RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 LOC102723971A0A1B0GUV8 181 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 H3BRN7 92 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 BMPR1BO00238 502 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 TCF21O43680 179 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 OR7C2O60412 319 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 NDUFA7O95182 113 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 IFNA1P01562 189 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 LGALS1P09382 135 aaKnown RBP5.13□□□□□ -1.59
VPS41-204ENST00000413141 C8orf88P0DMB2 117 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 BCL2P10415 239 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 PSMB3P49720 205 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 RELQ04864 619 aaPredicted RBP5.13□□□□□ -1.59
VPS41-204ENST00000413141 PMS2P11Q13670 270 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 GUK1Q16774 197 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 FAM209BQ5JX69 171 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 PQLC2Q6ZP29 291 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 IQCF2Q8IXL9 164 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 KLHDC1Q8N7A1 406 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 OR5AU1Q8NGC0 362 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 OR4X2Q8NGF9 303 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 WIPF2Q8TF74 440 aaPredicted RBP5.13□□□□□ -1.59
VPS41-204ENST00000413141 ZNF503Q96F45 646 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 FAM167A-AS1Q96KT0 104 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 SCRT1Q9BWW7 348 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 SLC25A39Q9BZJ4 359 aaPredicted RBP5.13□□□□□ -1.59
VPS41-204ENST00000413141 TMEM231Q9H6L2 316 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 MANBALQ9NQG1 85 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 GNG13Q9P2W3 67 aa5.13□□□□□ -1.59
VPS41-204ENST00000413141 FN1P02751 2386 aaKnown RBP5.13□□□□□ -1.59
VPS41-204ENST00000413141 IGHV3-35A0A0C4DH35 117 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 ANKRD34BA5PLL1 514 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 RBFOX3A6NFN3 312 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 I3L521 148 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 CD5P06127 495 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 OR10J4P0C629 311 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 GP9P14770 177 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 GCHFRP30047 84 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 PPT1P50897 306 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 UBE2L3P68036 154 aaKnown RBP5.12□□□□□ -1.59
VPS41-204ENST00000413141 ICAM4Q14773 271 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 HAGHQ16775 308 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 TCTEX1D4Q5JR98 221 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 ZNF506Q5JVG8 444 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 TOMM20LQ6UXN7 152 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 LINC01006Q8NI28 216 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 UBE2E2Q96LR5 201 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 OR5B12Q96R08 314 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 RARRES2Q99969 163 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 SHANK2-AS3Q9BTD1 123 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 EIF5A2Q9GZV4 153 aaKnown RBP5.12□□□□□ -1.59
VPS41-204ENST00000413141 TREM1Q9NP99 234 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 TMEM167BQ9NRX6 74 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 PGPEP1Q9NXJ5 209 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 PEF1Q9UBV8 284 aaKnown RBP5.12□□□□□ -1.59
VPS41-204ENST00000413141 F8P00451 2351 aa5.12□□□□□ -1.59
VPS41-204ENST00000413141 IGHV3OR16-8A0A075B7F1 116 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 CLPSL1A2RUU4 121 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 C9JQL5 133 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 NDUFA4O00483 81 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 PAGE4O60829 102 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 GGCTO75223 188 aaKnown RBP5.11□□□□□ -1.59
VPS41-204ENST00000413141 SFTA3P0C7M3 94 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 PYYP10082 97 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 ZP3P21754 424 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 TAGLN2P37802 199 aaKnown RBP5.11□□□□□ -1.59
VPS41-204ENST00000413141 MEF2BQ02080 365 aaPredicted RBP5.11□□□□□ -1.59
VPS41-204ENST00000413141 PEA15Q15121 130 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 LEMD1Q68G75 181 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 UNQ9165/PRO28630Q6UXU0 137 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 S100A7AQ86SG5 101 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 STXBP6Q8NFX7 210 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 SUN5Q8TC36 379 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 RXFP4Q8TDU9 374 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 TMEM190Q8WZ59 177 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 FXYD5Q96DB9 178 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 NARS2Q96I59 477 aaKnown RBP5.11□□□□□ -1.59
VPS41-204ENST00000413141 LINC00052Q96N35 136 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 PAXXQ9BUH6 204 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 OR51M1Q9H341 326 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 SMDT1Q9H4I9 107 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 TMEM14CQ9P0S9 112 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 RABAC1Q9UI14 185 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 VAX2Q9UIW0 290 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 ARL2-SNX15V9GYD0 113 aa5.11□□□□□ -1.59
VPS41-204ENST00000413141 IGHV4OR15-8A0A075B7B6 117 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 A0A087WW49 117 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 TMEM218A2RU14 115 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 ZNF98A6NK75 572 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 FAM74A7A6NL05 159 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 KRBOX1C9JBD0 128 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 HSPB1P04792 205 aaKnown RBP5.1□□□□□ -1.59
VPS41-204ENST00000413141 ADCYAP1P18509 176 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 S100A1P23297 94 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 S100A7P31151 101 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 CDX1P47902 265 aaPredicted RBP5.1□□□□□ -1.59
VPS41-204ENST00000413141 ATP5G3P48201 142 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 PROK1P58294 105 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 CD81P60033 236 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 UBE2G2P60604 165 aa5.1□□□□□ -1.59
VPS41-204ENST00000413141 SRSF2Q01130 221 aaKnown RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms