RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 C1QTNF4Q9BXJ3 329 aa13.41□□□□□ -0.26
GPC1-205ENST00000427506 WDR12Q9GZL7 423 aaKnown RBP13.41□□□□□ -0.26
GPC1-205ENST00000427506 SLC25A22Q9H936 323 aa13.41□□□□□ -0.26
GPC1-205ENST00000427506 H3BMM0 161 aa13.4□□□□□ -0.26
GPC1-205ENST00000427506 MIFP14174 115 aa13.4□□□□□ -0.26
GPC1-205ENST00000427506 S100A7P31151 101 aa13.4□□□□□ -0.26
GPC1-205ENST00000427506 TMEM144Q7Z5S9 345 aa13.4□□□□□ -0.26
GPC1-205ENST00000427506 ZBTB8BQ8NAP8 495 aaPredicted RBP13.4□□□□□ -0.26
GPC1-205ENST00000427506 OR1B1Q8NGR6 318 aa13.4□□□□□ -0.26
GPC1-205ENST00000427506 LINC00476Q8WZB0 136 aa13.4□□□□□ -0.26
GPC1-205ENST00000427506 TMEM147Q9BVK8 224 aa13.4□□□□□ -0.26
GPC1-205ENST00000427506 TBC1D24Q9ULP9 559 aa13.4□□□□□ -0.26
GPC1-205ENST00000427506 TRAV6A0A075B6T7 132 aa13.39□□□□□ -0.27
GPC1-205ENST00000427506 IGHV4-28A0A0C4DH34 117 aa13.39□□□□□ -0.27
GPC1-205ENST00000427506 IGKV3-20P01619 116 aa13.39□□□□□ -0.27
GPC1-205ENST00000427506 TCRBP04435 133 aa13.39□□□□□ -0.27
GPC1-205ENST00000427506 IL5P05113 134 aa13.39□□□□□ -0.27
GPC1-205ENST00000427506 HLA-DRB4P13762 266 aa13.39□□□□□ -0.27
GPC1-205ENST00000427506 GALR1P47211 349 aa13.39□□□□□ -0.27
GPC1-205ENST00000427506 PSMB3P49720 205 aa13.39□□□□□ -0.27
GPC1-205ENST00000427506 RRAS2P62070 204 aaPredicted RBP13.39□□□□□ -0.27
GPC1-205ENST00000427506 TMEM182Q6ZP80 229 aaPredicted RBP13.39□□□□□ -0.27
GPC1-205ENST00000427506 Q8NAQ8 132 aa13.39□□□□□ -0.27
GPC1-205ENST00000427506 SLC45A2Q9UMX9 530 aa13.39□□□□□ -0.27
GPC1-205ENST00000427506 HLA-DRB4X5D2U9 266 aa13.39□□□□□ -0.27
GPC1-205ENST00000427506 RYR2Q92736 4967 aa13.39□□□□□ -0.27
GPC1-205ENST00000427506 ZNF98A6NK75 572 aa13.38□□□□□ -0.27
GPC1-205ENST00000427506 ZNF705EA8MWA4 302 aaPredicted RBP13.38□□□□□ -0.27
GPC1-205ENST00000427506 METTL15P1P0C7V9 234 aa13.38□□□□□ -0.27
GPC1-205ENST00000427506 PAX9P55771 341 aa13.38□□□□□ -0.27
GPC1-205ENST00000427506 ZNF846Q147U1 533 aa13.38□□□□□ -0.27
GPC1-205ENST00000427506 GSG1LQ6UXU4 331 aa13.38□□□□□ -0.27
GPC1-205ENST00000427506 CYP2G1PQ6ZSU1 146 aa13.38□□□□□ -0.27
GPC1-205ENST00000427506 OR10P1Q8NGE3 313 aa13.38□□□□□ -0.27
GPC1-205ENST00000427506 C16orf92Q96LL3 132 aa13.38□□□□□ -0.27
GPC1-205ENST00000427506 SLC25A32Q9H2D1 315 aa13.38□□□□□ -0.27
GPC1-205ENST00000427506 XCL2Q9UBD3 114 aa13.38□□□□□ -0.27
GPC1-205ENST00000427506 AGRNO00468 2067 aa13.38□□□□□ -0.27
GPC1-205ENST00000427506 PMS2P5A8MQ11 134 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 FAM25EA8MYX2 175 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 ISLRO14498 428 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 CCSO14618 274 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 CCNKO75909 580 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 RBMY1A1P0DJD3 496 aaKnown RBP13.37□□□□□ -0.27
GPC1-205ENST00000427506 RBMY1CP0DJD4 496 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 MEOX2P50222 304 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 DEFB1P60022 68 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 DLK1P80370 383 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 RBMY1FQ15415 496 aaKnown RBP13.37□□□□□ -0.27
GPC1-205ENST00000427506 GDF5OSQ5U4N7 250 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 SAMD13Q5VXD3 122 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 TMEM14EPQ6UXP3 125 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 FOXI2Q6ZQN5 318 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 CSNK1G2-AS1Q8NCQ2 148 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 RSG1Q9BU20 258 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 CCDC32Q9BV29 185 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 SAV1Q9H4B6 383 aaPredicted RBP13.37□□□□□ -0.27
GPC1-205ENST00000427506 NUDT15Q9NV35 164 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 DOK5Q9P104 306 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 MGAT4CQ9UBM8 478 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 X6R8D5 127 aa13.37□□□□□ -0.27
GPC1-205ENST00000427506 SOCS3O14543 225 aa13.36□□□□□ -0.27
GPC1-205ENST00000427506 TSC22D2O75157 780 aa13.36□□□□□ -0.27
GPC1-205ENST00000427506 TAS2R30P59541 319 aa13.36□□□□□ -0.27
GPC1-205ENST00000427506 RAP2BP61225 183 aa13.36□□□□□ -0.27
GPC1-205ENST00000427506 EBLN2Q6P2I7 272 aa13.36□□□□□ -0.27
GPC1-205ENST00000427506 OR4B1Q8NGF8 309 aa13.36□□□□□ -0.27
GPC1-205ENST00000427506 GPR82Q96P67 336 aa13.36□□□□□ -0.27
GPC1-205ENST00000427506 NPVFQ9HCQ7 196 aa13.36□□□□□ -0.27
GPC1-205ENST00000427506 C5orf51A6NDU8 294 aa13.35□□□□□ -0.27
GPC1-205ENST00000427506 L7N2F9 121 aa13.35□□□□□ -0.27
GPC1-205ENST00000427506 MBPP02686 304 aaPredicted RBP13.35□□□□□ -0.27
GPC1-205ENST00000427506 FXYD7P58549 80 aa13.35□□□□□ -0.27
GPC1-205ENST00000427506 SELENOTP62341 195 aa13.35□□□□□ -0.27
GPC1-205ENST00000427506 VAMP2P63027 116 aa13.35□□□□□ -0.27
GPC1-205ENST00000427506 ZNF431Q8TF32 576 aaPredicted RBP13.35□□□□□ -0.27
GPC1-205ENST00000427506 SEC22CQ9BRL7 303 aa13.35□□□□□ -0.27
GPC1-205ENST00000427506 RPRMQ9NS64 109 aa13.35□□□□□ -0.27
GPC1-205ENST00000427506 HIGD1AQ9Y241 93 aa13.35□□□□□ -0.27
GPC1-205ENST00000427506 RCL1Q9Y2P8 373 aaKnown RBP13.35□□□□□ -0.27
GPC1-205ENST00000427506 SACSQ9NZJ4 4579 aa13.34□□□□□ -0.27
GPC1-205ENST00000427506 HYPMO75409 117 aa13.34□□□□□ -0.27
GPC1-205ENST00000427506 H2AFB2P0C5Z0 115 aa13.34□□□□□ -0.27
GPC1-205ENST00000427506 OR5G3P0C626 314 aa13.34□□□□□ -0.27
GPC1-205ENST00000427506 LINC00869P0C866 280 aa13.34□□□□□ -0.27
GPC1-205ENST00000427506 SPATA31B1PQ5VZV4 182 aa13.34□□□□□ -0.27
GPC1-205ENST00000427506 C2CD4CQ8TF44 421 aa13.34□□□□□ -0.27
GPC1-205ENST00000427506 SCRT1Q9BWW7 348 aa13.34□□□□□ -0.27
GPC1-205ENST00000427506 SLC25A39Q9BZJ4 359 aaPredicted RBP13.34□□□□□ -0.27
GPC1-205ENST00000427506 HRH4Q9H3N8 390 aa13.34□□□□□ -0.27
GPC1-205ENST00000427506 LSM5Q9Y4Y9 91 aaKnown RBP13.34□□□□□ -0.27
GPC1-205ENST00000427506 FAM240BA0A1B0GVZ2 78 aa13.33□□□□□ -0.28
GPC1-205ENST00000427506 C7orf66A4D0T2 115 aa13.33□□□□□ -0.28
GPC1-205ENST00000427506 FNDC10F2Z333 226 aa13.33□□□□□ -0.28
GPC1-205ENST00000427506 F6UB75 175 aa13.33□□□□□ -0.28
GPC1-205ENST00000427506 BCAP31P51572 246 aa13.33□□□□□ -0.28
GPC1-205ENST00000427506 FGL1Q08830 312 aa13.33□□□□□ -0.28
GPC1-205ENST00000427506 MZT2BQ6NZ67 158 aa13.33□□□□□ -0.28
GPC1-205ENST00000427506 TEPPQ6URK8 271 aa13.33□□□□□ -0.28
GPC1-205ENST00000427506 S100A7AQ86SG5 101 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms