RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 C1orf194Q5T5A4 169 aa13.33□□□□□ -0.28
PSPC1-202ENST00000427943 LINC00052Q96N35 136 aa13.33□□□□□ -0.28
PSPC1-202ENST00000427943 XCL2Q9UBD3 114 aa13.33□□□□□ -0.28
PSPC1-202ENST00000427943 HLA-DRB4X5D2U9 266 aa13.33□□□□□ -0.28
PSPC1-202ENST00000427943 CENPXA8MT69 81 aa13.32□□□□□ -0.28
PSPC1-202ENST00000427943 SOCS3O14543 225 aa13.32□□□□□ -0.28
PSPC1-202ENST00000427943 SSSCA1O60232 199 aa13.32□□□□□ -0.28
PSPC1-202ENST00000427943 NUTF2P61970 127 aaKnown RBP13.32□□□□□ -0.28
PSPC1-202ENST00000427943 ID3Q02535 119 aa13.32□□□□□ -0.28
PSPC1-202ENST00000427943 OR8I2Q8N0Y5 310 aa13.32□□□□□ -0.28
PSPC1-202ENST00000427943 OR4D5Q8NGN0 318 aa13.32□□□□□ -0.28
PSPC1-202ENST00000427943 SLC25A22Q9H936 323 aa13.32□□□□□ -0.28
PSPC1-202ENST00000427943 PSENENQ9NZ42 101 aa13.32□□□□□ -0.28
PSPC1-202ENST00000427943 ELOA3CA0A087WX78 387 aaPredicted RBP13.31□□□□□ -0.28
PSPC1-202ENST00000427943 SMCO3A2RU48 225 aa13.31□□□□□ -0.28
PSPC1-202ENST00000427943 SCGB1D2O95969 90 aa13.31□□□□□ -0.28
PSPC1-202ENST00000427943 IFNA21P01568 189 aa13.31□□□□□ -0.28
PSPC1-202ENST00000427943 PSMB3P49720 205 aa13.31□□□□□ -0.28
PSPC1-202ENST00000427943 FXYD7P58549 80 aa13.31□□□□□ -0.28
PSPC1-202ENST00000427943 TMEM182Q6ZP80 229 aaPredicted RBP13.31□□□□□ -0.28
PSPC1-202ENST00000427943 C1QTNF4Q9BXJ3 329 aa13.31□□□□□ -0.28
PSPC1-202ENST00000427943 SLC25A32Q9H2D1 315 aa13.31□□□□□ -0.28
PSPC1-202ENST00000427943 CCNKO75909 580 aa13.3□□□□□ -0.28
PSPC1-202ENST00000427943 ORM2P19652 201 aa13.3□□□□□ -0.28
PSPC1-202ENST00000427943 ID1P41134 155 aa13.3□□□□□ -0.28
PSPC1-202ENST00000427943 BPIFCQ8NFQ6 507 aa13.3□□□□□ -0.28
PSPC1-202ENST00000427943 C2CD4CQ8TF44 421 aa13.3□□□□□ -0.28
PSPC1-202ENST00000427943 C7orf50Q9BRJ6 194 aaKnown RBP13.3□□□□□ -0.28
PSPC1-202ENST00000427943 HRH4Q9H3N8 390 aa13.3□□□□□ -0.28
PSPC1-202ENST00000427943 SAV1Q9H4B6 383 aaPredicted RBP13.3□□□□□ -0.28
PSPC1-202ENST00000427943 CELA1Q9UNI1 258 aa13.3□□□□□ -0.28
PSPC1-202ENST00000427943 DEDDO75618 318 aa13.29□□□□□ -0.28
PSPC1-202ENST00000427943 CFDP00746 253 aaPredicted RBP13.29□□□□□ -0.28
PSPC1-202ENST00000427943 HLA-DMBP28068 263 aa13.29□□□□□ -0.28
PSPC1-202ENST00000427943 Q6ZTC4 211 aa13.29□□□□□ -0.28
PSPC1-202ENST00000427943 RPP25LQ8N5L8 163 aaKnown RBP13.29□□□□□ -0.28
PSPC1-202ENST00000427943 OR1B1Q8NGR6 318 aa13.29□□□□□ -0.28
PSPC1-202ENST00000427943 ZNF98A6NK75 572 aa13.28□□□□□ -0.28
PSPC1-202ENST00000427943 F6UB75 175 aa13.28□□□□□ -0.28
PSPC1-202ENST00000427943 RRAS2P62070 204 aaPredicted RBP13.28□□□□□ -0.28
PSPC1-202ENST00000427943 IAH1Q2TAA2 248 aaPredicted RBP13.28□□□□□ -0.28
PSPC1-202ENST00000427943 LGALS9CQ6DKI2 356 aa13.28□□□□□ -0.28
PSPC1-202ENST00000427943 FOXI2Q6ZQN5 318 aa13.28□□□□□ -0.28
PSPC1-202ENST00000427943 TMEM144Q7Z5S9 345 aa13.28□□□□□ -0.28
PSPC1-202ENST00000427943 OR4B1Q8NGF8 309 aa13.28□□□□□ -0.28
PSPC1-202ENST00000427943 TMEM147Q9BVK8 224 aa13.28□□□□□ -0.28
PSPC1-202ENST00000427943 C20orf85Q9H1P6 137 aa13.28□□□□□ -0.28
PSPC1-202ENST00000427943 DOK5Q9P104 306 aa13.28□□□□□ -0.28
PSPC1-202ENST00000427943 PMS2P5A8MQ11 134 aa13.27□□□□□ -0.29
PSPC1-202ENST00000427943 IGLL5B9A064 214 aa13.27□□□□□ -0.29
PSPC1-202ENST00000427943 ISLRO14498 428 aa13.27□□□□□ -0.29
PSPC1-202ENST00000427943 PLA2G10O15496 165 aa13.27□□□□□ -0.29
PSPC1-202ENST00000427943 METTL15P1P0C7V9 234 aa13.27□□□□□ -0.29
PSPC1-202ENST00000427943 GALR1P47211 349 aa13.27□□□□□ -0.29
PSPC1-202ENST00000427943 PAX9P55771 341 aa13.27□□□□□ -0.29
PSPC1-202ENST00000427943 CYP2G1PQ6ZSU1 146 aa13.27□□□□□ -0.29
PSPC1-202ENST00000427943 ZNF767PQ75MW2 155 aa13.27□□□□□ -0.29
PSPC1-202ENST00000427943 ZBTB8BQ8NAP8 495 aaPredicted RBP13.27□□□□□ -0.29
PSPC1-202ENST00000427943 SMIM8Q96KF7 97 aa13.27□□□□□ -0.29
PSPC1-202ENST00000427943 C16orf92Q96LL3 132 aa13.27□□□□□ -0.29
PSPC1-202ENST00000427943 C20orf173Q96LM9 149 aa13.27□□□□□ -0.29
PSPC1-202ENST00000427943 SCRT1Q9BWW7 348 aa13.27□□□□□ -0.29
PSPC1-202ENST00000427943 SLC45A2Q9UMX9 530 aa13.27□□□□□ -0.29
PSPC1-202ENST00000427943 C11orf94C9JXX5 98 aa13.26□□□□□ -0.29
PSPC1-202ENST00000427943 MEOX2P50222 304 aa13.26□□□□□ -0.29
PSPC1-202ENST00000427943 MITD1Q8WV92 249 aa13.26□□□□□ -0.29
PSPC1-202ENST00000427943 C17orf77Q96MU5 243 aa13.26□□□□□ -0.29
PSPC1-202ENST00000427943 RSG1Q9BU20 258 aa13.26□□□□□ -0.29
PSPC1-202ENST00000427943 SLC35B3Q9H1N7 401 aa13.26□□□□□ -0.29
PSPC1-202ENST00000427943 GSKIPQ9P0R6 139 aa13.26□□□□□ -0.29
PSPC1-202ENST00000427943 BIRC6Q9NR09 4857 aa13.26□□□□□ -0.29
PSPC1-202ENST00000427943 KMT2AQ03164 3969 aa13.26□□□□□ -0.29
PSPC1-202ENST00000427943 IGHV3OR16-12A0A075B7B8 117 aa13.25□□□□□ -0.29
PSPC1-202ENST00000427943 H3BRN7 92 aa13.25□□□□□ -0.29
PSPC1-202ENST00000427943 CCSO14618 274 aa13.25□□□□□ -0.29
PSPC1-202ENST00000427943 LYRM1O43325 122 aa13.25□□□□□ -0.29
PSPC1-202ENST00000427943 IL5P05113 134 aa13.25□□□□□ -0.29
PSPC1-202ENST00000427943 EBLN2Q6P2I7 272 aa13.25□□□□□ -0.29
PSPC1-202ENST00000427943 TMEM14EPQ6UXP3 125 aa13.25□□□□□ -0.29
PSPC1-202ENST00000427943 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.25□□□□□ -0.29
PSPC1-202ENST00000427943 ZNF705AQ6ZN79 300 aaPredicted RBP13.25□□□□□ -0.29
PSPC1-202ENST00000427943 ZNF709Q8N972 641 aa13.25□□□□□ -0.29
PSPC1-202ENST00000427943 RCL1Q9Y2P8 373 aaKnown RBP13.25□□□□□ -0.29
PSPC1-202ENST00000427943 TRAV10A0A0B4J240 114 aa13.24□□□□□ -0.29
PSPC1-202ENST00000427943 A0A0J9YX75 114 aa13.24□□□□□ -0.29
PSPC1-202ENST00000427943 LINC00869P0C866 280 aa13.24□□□□□ -0.29
PSPC1-202ENST00000427943 DLK1P80370 383 aa13.24□□□□□ -0.29
PSPC1-202ENST00000427943 FAM78BQ5VT40 261 aa13.24□□□□□ -0.29
PSPC1-202ENST00000427943 RPRMQ9NS64 109 aa13.24□□□□□ -0.29
PSPC1-202ENST00000427943 NDUFA13Q9P0J0 144 aa13.24□□□□□ -0.29
PSPC1-202ENST00000427943 APLNQ9ULZ1 77 aa13.24□□□□□ -0.29
PSPC1-202ENST00000427943 TRAV6A0A075B6T7 132 aa13.23□□□□□ -0.29
PSPC1-202ENST00000427943 ZNF705FA8MVS1 300 aaPredicted RBP13.23□□□□□ -0.29
PSPC1-202ENST00000427943 ZNF705DP0CH99 300 aaPredicted RBP13.23□□□□□ -0.29
PSPC1-202ENST00000427943 ZNF705BP0CI00 300 aaPredicted RBP13.23□□□□□ -0.29
PSPC1-202ENST00000427943 RAP2BP61225 183 aa13.23□□□□□ -0.29
PSPC1-202ENST00000427943 FGL1Q08830 312 aa13.23□□□□□ -0.29
PSPC1-202ENST00000427943 CNPY1Q3B7I2 92 aa13.23□□□□□ -0.29
PSPC1-202ENST00000427943 SAMD13Q5VXD3 122 aa13.23□□□□□ -0.29
PSPC1-202ENST00000427943 SPATA31B1PQ5VZV4 182 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms