RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 MS4A10Q96PG2 267 aa20.67■□□□□ 0.9
LDB1-202ENST00000425280 CHRDL1Q9BU40 450 aa20.67■□□□□ 0.9
LDB1-202ENST00000425280 AURKAIP1Q9NWT8 199 aaPredicted RBP20.67■□□□□ 0.9
LDB1-202ENST00000425280 PRELID1Q9Y255 219 aa20.67■□□□□ 0.9
LDB1-202ENST00000425280 H3BRN7 92 aa20.66■□□□□ 0.9
LDB1-202ENST00000425280 CLDN34H7C241 214 aa20.66■□□□□ 0.9
LDB1-202ENST00000425280 IGHG2P01859 326 aa20.66■□□□□ 0.9
LDB1-202ENST00000425280 CRYBA1P05813 215 aa20.66■□□□□ 0.9
LDB1-202ENST00000425280 BLNKQ8WV28 456 aa20.66■□□□□ 0.9
LDB1-202ENST00000425280 IGF1P05019 195 aa20.66■□□□□ 0.9
LDB1-202ENST00000425280 NBEAP1P0C6P0 100 aa20.66■□□□□ 0.9
LDB1-202ENST00000425280 USF2Q15853 346 aaPredicted RBP20.66■□□□□ 0.9
LDB1-202ENST00000425280 ZNF329Q86UD4 541 aa20.66■□□□□ 0.9
LDB1-202ENST00000425280 C2CD4CQ8TF44 421 aa20.66■□□□□ 0.9
LDB1-202ENST00000425280 TMEM14CQ9P0S9 112 aa20.66■□□□□ 0.9
LDB1-202ENST00000425280 URGCP-MRPS24S4R325 110 aa20.66■□□□□ 0.9
LDB1-202ENST00000425280 SCGB2A1O75556 95 aa20.65■□□□□ 0.9
LDB1-202ENST00000425280 ADMP35318 185 aa20.65■□□□□ 0.9
LDB1-202ENST00000425280 BLCAPP62952 87 aa20.65■□□□□ 0.9
LDB1-202ENST00000425280 ELOBQ15370 118 aa20.65■□□□□ 0.9
LDB1-202ENST00000425280 PRRC2AP48634 2157 aaKnown RBP20.65■□□□□ 0.9
LDB1-202ENST00000425280 IGHV4-59P01825 116 aa20.65■□□□□ 0.9
LDB1-202ENST00000425280 ZNF600Q6ZNG1 722 aa20.65■□□□□ 0.9
LDB1-202ENST00000425280 ZANQ9Y493 2812 aa20.64■□□□□ 0.9
LDB1-202ENST00000425280 MYCNOSP40205 109 aa20.64■□□□□ 0.89
LDB1-202ENST00000425280 HELTA6NFD8 242 aa20.63■□□□□ 0.89
LDB1-202ENST00000425280 C9JCJ5 164 aa20.63■□□□□ 0.89
LDB1-202ENST00000425280 FOLR2P14207 255 aa20.63■□□□□ 0.89
LDB1-202ENST00000425280 RAB5AP20339 215 aa20.63■□□□□ 0.89
LDB1-202ENST00000425280 GPR183P32249 361 aa20.63■□□□□ 0.89
LDB1-202ENST00000425280 RANP62826 216 aaKnown RBP20.63■□□□□ 0.89
LDB1-202ENST00000425280 CYB5R2Q6BCY4 276 aa20.63■□□□□ 0.89
LDB1-202ENST00000425280 OCC1Q8TAD7 63 aa20.63■□□□□ 0.89
LDB1-202ENST00000425280 LOC105371267A0A1B0GV96 52 aa20.63■□□□□ 0.89
LDB1-202ENST00000425280 Q6ZS46 218 aa20.63■□□□□ 0.89
LDB1-202ENST00000425280 CCDC140Q96MF4 163 aa20.63■□□□□ 0.89
LDB1-202ENST00000425280 HELZ2Q9BYK8 2649 aaKnown RBP20.63■□□□□ 0.89
LDB1-202ENST00000425280 CLEC3BP05452 202 aa20.62■□□□□ 0.89
LDB1-202ENST00000425280 IER3P46695 156 aa20.62■□□□□ 0.89
LDB1-202ENST00000425280 C9orf139Q6ZV77 190 aa20.62■□□□□ 0.89
LDB1-202ENST00000425280 WFDC11Q8NEX6 87 aa20.62■□□□□ 0.89
LDB1-202ENST00000425280 EEF1AKMT3Q96AZ1 226 aa20.62■□□□□ 0.89
LDB1-202ENST00000425280 ANAPC16Q96DE5 110 aa20.62■□□□□ 0.89
LDB1-202ENST00000425280 ZNF414Q96IQ9 312 aa20.62■□□□□ 0.89
LDB1-202ENST00000425280 H3BTX0 84 aa20.61■□□□□ 0.89
LDB1-202ENST00000425280 CXCL1P09341 107 aa20.61■□□□□ 0.89
LDB1-202ENST00000425280 HNF1AP20823 631 aa20.61■□□□□ 0.89
LDB1-202ENST00000425280 NOL4LQ96MY1 436 aaPredicted RBP20.61■□□□□ 0.89
LDB1-202ENST00000425280 H7BYZ3 331 aa20.6■□□□□ 0.89
LDB1-202ENST00000425280 HIST1H1EP10412 219 aaKnown RBP20.6■□□□□ 0.89
LDB1-202ENST00000425280 ZNF586Q9NXT0 402 aa20.6■□□□□ 0.89
LDB1-202ENST00000425280 LY96Q9Y6Y9 160 aa20.6■□□□□ 0.89
LDB1-202ENST00000425280 ZNF98A6NK75 572 aa20.6■□□□□ 0.89
LDB1-202ENST00000425280 ATP5G2Q06055 141 aa20.6■□□□□ 0.89
LDB1-202ENST00000425280 CENPWQ5EE01 88 aa20.6■□□□□ 0.89
LDB1-202ENST00000425280 CLEC19AQ6UXS0 136 aa20.6■□□□□ 0.89
LDB1-202ENST00000425280 MLXQ9UH92 298 aa20.6■□□□□ 0.89
LDB1-202ENST00000425280 TRBV7-1A0A0A6YYK4 115 aa20.59■□□□□ 0.89
LDB1-202ENST00000425280 TGIF2-C20orf24A0A0A6YYL0 155 aa20.59■□□□□ 0.89
LDB1-202ENST00000425280 PPIFP30405 207 aaKnown RBP20.59■□□□□ 0.89
LDB1-202ENST00000425280 S100A7AQ86SG5 101 aa20.59■□□□□ 0.89
LDB1-202ENST00000425280 BPIFA4PQ86YQ2 179 aa20.59■□□□□ 0.89
LDB1-202ENST00000425280 GAR1Q9NY12 217 aaKnown RBP20.59■□□□□ 0.89
LDB1-202ENST00000425280 PGPA6NDG6 321 aa20.58■□□□□ 0.89
LDB1-202ENST00000425280 FAM223BA6NKX1 122 aa20.58■□□□□ 0.89
LDB1-202ENST00000425280 K7EN84 100 aa20.58■□□□□ 0.89
LDB1-202ENST00000425280 GNG4P50150 75 aa20.58■□□□□ 0.89
LDB1-202ENST00000425280 FAM223AQ8IWN6 122 aa20.58■□□□□ 0.89
LDB1-202ENST00000425280 TCEAL7Q9BRU2 100 aa20.58■□□□□ 0.89
LDB1-202ENST00000425280 PEX7O00628 323 aa20.58■□□□□ 0.88
LDB1-202ENST00000425280 CD99P14209 185 aa20.58■□□□□ 0.88
LDB1-202ENST00000425280 CIARTQ8N365 385 aaPredicted RBP20.58■□□□□ 0.88
LDB1-202ENST00000425280 CREBBPQ92793 2442 aa20.58■□□□□ 0.88
LDB1-202ENST00000425280 IGHV3-35A0A0C4DH35 117 aa20.57■□□□□ 0.88
LDB1-202ENST00000425280 MRPS12O15235 138 aaKnown RBP20.57■□□□□ 0.88
LDB1-202ENST00000425280 TRGV3P03979 118 aa20.57■□□□□ 0.88
LDB1-202ENST00000425280 Q9H3A6 140 aa20.57■□□□□ 0.88
LDB1-202ENST00000425280 AP4M1O00189 453 aa20.57■□□□□ 0.88
LDB1-202ENST00000425280 SLC25A5P05141 298 aaKnown RBP20.57■□□□□ 0.88
LDB1-202ENST00000425280 GNG5P63218 68 aa20.57■□□□□ 0.88
LDB1-202ENST00000425280 OR5R1Q8NH85 324 aa20.57■□□□□ 0.88
LDB1-202ENST00000425280 SFRP2Q96HF1 295 aa20.57■□□□□ 0.88
LDB1-202ENST00000425280 IGF2BP2-AS1Q96M15 143 aa20.57■□□□□ 0.88
LDB1-202ENST00000425280 LINC00479Q96M42 142 aa20.57■□□□□ 0.88
LDB1-202ENST00000425280 EPDR1Q9UM22 224 aa20.57■□□□□ 0.88
LDB1-202ENST00000425280 IGLC2P0DOY2 106 aa20.56■□□□□ 0.88
LDB1-202ENST00000425280 TGOLN2O43493 480 aa20.55■□□□□ 0.88
LDB1-202ENST00000425280 BRI3O95415 125 aa20.55■□□□□ 0.88
LDB1-202ENST00000425280 PFN1P07737 140 aaKnown RBP20.55■□□□□ 0.88
LDB1-202ENST00000425280 GALR1P47211 349 aa20.55■□□□□ 0.88
LDB1-202ENST00000425280 TOMM20LQ6UXN7 152 aa20.55■□□□□ 0.88
LDB1-202ENST00000425280 OR4F17Q8NGA8 305 aa20.55■□□□□ 0.88
LDB1-202ENST00000425280 GNB4Q9HAV0 340 aa20.55■□□□□ 0.88
LDB1-202ENST00000425280 H3BUA1 57 aa20.55■□□□□ 0.88
LDB1-202ENST00000425280 CNN1P51911 297 aaKnown RBP20.55■□□□□ 0.88
LDB1-202ENST00000425280 TEX38Q6PEX7 206 aa20.55■□□□□ 0.88
LDB1-202ENST00000425280 Q6YL49 198 aa20.55■□□□□ 0.88
LDB1-202ENST00000425280 ZFAND3Q9H8U3 227 aa20.55■□□□□ 0.88
LDB1-202ENST00000425280 RABAC1Q9UI14 185 aa20.55■□□□□ 0.88
LDB1-202ENST00000425280 CDC42EP3Q9UKI2 254 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms