RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 MRPL27Q9P0M9 148 aaKnown RBP8.17□□□□□ -1.1
HDAC9-210ENST00000428307 CSPG4Q6UVK1 2322 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 IGHV3-35A0A0C4DH35 117 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 OR2T8A6NH00 312 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 AP4M1O00189 453 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 PPP1R2P9O14990 202 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 MGST1P10620 155 aaKnown RBP8.17□□□□□ -1.1
HDAC9-210ENST00000428307 GP9P14770 177 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 SRP14P37108 136 aaKnown RBP8.17□□□□□ -1.1
HDAC9-210ENST00000428307 MAPK1IP1LQ8NDC0 245 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 RNF125Q96EQ8 232 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 PYGO2Q9BRQ0 406 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 FBXL7Q9UJT9 491 aa8.17□□□□□ -1.1
HDAC9-210ENST00000428307 NAV2Q8IVL1 2488 aa8.16□□□□□ -1.1
HDAC9-210ENST00000428307 F8W735 103 aaPredicted RBP8.16□□□□□ -1.1
HDAC9-210ENST00000428307 SLC25A5P05141 298 aaKnown RBP8.16□□□□□ -1.1
HDAC9-210ENST00000428307 FABP1P07148 127 aa8.16□□□□□ -1.1
HDAC9-210ENST00000428307 TRGC1P0CF51 173 aa8.16□□□□□ -1.1
HDAC9-210ENST00000428307 PIFOQ8TCI5 191 aa8.16□□□□□ -1.1
HDAC9-210ENST00000428307 RNASE7Q9H1E1 156 aaKnown RBP8.16□□□□□ -1.1
HDAC9-210ENST00000428307 LINC00527Q9UJ94 153 aa8.16□□□□□ -1.1
HDAC9-210ENST00000428307 ZANQ9Y493 2812 aa8.16□□□□□ -1.1
HDAC9-210ENST00000428307 IGHV3OR16-8A0A075B7F1 116 aa8.15□□□□□ -1.1
HDAC9-210ENST00000428307 PEX7O00628 323 aa8.15□□□□□ -1.1
HDAC9-210ENST00000428307 ISLRO14498 428 aa8.15□□□□□ -1.1
HDAC9-210ENST00000428307 GGCTO75223 188 aaKnown RBP8.15□□□□□ -1.1
HDAC9-210ENST00000428307 PRB4P10163 310 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-210ENST00000428307 FCGR2BP31994 310 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-210ENST00000428307 LY6EQ16553 131 aa8.15□□□□□ -1.1
HDAC9-210ENST00000428307 MS4A10Q96PG2 267 aa8.15□□□□□ -1.1
HDAC9-210ENST00000428307 SRD5A3Q9H8P0 318 aa8.15□□□□□ -1.1
HDAC9-210ENST00000428307 ANKRD17O75179 2603 aaKnown RBP8.15□□□□□ -1.1
HDAC9-210ENST00000428307 ZNF320A2RRD8 509 aa8.15□□□□□ -1.1
HDAC9-210ENST00000428307 UBE2CO00762 179 aa8.15□□□□□ -1.1
HDAC9-210ENST00000428307 TOMM40O96008 361 aa8.15□□□□□ -1.1
HDAC9-210ENST00000428307 AVPP01185 164 aa8.15□□□□□ -1.1
HDAC9-210ENST00000428307 IGLV2-8P01709 118 aa8.15□□□□□ -1.1
HDAC9-210ENST00000428307 MYCNOSP40205 109 aa8.15□□□□□ -1.1
HDAC9-210ENST00000428307 CNN1P51911 297 aaKnown RBP8.15□□□□□ -1.1
HDAC9-210ENST00000428307 KRTAP10-9P60411 292 aa8.15□□□□□ -1.1
HDAC9-210ENST00000428307 USF2Q15853 346 aaPredicted RBP8.15□□□□□ -1.1
HDAC9-210ENST00000428307 C5orf56Q8N8D9 126 aa8.15□□□□□ -1.1
HDAC9-210ENST00000428307 ZNF586Q9NXT0 402 aa8.15□□□□□ -1.1
HDAC9-210ENST00000428307 EPDR1Q9UM22 224 aa8.15□□□□□ -1.1
HDAC9-210ENST00000428307 LY96Q9Y6Y9 160 aa8.15□□□□□ -1.1
HDAC9-210ENST00000428307 CHD6Q8TD26 2715 aa8.15□□□□□ -1.11
HDAC9-210ENST00000428307 TRAV30A0A087WSZ9 112 aa8.14□□□□□ -1.11
HDAC9-210ENST00000428307 B4DSR2 109 aa8.14□□□□□ -1.11
HDAC9-210ENST00000428307 CTSGP08311 255 aa8.14□□□□□ -1.11
HDAC9-210ENST00000428307 FOXL1Q12952 345 aa8.14□□□□□ -1.11
HDAC9-210ENST00000428307 C15orf32Q32M92 178 aa8.14□□□□□ -1.11
HDAC9-210ENST00000428307 C9orf152Q5JTZ5 239 aa8.14□□□□□ -1.11
HDAC9-210ENST00000428307 BAGE2Q86Y30 109 aa8.14□□□□□ -1.11
HDAC9-210ENST00000428307 IGF2BP2-AS1Q96M15 143 aa8.14□□□□□ -1.11
HDAC9-210ENST00000428307 C17orf77Q96MU5 243 aa8.14□□□□□ -1.11
HDAC9-210ENST00000428307 CHRDL1Q9BU40 450 aa8.14□□□□□ -1.11
HDAC9-210ENST00000428307 Q9H3A6 140 aa8.14□□□□□ -1.11
HDAC9-210ENST00000428307 CDC42EP3Q9UKI2 254 aa8.14□□□□□ -1.11
HDAC9-210ENST00000428307 PHOX2AO14813 284 aa8.14□□□□□ -1.11
HDAC9-210ENST00000428307 YPEL3P61236 119 aaPredicted RBP8.14□□□□□ -1.11
HDAC9-210ENST00000428307 RHOGP84095 191 aa8.14□□□□□ -1.11
HDAC9-210ENST00000428307 PDZD11Q5EBL8 140 aa8.14□□□□□ -1.11
HDAC9-210ENST00000428307 EXOC3-AS1Q8N2X6 119 aa8.14□□□□□ -1.11
HDAC9-210ENST00000428307 SHANK2-AS3Q9BTD1 123 aa8.14□□□□□ -1.11
HDAC9-210ENST00000428307 WI2-2373I1.2A0A1W2PRP0 233 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 AMY1AP04745 511 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 HIST1H1BP16401 226 aaKnown RBP8.13□□□□□ -1.11
HDAC9-210ENST00000428307 GFI1BQ5VTD9 330 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 BPIFA4PQ86YQ2 179 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 LINC00518Q8N0U6 118 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 FAM110DQ8TAY7 271 aaPredicted RBP8.13□□□□□ -1.11
HDAC9-210ENST00000428307 SERTAD4Q9NUC0 356 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 V9GYV3 84 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 ZNF98A6NK75 572 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 H3BUX3 64 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 TGOLN2O43493 480 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 GCGP01275 180 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 CLEC3BP05452 202 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 HIST1H1EP10412 219 aaKnown RBP8.13□□□□□ -1.11
HDAC9-210ENST00000428307 GPR183P32249 361 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 ADMP35318 185 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 TAS2R60P59551 318 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 UBE2G1P62253 170 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 PRR27Q6MZM9 219 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 TMEM68Q96MH6 324 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 IMMP2LQ96T52 175 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 MEGF9Q9H1U4 602 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 IL36BQ9NZH7 164 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 MOB4Q9Y3A3 225 aa8.13□□□□□ -1.11
HDAC9-210ENST00000428307 H3BRN7 92 aa8.12□□□□□ -1.11
HDAC9-210ENST00000428307 SPINK4O60575 86 aa8.12□□□□□ -1.11
HDAC9-210ENST00000428307 CA1P00915 261 aaPredicted RBP8.12□□□□□ -1.11
HDAC9-210ENST00000428307 TCL1AP56279 114 aa8.12□□□□□ -1.11
HDAC9-210ENST00000428307 DSCR9P59020 149 aa8.12□□□□□ -1.11
HDAC9-210ENST00000428307 SLC35B1P78383 322 aa8.12□□□□□ -1.11
HDAC9-210ENST00000428307 IBA57Q5T440 356 aaKnown RBP8.12□□□□□ -1.11
HDAC9-210ENST00000428307 C5orf17Q8NAS9 161 aa8.12□□□□□ -1.11
HDAC9-210ENST00000428307 TMEM14CQ9P0S9 112 aa8.12□□□□□ -1.11
HDAC9-210ENST00000428307 FRMD6-AS1P0C7T7 363 aa8.12□□□□□ -1.11
HDAC9-210ENST00000428307 HOXA5P20719 270 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms