RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 ATP6V0CP27449 155 aa7.24□□□□□ -1.25
CHRNA1-206ENST00000416004 RAB11AP62491 216 aa7.24□□□□□ -1.25
CHRNA1-206ENST00000416004 ERHP84090 104 aaKnown RBP7.24□□□□□ -1.25
CHRNA1-206ENST00000416004 ZNF266Q14584 549 aa7.24□□□□□ -1.25
CHRNA1-206ENST00000416004 MLANAQ16655 118 aa7.24□□□□□ -1.25
CHRNA1-206ENST00000416004 TMEM241Q24JQ0 296 aa7.24□□□□□ -1.25
CHRNA1-206ENST00000416004 VWC2Q2TAL6 325 aa7.24□□□□□ -1.25
CHRNA1-206ENST00000416004 ZNF562Q6V9R5 426 aa7.24□□□□□ -1.25
CHRNA1-206ENST00000416004 PINX1Q96BK5 328 aaKnown RBP7.24□□□□□ -1.25
CHRNA1-206ENST00000416004 RSG1Q9BU20 258 aa7.24□□□□□ -1.25
CHRNA1-206ENST00000416004 TMEM147Q9BVK8 224 aa7.24□□□□□ -1.25
CHRNA1-206ENST00000416004 ZNF702PQ9H963 129 aa7.24□□□□□ -1.25
CHRNA1-206ENST00000416004 MOB4Q9Y3A3 225 aa7.24□□□□□ -1.25
CHRNA1-206ENST00000416004 LINC01548A6NM66 108 aa7.23□□□□□ -1.25
CHRNA1-206ENST00000416004 ZNF727A8MUV8 499 aa7.23□□□□□ -1.25
CHRNA1-206ENST00000416004 HLA-DRB1P01911 266 aa7.23□□□□□ -1.25
CHRNA1-206ENST00000416004 CDKN1BP46527 198 aa7.23□□□□□ -1.25
CHRNA1-206ENST00000416004 RANP62826 216 aaKnown RBP7.23□□□□□ -1.25
CHRNA1-206ENST00000416004 ZNF343Q6P1L6 599 aa7.23□□□□□ -1.25
CHRNA1-206ENST00000416004 DPPA3Q6W0C5 159 aa7.23□□□□□ -1.25
CHRNA1-206ENST00000416004 Q8N2B8 174 aa7.23□□□□□ -1.25
CHRNA1-206ENST00000416004 OR4F17Q8NGA8 305 aa7.23□□□□□ -1.25
CHRNA1-206ENST00000416004 OR4X2Q8NGF9 303 aa7.23□□□□□ -1.25
CHRNA1-206ENST00000416004 FAM110DQ8TAY7 271 aaPredicted RBP7.23□□□□□ -1.25
CHRNA1-206ENST00000416004 ARPC1AQ92747 370 aa7.23□□□□□ -1.25
CHRNA1-206ENST00000416004 OR4F4Q96R69 305 aa7.23□□□□□ -1.25
CHRNA1-206ENST00000416004 RASL11BQ9BPW5 248 aa7.23□□□□□ -1.25
CHRNA1-206ENST00000416004 WDR61Q9GZS3 305 aaKnown RBP7.23□□□□□ -1.25
CHRNA1-206ENST00000416004 ZNF705GA8MUZ8 300 aaPredicted RBP7.22□□□□□ -1.25
CHRNA1-206ENST00000416004 IFNA5P01569 189 aa7.22□□□□□ -1.25
CHRNA1-206ENST00000416004 IGHV3-48P01763 117 aa7.22□□□□□ -1.25
CHRNA1-206ENST00000416004 HBE1P02100 147 aa7.22□□□□□ -1.25
CHRNA1-206ENST00000416004 ATP6V1FQ16864 119 aa7.22□□□□□ -1.25
CHRNA1-206ENST00000416004 PVRIGQ6DKI7 326 aa7.22□□□□□ -1.25
CHRNA1-206ENST00000416004 C11orf44Q8N8P7 122 aa7.22□□□□□ -1.25
CHRNA1-206ENST00000416004 ZNF114Q8NC26 417 aa7.22□□□□□ -1.25
CHRNA1-206ENST00000416004 FNDC4Q9H6D8 234 aaPredicted RBP7.22□□□□□ -1.25
CHRNA1-206ENST00000416004 ZFP30Q9Y2G7 519 aa7.22□□□□□ -1.25
CHRNA1-206ENST00000416004 SCAF4O95104 1147 aaKnown RBP7.21□□□□□ -1.25
CHRNA1-206ENST00000416004 OR10J1P30954 320 aa7.21□□□□□ -1.25
CHRNA1-206ENST00000416004 RBX1P62877 108 aa7.21□□□□□ -1.25
CHRNA1-206ENST00000416004 SLC35B1P78383 322 aa7.21□□□□□ -1.25
CHRNA1-206ENST00000416004 NSUN5P1Q3KNT7 163 aa7.21□□□□□ -1.25
CHRNA1-206ENST00000416004 NDUFA11Q86Y39 141 aa7.21□□□□□ -1.25
CHRNA1-206ENST00000416004 C20orf144Q9BQM9 153 aa7.21□□□□□ -1.25
CHRNA1-206ENST00000416004 SRSF8Q9BRL6 282 aaKnown RBP7.21□□□□□ -1.25
CHRNA1-206ENST00000416004 PYGO2Q9BRQ0 406 aa7.21□□□□□ -1.25
CHRNA1-206ENST00000416004 MRPL36Q9P0J6 103 aaKnown RBP7.21□□□□□ -1.25
CHRNA1-206ENST00000416004 CHTOPQ9Y3Y2 248 aaKnown RBP7.21□□□□□ -1.25
CHRNA1-206ENST00000416004 F11RQ9Y624 299 aaKnown RBP7.21□□□□□ -1.25
CHRNA1-206ENST00000416004 K7EP13 123 aa7.21□□□□□ -1.26
CHRNA1-206ENST00000416004 ATP6V0E1O15342 81 aa7.21□□□□□ -1.26
CHRNA1-206ENST00000416004 FHITP49789 147 aa7.21□□□□□ -1.26
CHRNA1-206ENST00000416004 ATP5IP56385 69 aaPredicted RBP7.21□□□□□ -1.26
CHRNA1-206ENST00000416004 KRTAP10-3P60369 221 aa7.21□□□□□ -1.26
CHRNA1-206ENST00000416004 BLCAPP62952 87 aa7.21□□□□□ -1.26
CHRNA1-206ENST00000416004 ACOT6Q3I5F7 207 aaPredicted RBP7.21□□□□□ -1.26
CHRNA1-206ENST00000416004 KHDC1LQ5JSQ8 128 aa7.21□□□□□ -1.26
CHRNA1-206ENST00000416004 COL5A1-AS1Q5SY13 56 aa7.21□□□□□ -1.26
CHRNA1-206ENST00000416004 SLC25A24Q6NUK1 477 aa7.21□□□□□ -1.26
CHRNA1-206ENST00000416004 Q6ZS46 218 aa7.21□□□□□ -1.26
CHRNA1-206ENST00000416004 OR5AU1Q8NGC0 362 aa7.21□□□□□ -1.26
CHRNA1-206ENST00000416004 OR4X1Q8NH49 305 aa7.21□□□□□ -1.26
CHRNA1-206ENST00000416004 FAM213BQ8TBF2 198 aa7.21□□□□□ -1.26
CHRNA1-206ENST00000416004 SCGB1C1Q8TD33 95 aa7.21□□□□□ -1.26
CHRNA1-206ENST00000416004 PARD6GQ9BYG4 376 aaPredicted RBP7.21□□□□□ -1.26
CHRNA1-206ENST00000416004 SERTAD4Q9NUC0 356 aa7.21□□□□□ -1.26
CHRNA1-206ENST00000416004 WDR83OSQ9Y284 106 aa7.21□□□□□ -1.26
CHRNA1-206ENST00000416004 URGCP-MRPS24S4R325 110 aa7.21□□□□□ -1.26
CHRNA1-206ENST00000416004 IGKV1OR2-108A0A075B7D4 117 aa7.2□□□□□ -1.26
CHRNA1-206ENST00000416004 IGHV3-21A0A0B4J1V1 117 aa7.2□□□□□ -1.26
CHRNA1-206ENST00000416004 PF4V1P10720 104 aa7.2□□□□□ -1.26
CHRNA1-206ENST00000416004 CD69Q07108 199 aa7.2□□□□□ -1.26
CHRNA1-206ENST00000416004 DMRTA1Q5VZB9 504 aa7.2□□□□□ -1.26
CHRNA1-206ENST00000416004 TMEM182Q6ZP80 229 aaPredicted RBP7.2□□□□□ -1.26
CHRNA1-206ENST00000416004 MRPL41Q8IXM3 137 aaKnown RBP7.2□□□□□ -1.26
CHRNA1-206ENST00000416004 OR2G3Q8NGZ4 309 aa7.2□□□□□ -1.26
CHRNA1-206ENST00000416004 MGST2Q99735 147 aa7.2□□□□□ -1.26
CHRNA1-206ENST00000416004 WNT10AQ9GZT5 417 aa7.2□□□□□ -1.26
CHRNA1-206ENST00000416004 LSM4Q9Y4Z0 139 aaKnown RBP7.2□□□□□ -1.26
CHRNA1-206ENST00000416004 TRAV1-1A0A0B4J248 108 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 TCRBV4S1A1TA0A5B7 111 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 XKRY2A2RUG3 117 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 G3V318 75 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 CRYGCP07315 174 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 OPRK1P41145 380 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 SUB1P53999 127 aaKnown RBP eCLIP7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 FAM3BP58499 235 aaPredicted RBP7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 ICAM4Q14773 271 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 TEX38Q6PEX7 206 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 SPSB3Q6PJ21 355 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 OR5T1Q8NG75 326 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 GNPNAT1Q96EK6 184 aaPredicted RBP7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 FANCD2OSQ96PS1 177 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 IMMP2LQ96T52 175 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 RARRES2Q99969 163 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 MIEN1Q9BRT3 115 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 NPCDR1Q9BY65 106 aa7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 TSSC4Q9Y5U2 329 aaPredicted RBP7.19□□□□□ -1.26
CHRNA1-206ENST00000416004 NBEAL1Q6ZS30 2694 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms