RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 MLXQ9UH92 298 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 KLK9Q9UKQ9 250 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 STRAPQ9Y3F4 350 aaKnown RBP3.67□□□□□ -1.82
VPS41-205ENST00000414632 TENM3Q9P273 2699 aa3.67□□□□□ -1.82
VPS41-205ENST00000414632 A0A0B4J2A0 478 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 IGHV3-66A0A0C4DH42 116 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 C9orf170A2RU37 121 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 CENPXA8MT69 81 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 MPTX1A8MV57 137 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 GNG7O60262 68 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 YIF1AO95070 293 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 CTSGP08311 255 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 OR4E1P0C645 316 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 OPRK1P41145 380 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 SRPXP78539 464 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 TNFRSF9Q07011 255 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 DHRS2Q13268 280 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 SMCO1Q147U7 214 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 FAM106AQ4KMX7 169 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 NMSQ5H8A3 153 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 GPHB5Q86YW7 130 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 SLC24A4Q8NFF2 622 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 OR1L6Q8NGR2 347 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 VN1R17PQ8TDU5 208 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 DTD1Q8TEA8 209 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 TMEM190Q8WZ59 177 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 IL22RA2Q969J5 263 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 C17orf77Q96MU5 243 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 SEC22CQ9BRL7 303 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 WFDC10AQ9H1F0 79 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 FNDC4Q9H6D8 234 aaPredicted RBP3.66□□□□□ -1.82
VPS41-205ENST00000414632 SHPKQ9UHJ6 478 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 TBC1D24Q9ULP9 559 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 PAIP2BQ9ULR5 123 aaKnown RBP3.66□□□□□ -1.82
VPS41-205ENST00000414632 NBEAL2Q6ZNJ1 2754 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 DNAH7Q8WXX0 4024 aa3.66□□□□□ -1.82
VPS41-205ENST00000414632 IGKV3-7A0A075B6H7 116 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 A0A087X0K7 114 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 A8MWP6 167 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 H3BP45 60 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 LGALS9O00182 355 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 WRBO00258 174 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 CCSO14618 274 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 NUPL2O15504 423 aaKnown RBP3.65□□□□□ -1.83
VPS41-205ENST00000414632 IFNA10P01566 189 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 APOHP02749 345 aaPredicted RBP3.65□□□□□ -1.83
VPS41-205ENST00000414632 CBLN1P23435 193 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 NPY1RP25929 384 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 HTR2BP41595 481 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 RND2P52198 227 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 SUB1P53999 127 aaKnown RBP eCLIP3.65□□□□□ -1.83
VPS41-205ENST00000414632 IFITM3Q01628 133 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 ZNF846Q147U1 533 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 DEFB114Q30KQ6 69 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 BSXQ3C1V8 233 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 TIGITQ495A1 244 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 LCN12Q6JVE5 192 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 LYG2Q86SG7 212 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 TMEM61Q8N0U2 210 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 DUSP18Q8NEJ0 188 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 OR52E5Q8NH55 327 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 DEDD2Q8WXF8 326 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 S100ZQ8WXG8 99 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 ACY3Q96HD9 319 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 C7orf50Q9BRJ6 194 aaKnown RBP3.65□□□□□ -1.83
VPS41-205ENST00000414632 CCDC32Q9BV29 185 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 ZNF436Q9C0F3 470 aaPredicted RBP3.65□□□□□ -1.83
VPS41-205ENST00000414632 HIPK2Q9H2X6 1198 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 NUDT15Q9NV35 164 aa3.65□□□□□ -1.83
VPS41-205ENST00000414632 ZMAT5Q9UDW3 170 aaKnown RBP3.65□□□□□ -1.83
VPS41-205ENST00000414632 A0A1B0GU03 582 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 FAM240BA0A1B0GVZ2 78 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 DUXBA0A1W2PPF3 345 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 FAM25EA8MYX2 175 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 INS-IGF2F8WCM5 200 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 CORTO00230 105 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 NDUFA4O00483 81 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 SSSCA1O60232 199 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 PITX3O75364 302 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 UPK1BO75841 260 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 TMEM50AO95807 157 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 TCRBP04435 133 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 IFNA4P05014 189 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 CD7P09564 240 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 FRMD6-AS1P0C7T7 363 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 TFPI2P48307 235 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 POLR2GP62487 172 aaKnown RBP eCLIP3.64□□□□□ -1.83
VPS41-205ENST00000414632 C2orf83Q53S99 150 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 PVRIGQ6DKI7 326 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 PRSS54Q6PEW0 395 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 SPSB3Q6PJ21 355 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 TOMM20LQ6UXN7 152 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 GSG1LQ6UXU4 331 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 SIGLEC15Q6ZMC9 328 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 SLC16A13Q7RTY0 426 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 GTSCR1Q86UQ5 136 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 SBSPONQ8IVN8 264 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 DEFB125Q8N687 156 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 MAPKAPK5-AS1Q8N8E1 139 aa3.64□□□□□ -1.83
VPS41-205ENST00000414632 LRTM2Q8N967 370 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms