RNA–Protein interactions for RNA: ENST00000423463.6

VPS13A-208, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 2

Gene VPS13A, Length 2,702 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-208ENST00000423463 TRBV7-1A0A0A6YYK4 115 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 G3V4G9 280 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 H7C423 109 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 PLA2G10O15496 165 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 PLXNB1O43157 2135 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 SFT2D2O95562 160 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 IFNA17P01571 189 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 PRH1P02810 166 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 SNCAP37840 140 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 CCR6P51684 374 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 SUB1P53999 127 aaKnown RBP eCLIP1.87□□□□□ -2.11
VPS13A-208ENST00000423463 RAB25P57735 213 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 SUPT4H1P63272 117 aaKnown RBP1.87□□□□□ -2.11
VPS13A-208ENST00000423463 PRCDQ00LT1 54 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 DEFA6Q01524 100 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 WT1-ASQ06250 92 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 EGFEM1PQ0D2K5 195 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 EXOSC2Q13868 293 aaKnown RBP1.87□□□□□ -2.11
VPS13A-208ENST00000423463 ZNF846Q147U1 533 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 C15orf32Q32M92 178 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 TMED4Q7Z7H5 227 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 CENPSQ8N2Z9 138 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 OR10W1Q8NGF6 305 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 OR1P1Q8NH06 330 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 LHFPL5Q8TAF8 219 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 RNASE8Q8TDE3 154 aaKnown RBP1.87□□□□□ -2.11
VPS13A-208ENST00000423463 EEF1AKMT3Q96AZ1 226 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 C2orf48Q96LS8 159 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 LINC00479Q96M42 142 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 FAM218AQ96MZ4 157 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 OR4C12Q96R67 309 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 PLEKHA3Q9HB20 300 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 ENY2Q9NPA8 101 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 F11RQ9Y624 299 aaKnown RBP1.87□□□□□ -2.11
VPS13A-208ENST00000423463 WNK1Q9H4A3 2382 aa1.87□□□□□ -2.11
VPS13A-208ENST00000423463 TNCP24821 2201 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 IGLV7-46A0A075B6I9 117 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 A0A0G2JRQ6 117 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 LINC00854A0A1B0GVQ3 168 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 C5orf51A6NDU8 294 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 SEC14L6B5MCN3 397 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 CORTO00230 105 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 LYRM1O43325 122 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 GGCTO75223 188 aaKnown RBP1.86□□□□□ -2.11
VPS13A-208ENST00000423463 REG1AP05451 166 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 SULT1A3P0DMM9 295 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 SULT1A4P0DMN0 295 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 SLC25A6P12236 298 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 FCGR2BP31994 310 aaPredicted RBP1.86□□□□□ -2.11
VPS13A-208ENST00000423463 XGP55808 180 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 ATP5IP56385 69 aaPredicted RBP1.86□□□□□ -2.11
VPS13A-208ENST00000423463 SMCO1Q147U7 214 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 RPEL1Q2QD12 228 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 FAM106AQ4KMX7 169 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 LCE3CQ5T5A8 94 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 PVRIGQ6DKI7 326 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 CD164L2Q6UWJ8 174 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 CLEC19AQ6UXS0 136 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 GPHB5Q86YW7 130 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 SLC35G3Q8N808 338 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 ZNF502Q8TBZ5 544 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 TXN2Q99757 166 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 SIGLEC8Q9NYZ4 499 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 C9orf170A2RU37 121 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 CEBPZOSA8MTT3 80 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 LGALS9O00182 355 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 MED6O75586 246 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 TRBV12-3P01733 135 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 HLA-AP01891 365 aaKnown RBP1.86□□□□□ -2.11
VPS13A-208ENST00000423463 TCRBP04435 133 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 OR4E1P0C645 316 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 RNASE2P10153 161 aaKnown RBP1.86□□□□□ -2.11
VPS13A-208ENST00000423463 BTCP35070 178 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 HTR2BP41595 481 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 MFAP2P55001 183 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 ASAH1Q13510 395 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 PPP1R1AQ13522 171 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 C2orf83Q53S99 150 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 NMSQ5H8A3 153 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 PLET1Q6UQ28 207 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 C19orf35Q6ZS72 473 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 LYZL2Q7Z4W2 148 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 LYG2Q86SG7 212 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 OR9G4Q8NGQ1 327 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 COQ8AQ8NI60 647 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 OVOL2Q9BRP0 275 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 FNDC4Q9H6D8 234 aaPredicted RBP1.86□□□□□ -2.11
VPS13A-208ENST00000423463 PALMDQ9NP74 551 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 C21orf62Q9NYP8 219 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 U3KQ87 197 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 TENM1Q9UKZ4 2725 aa1.86□□□□□ -2.11
VPS13A-208ENST00000423463 TRAV30A0A087WSZ9 112 aa1.85□□□□□ -2.11
VPS13A-208ENST00000423463 FAM240BA0A1B0GVZ2 78 aa1.85□□□□□ -2.11
VPS13A-208ENST00000423463 MFSD2BA6NFX1 497 aa1.85□□□□□ -2.11
VPS13A-208ENST00000423463 I3L2K1 104 aa1.85□□□□□ -2.11
VPS13A-208ENST00000423463 K7EIM0 57 aa1.85□□□□□ -2.11
VPS13A-208ENST00000423463 K7EMT4 169 aa1.85□□□□□ -2.11
VPS13A-208ENST00000423463 TGOLN2O43493 480 aa1.85□□□□□ -2.11
VPS13A-208ENST00000423463 PITX3O75364 302 aa1.85□□□□□ -2.11
VPS13A-208ENST00000423463 UPK1BO75841 260 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms