RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 IL36BQ9NZH7 164 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 OR2W1Q9Y3N9 320 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 ZNF462Q96JM2 2506 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 TRGV8A0A0C4DH27 118 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 CGAP01215 116 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 MT-ND6P03923 174 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 PSG2P11465 335 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 CRYGSP22914 178 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 NPPCP23582 126 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 GNB1P62873 340 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 PMCHL1Q16048 86 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 TCF23Q7RTU1 214 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 Q8N976 141 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 RASL10AQ92737 203 aa7.58□□□□□ -1.2
SNHG3-201ENST00000413987 CRYBG3Q68DQ2 2970 aa7.57□□□□□ -1.2
SNHG3-201ENST00000413987 HRNRQ86YZ3 2850 aaPredicted RBP7.57□□□□□ -1.2
SNHG3-201ENST00000413987 IGHV1-69-2A0A0G2JMI3 117 aa7.57□□□□□ -1.2
SNHG3-201ENST00000413987 FCN1O00602 326 aa7.57□□□□□ -1.2
SNHG3-201ENST00000413987 HSPB6O14558 160 aa7.57□□□□□ -1.2
SNHG3-201ENST00000413987 HMGB3O15347 200 aaKnown RBP7.57□□□□□ -1.2
SNHG3-201ENST00000413987 CRYGDP07320 174 aa7.57□□□□□ -1.2
SNHG3-201ENST00000413987 C1orf195Q5TG92 126 aa7.57□□□□□ -1.2
SNHG3-201ENST00000413987 Q6ZRM9 215 aa7.57□□□□□ -1.2
SNHG3-201ENST00000413987 MDP1Q86V88 176 aa7.57□□□□□ -1.2
SNHG3-201ENST00000413987 SAXO1Q8IYX7 474 aa7.57□□□□□ -1.2
SNHG3-201ENST00000413987 GALMQ96C23 342 aa7.57□□□□□ -1.2
SNHG3-201ENST00000413987 GNB1LQ9BYB4 327 aa7.57□□□□□ -1.2
SNHG3-201ENST00000413987 NRN1Q9NPD7 142 aa7.57□□□□□ -1.2
SNHG3-201ENST00000413987 THYN1Q9P016 225 aa7.57□□□□□ -1.2
SNHG3-201ENST00000413987 PROCRQ9UNN8 238 aa7.57□□□□□ -1.2
SNHG3-201ENST00000413987 HIVEP3Q5T1R4 2406 aa7.57□□□□□ -1.2
SNHG3-201ENST00000413987 TACC2O95359 2948 aa7.57□□□□□ -1.2
SNHG3-201ENST00000413987 IGHV2-26A0A0B4J1V2 119 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 A0A1W2PRE2 83 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 F8W735 103 aaPredicted RBP7.56□□□□□ -1.2
SNHG3-201ENST00000413987 PRB1P04280 392 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 CBLN1P23435 193 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 TSPOP30536 169 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 RPL8P62917 257 aaKnown RBP7.56□□□□□ -1.2
SNHG3-201ENST00000413987 CX3CL1P78423 397 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 OR1L8Q8NGR8 309 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 OR51H1Q8NH63 302 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 DNAJC30Q96LL9 226 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 CADP27708 2225 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 TRBV6-6A0A0A6YYG2 114 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 C5orf49A4QMS7 147 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 DPRXA6NFQ7 191 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 OR4C46A6NHA9 309 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 CLDN1O95832 211 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 Q6ZS46 218 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 OR10P1Q8NGE3 313 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 DLX4Q92988 240 aaPredicted RBP7.56□□□□□ -1.2
SNHG3-201ENST00000413987 KCNS1Q96KK3 526 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 TMEM204Q9BSN7 226 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 FAM103A1Q9BTL3 118 aaKnown RBP7.56□□□□□ -1.2
SNHG3-201ENST00000413987 MRPL27Q9P0M9 148 aaKnown RBP7.56□□□□□ -1.2
SNHG3-201ENST00000413987 ZNF835Q9Y2P0 537 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 KLF12Q9Y4X4 402 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 LY96Q9Y6Y9 160 aa7.56□□□□□ -1.2
SNHG3-201ENST00000413987 RPL35AP18077 110 aaKnown RBP7.55□□□□□ -1.2
SNHG3-201ENST00000413987 AMTP48728 403 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 FGF12P61328 243 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 RHOGP84095 191 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 IGFBP7Q16270 282 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 OCIAD2Q56VL3 154 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 UNQ5815/PRO19632Q6UWF5 114 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 FAM231DQ6ZW35 169 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 VPS13CQ709C8 3753 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 ROS1P08922 2347 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 IGKV1-6A0A0C4DH72 117 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 SNURFLB1AK76 121 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 RBFOX2O43251 390 aaKnown RBP eCLIP7.55□□□□□ -1.27e-11■■■■□ 20.7
SNHG3-201ENST00000413987 NGFP01138 241 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 IGKV1-39P01597 117 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 IGKV1-5P01602 117 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 IGKV1D-39P04432 117 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 HINT1P49773 126 aaPredicted RBP7.55□□□□□ -1.2
SNHG3-201ENST00000413987 LINC00596Q86U02 117 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 TMEM86BQ8N661 226 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 RDH5Q92781 318 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 BORCS7Q96B45 105 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 BBC3Q96PG8 261 aaPredicted RBP7.55□□□□□ -1.2
SNHG3-201ENST00000413987 NPCDR1Q9BY65 106 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 ASH1LQ9NR48 2969 aaKnown RBP7.55□□□□□ -1.2
SNHG3-201ENST00000413987 IDI2-AS1Q9NZ38 188 aa7.55□□□□□ -1.2
SNHG3-201ENST00000413987 SPTBN1Q01082 2364 aaKnown RBP7.55□□□□□ -1.2
SNHG3-201ENST00000413987 USP9XQ93008 2570 aaPredicted RBP7.54□□□□□ -1.2
SNHG3-201ENST00000413987 CSMD2Q7Z408 3487 aa7.54□□□□□ -1.2
SNHG3-201ENST00000413987 A0A1W2PPI3 338 aa7.54□□□□□ -1.2
SNHG3-201ENST00000413987 IGLC7A0M8Q6 106 aa7.54□□□□□ -1.2
SNHG3-201ENST00000413987 APOHP02749 345 aaPredicted RBP7.54□□□□□ -1.2
SNHG3-201ENST00000413987 GABRA2P47869 451 aa7.54□□□□□ -1.2
SNHG3-201ENST00000413987 RIPPLY3P57055 190 aa7.54□□□□□ -1.2
SNHG3-201ENST00000413987 IZUMO4Q1ZYL8 232 aa7.54□□□□□ -1.2
SNHG3-201ENST00000413987 ADAMTSL5Q6ZMM2 481 aa7.54□□□□□ -1.2
SNHG3-201ENST00000413987 C9orf139Q6ZV77 190 aa7.54□□□□□ -1.2
SNHG3-201ENST00000413987 APOBEC3DQ96AK3 386 aaPredicted RBP7.54□□□□□ -1.2
SNHG3-201ENST00000413987 SFXN3Q9BWM7 321 aa7.54□□□□□ -1.2
SNHG3-201ENST00000413987 GNB4Q9HAV0 340 aa7.54□□□□□ -1.2
SNHG3-201ENST00000413987 ESPL1Q14674 2120 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms