RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 IGKV3-20P01619 116 aa6.11□□□□□ -1.43
PTPN3-203ENST00000412145 FUSP35637 526 aaKnown RBP eCLIP6.11□□□□□ -1.43
PTPN3-203ENST00000412145 TRAV8-3A0A0A6YYJ7 113 aa6.11□□□□□ -1.43
PTPN3-203ENST00000412145 ATP6V0BQ99437 205 aa6.11□□□□□ -1.43
PTPN3-203ENST00000412145 PLAC1Q9HBJ0 212 aa6.11□□□□□ -1.43
PTPN3-203ENST00000412145 CACNA1IQ9P0X4 2223 aa6.11□□□□□ -1.43
PTPN3-203ENST00000412145 LINC01551Q86U37 167 aa6.11□□□□□ -1.43
PTPN3-203ENST00000412145 GLMPQ8WWB7 406 aa6.11□□□□□ -1.43
PTPN3-203ENST00000412145 EPOPA6NHQ4 379 aa6.11□□□□□ -1.43
PTPN3-203ENST00000412145 I3L3M4 83 aa6.11□□□□□ -1.43
PTPN3-203ENST00000412145 OCC1Q8TAD7 63 aa6.11□□□□□ -1.43
PTPN3-203ENST00000412145 TRBV25-1A0A075B6N4 114 aa6.11□□□□□ -1.43
PTPN3-203ENST00000412145 SH2D6Q7Z4S9 175 aa6.11□□□□□ -1.43
PTPN3-203ENST00000412145 MCRIP2Q9BUT9 160 aaKnown RBP6.11□□□□□ -1.43
PTPN3-203ENST00000412145 SIPA1L3O60292 1781 aaPredicted RBP6.1□□□□□ -1.43
PTPN3-203ENST00000412145 ZNF876PQ49A33 203 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 PRR19A6NJB7 356 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 C9JAW5 83 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 H3BTX0 84 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 HERVK_113P63121 156 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 RSPO4Q2I0M5 234 aaPredicted RBP6.1□□□□□ -1.43
PTPN3-203ENST00000412145 TMEM52Q8NDY8 209 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 CHCHD2Q9Y6H1 151 aaPredicted RBP6.1□□□□□ -1.43
PTPN3-203ENST00000412145 SHANK3Q9BYB0 1731 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 GAGE12JA6NER3 117 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 GAGE7O76087 117 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 GAGE12FP0CL80 117 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 GAGE12GP0CL81 117 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 GAGE12IP0CL82 117 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 GAGE4Q13068 117 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 TREML4Q6UXN2 200 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 LINC00114Q6XXX2 140 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 DAZ1Q9NQZ3 744 aaKnown RBP6.1□□□□□ -1.43
PTPN3-203ENST00000412145 DOCK8Q8NF50 2099 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 MYLKQ15746 1914 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 ATOX1O00244 68 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 THBDP07204 575 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 PDE6GP18545 87 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 SPINK2P20155 84 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 RNF152Q8N8N0 203 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 SIGLEC12Q96PQ1 595 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 KLHDC3Q9BQ90 382 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 CASP8AP2Q9UKL3 1982 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 IGKV1-8A0A0C4DH67 115 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 LIME1Q9H400 295 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 K7EP34 96 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 AMELYQ99218 206 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 GTSF1LQ9H1H1 148 aa6.1□□□□□ -1.43
PTPN3-203ENST00000412145 A0A1W2PPI3 338 aa6.09□□□□□ -1.43
PTPN3-203ENST00000412145 J3KT08 172 aa6.09□□□□□ -1.43
PTPN3-203ENST00000412145 MRAPQ8TCY5 172 aa6.09□□□□□ -1.43
PTPN3-203ENST00000412145 CSTL1Q9H114 145 aa6.09□□□□□ -1.43
PTPN3-203ENST00000412145 CEP250Q9BV73 2442 aa6.09□□□□□ -1.43
PTPN3-203ENST00000412145 PRSS46E5RG02 174 aa6.09□□□□□ -1.43
PTPN3-203ENST00000412145 FOXG1P55316 489 aaPredicted RBP6.09□□□□□ -1.43
PTPN3-203ENST00000412145 PRSS47A8MTI9 375 aa6.09□□□□□ -1.43
PTPN3-203ENST00000412145 E9PLN8 166 aa6.09□□□□□ -1.43
PTPN3-203ENST00000412145 TMEM14EPQ6UXP3 125 aa6.09□□□□□ -1.43
PTPN3-203ENST00000412145 Q8N8P6 123 aa6.09□□□□□ -1.43
PTPN3-203ENST00000412145 BMPERQ8N8U9 685 aa6.09□□□□□ -1.43
PTPN3-203ENST00000412145 CRLF1O75462 422 aa6.09□□□□□ -1.43
PTPN3-203ENST00000412145 HTN3P15516 51 aa6.09□□□□□ -1.43
PTPN3-203ENST00000412145 COLCA2A8K830 154 aa6.09□□□□□ -1.43
PTPN3-203ENST00000412145 C9JQL5 133 aa6.09□□□□□ -1.43
PTPN3-203ENST00000412145 IGFBPL1Q8WX77 278 aa6.09□□□□□ -1.43
PTPN3-203ENST00000412145 GATA2P23769 480 aaPredicted RBP6.09□□□□□ -1.44
PTPN3-203ENST00000412145 HERV-K104P63124 156 aa6.09□□□□□ -1.44
PTPN3-203ENST00000412145 LRRK1Q38SD2 2015 aa6.09□□□□□ -1.44
PTPN3-203ENST00000412145 C15orf32Q32M92 178 aa6.09□□□□□ -1.44
PTPN3-203ENST00000412145 ANKRD29Q8N6D5 301 aa6.09□□□□□ -1.44
PTPN3-203ENST00000412145 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.08□□□□□ -1.44
PTPN3-203ENST00000412145 CEP290O15078 2479 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 TRGV1A0A0A0MS02 117 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 CFHR1Q03591 330 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 ZC2HC1BQ5TFG8 222 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 RNF126Q9BV68 326 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 LSM4Q9Y4Z0 139 aaKnown RBP6.08□□□□□ -1.44
PTPN3-203ENST00000412145 ZNF831Q5JPB2 1677 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 C20orf78Q9BR46 151 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 SPANXB1Q9NS25 103 aaPredicted RBP6.08□□□□□ -1.44
PTPN3-203ENST00000412145 SRRM4A7MD48 611 aaKnown RBP6.08□□□□□ -1.44
PTPN3-203ENST00000412145 NMSQ5H8A3 153 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 NUP35Q8NFH5 326 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 PRO1854Q9UHT4 67 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 APOC4P55056 127 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 LCN12Q6JVE5 192 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 IMMP1LQ96LU5 166 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 NDUFB1O75438 58 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 FAM231DQ6ZW35 169 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 MESP1Q9BRJ9 268 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 SRRM5B3KS81 715 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 CHKB-CPT1BH3BT56 60 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 SNRPCP09234 159 aaKnown RBP6.08□□□□□ -1.44
PTPN3-203ENST00000412145 GNG5P63218 68 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 LYZL1Q6UWQ5 148 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 ST6GALNAC3Q8NDV1 305 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 SPSB2Q99619 263 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 PYGO2Q9BRQ0 406 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 DOCK5Q9H7D0 1870 aa6.08□□□□□ -1.44
PTPN3-203ENST00000412145 HGFACQ04756 655 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms