRR30Q53SZ7 412 aaPredicted RBP10.61□□□□□ -0.71
SNRNP200-202ENST00000429650 PPP1R27Q86WC6 154 aa10.61□□□□□ -0.71
SNRNP200-202ENST00000429650 ALKBH7Q9BT30 221 aaPredicted RBP10.61□□□□□ -0.71
SNRNP200-202ENST00000429650 CBY3A6NI87 242 aa10.61□□□□□ -0.71
SNRNP200-202ENST00000429650 BUB1B-PAK6H3BSN5 160 aa10.61□□□□□ -0.71
SNRNP200-202ENST00000429650 H3BTX0 84 aa10.61□□□□□ -0.71
SNRNP200-202ENST00000429650 LTAP01374 205 aa10.61□□□□□ -0.71
SNRNP200-202ENST00000429650 TCF24Q7RTU0 167 aa10.61□□□□□ -0.71
SNRNP200-202ENST00000429650 BORCS7Q96B45 105 aa10.61□□□□□ -0.71
SNRNP200-202ENST00000429650 FMC1Q96HJ9 113 aa10.61□□□□□ -0.71
SNRNP200-202ENST00000429650 Q9H3A6 140 aa10.61□□□□□ -0.71
SNRNP200-202ENST00000429650 RPP21Q9H633 154 aaKnown RBP10.61□□□□□ -0.71
SNRNP200-202ENST00000429650 LYNX1G3V0Z9 82 aa10.6□□□□□ -0.71
SNRNP200-202ENST00000429650 PPBPP02775 128 aa10.6□□□□□ -0.71
SNRNP200-202ENST00000429650 TCRAP04437 139 aa10.6□□□□□ -0.71
SNRNP200-202ENST00000429650 LYNX1P0DP58 116 aa10.6□□□□□ -0.71
SNRNP200-202ENST00000429650 CLEC7AQ9BXN2 247 aa10.6□□□□□ -0.71
SNRNP200-202ENST00000429650 PRSS22Q9GZN4 317 aa10.6□□□□□ -0.71
SNRNP200-202ENST00000429650 MED13LQ71F56 2210 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms