RNA–Protein interactions for RNA: ENST00000412104.6

VRK2-202, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene VRK2, Length 1,916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-202ENST00000412104 THYN1Q9P016 225 aa19.28■□□□□ 0.68
VRK2-202ENST00000412104 H3BRN7 92 aa19.27■□□□□ 0.68
VRK2-202ENST00000412104 NDUFB8O95169 186 aa19.27■□□□□ 0.68
VRK2-202ENST00000412104 PRB1P04280 392 aa19.27■□□□□ 0.68
VRK2-202ENST00000412104 YPEL3P61236 119 aaPredicted RBP19.27■□□□□ 0.68
VRK2-202ENST00000412104 TMEM183BQ1AE95 376 aa19.27■□□□□ 0.68
VRK2-202ENST00000412104 CLEC2AQ6UVW9 174 aa19.27■□□□□ 0.68
VRK2-202ENST00000412104 BAGE2Q86Y30 109 aa19.27■□□□□ 0.68
VRK2-202ENST00000412104 C5orf17Q8NAS9 161 aa19.27■□□□□ 0.68
VRK2-202ENST00000412104 C21orf62Q9NYP8 219 aa19.27■□□□□ 0.68
VRK2-202ENST00000412104 WI2-2373I1.2A0A1W2PRP0 233 aa19.27■□□□□ 0.67
VRK2-202ENST00000412104 OR2J3O76001 311 aa19.27■□□□□ 0.67
VRK2-202ENST00000412104 Q56UQ5 140 aa19.27■□□□□ 0.67
VRK2-202ENST00000412104 ZNF586Q9NXT0 402 aa19.27■□□□□ 0.67
VRK2-202ENST00000412104 RPH3ALQ9UNE2 315 aa19.27■□□□□ 0.67
VRK2-202ENST00000412104 SPTAN1Q13813 2472 aaKnown RBP19.26■□□□□ 0.67
VRK2-202ENST00000412104 XKRY2A2RUG3 117 aa19.26■□□□□ 0.67
VRK2-202ENST00000412104 HIST1H1EP10412 219 aaKnown RBP19.26■□□□□ 0.67
VRK2-202ENST00000412104 TMEM183AQ8IXX5 376 aa19.26■□□□□ 0.67
VRK2-202ENST00000412104 ATG101Q9BSB4 218 aa19.26■□□□□ 0.67
VRK2-202ENST00000412104 UBE2G1P62253 170 aa19.25■□□□□ 0.67
VRK2-202ENST00000412104 OR8I2Q8N0Y5 310 aa19.25■□□□□ 0.67
VRK2-202ENST00000412104 TMEM68Q96MH6 324 aa19.25■□□□□ 0.67
VRK2-202ENST00000412104 COA6Q5JTJ3 125 aaKnown RBP19.25■□□□□ 0.67
VRK2-202ENST00000412104 KLF12Q9Y4X4 402 aa19.25■□□□□ 0.67
VRK2-202ENST00000412104 COL12A1Q99715 3063 aa19.25■□□□□ 0.67
VRK2-202ENST00000412104 CACNA1BQ00975 2339 aa19.24■□□□□ 0.67
VRK2-202ENST00000412104 IGHV3OR16-10A0A075B7F0 116 aa19.24■□□□□ 0.67
VRK2-202ENST00000412104 IGHV4-30-2A0A087WSY4 118 aa19.24■□□□□ 0.67
VRK2-202ENST00000412104 IGHV3-23P01764 117 aa19.24■□□□□ 0.67
VRK2-202ENST00000412104 OTORQ9NRC9 128 aa19.24■□□□□ 0.67
VRK2-202ENST00000412104 USP24Q9UPU5 2620 aa19.23■□□□□ 0.67
VRK2-202ENST00000412104 ATP6V0E1O15342 81 aa19.23■□□□□ 0.67
VRK2-202ENST00000412104 USF2Q15853 346 aaPredicted RBP19.23■□□□□ 0.67
VRK2-202ENST00000412104 BPIFA4PQ86YQ2 179 aa19.23■□□□□ 0.67
VRK2-202ENST00000412104 FAM110DQ8TAY7 271 aaPredicted RBP19.23■□□□□ 0.67
VRK2-202ENST00000412104 CSMD1Q96PZ7 3565 aa19.23■□□□□ 0.67
VRK2-202ENST00000412104 IGHV1-69DA0A0B4J2H0 117 aa19.23■□□□□ 0.67
VRK2-202ENST00000412104 IGHV1-69P01742 117 aa19.23■□□□□ 0.67
VRK2-202ENST00000412104 TCRAP04437 139 aa19.23■□□□□ 0.67
VRK2-202ENST00000412104 ECSCRQ19T08 205 aa19.23■□□□□ 0.67
VRK2-202ENST00000412104 OR10D4PQ8NGN7 298 aa19.23■□□□□ 0.67
VRK2-202ENST00000412104 SGK494Q96LW2 274 aa19.23■□□□□ 0.67
VRK2-202ENST00000412104 BBC3Q96PG8 261 aaPredicted RBP19.23■□□□□ 0.67
VRK2-202ENST00000412104 TMUB1Q9BVT8 246 aa19.23■□□□□ 0.67
VRK2-202ENST00000412104 SERTAD4Q9NUC0 356 aa19.23■□□□□ 0.67
VRK2-202ENST00000412104 FBXL7Q9UJT9 491 aa19.23■□□□□ 0.67
VRK2-202ENST00000412104 USP9XQ93008 2570 aaPredicted RBP19.22■□□□□ 0.67
VRK2-202ENST00000412104 ZNF705GA8MUZ8 300 aaPredicted RBP19.22■□□□□ 0.67
VRK2-202ENST00000412104 FABP4P15090 132 aa19.22■□□□□ 0.67
VRK2-202ENST00000412104 CBLN1P23435 193 aa19.22■□□□□ 0.67
VRK2-202ENST00000412104 UNQ5815/PRO19632Q6UWF5 114 aa19.22■□□□□ 0.67
VRK2-202ENST00000412104 FAM231DQ6ZW35 169 aa19.22■□□□□ 0.67
VRK2-202ENST00000412104 TRAV40A0A0B4J280 105 aa19.21■□□□□ 0.67
VRK2-202ENST00000412104 C7orf69Q9H7B7 122 aa19.21■□□□□ 0.67
VRK2-202ENST00000412104 SVEP1Q4LDE5 3571 aa19.21■□□□□ 0.67
VRK2-202ENST00000412104 FLNCQ14315 2725 aa19.21■□□□□ 0.67
VRK2-202ENST00000412104 OR2T8A6NH00 312 aa19.21■□□□□ 0.67
VRK2-202ENST00000412104 IGLC2P0DOY2 106 aa19.21■□□□□ 0.67
VRK2-202ENST00000412104 FCGR2BP31994 310 aaPredicted RBP19.21■□□□□ 0.67
VRK2-202ENST00000412104 TCL1AP56279 114 aa19.21■□□□□ 0.67
VRK2-202ENST00000412104 BCL6BQ8N143 479 aaPredicted RBP19.21■□□□□ 0.67
VRK2-202ENST00000412104 OR4F17Q8NGA8 305 aa19.21■□□□□ 0.67
VRK2-202ENST00000412104 SMIM12Q96EX1 92 aa19.21■□□□□ 0.67
VRK2-202ENST00000412104 FMC1Q96HJ9 113 aa19.21■□□□□ 0.67
VRK2-202ENST00000412104 HIST1H2BLQ99880 126 aa19.21■□□□□ 0.67
VRK2-202ENST00000412104 NIT2Q9NQR4 276 aa19.21■□□□□ 0.67
VRK2-202ENST00000412104 SMIM27A0A1W2PRY6 76 aa19.2■□□□□ 0.66
VRK2-202ENST00000412104 ADMP35318 185 aa19.2■□□□□ 0.66
VRK2-202ENST00000412104 BRD3OSQ6XYD6 125 aa19.2■□□□□ 0.66
VRK2-202ENST00000412104 EXOC3-AS1Q8N2X6 119 aa19.2■□□□□ 0.66
VRK2-202ENST00000412104 C5orf56Q8N8D9 126 aa19.2■□□□□ 0.66
VRK2-202ENST00000412104 GPR82Q96P67 336 aa19.2■□□□□ 0.66
VRK2-202ENST00000412104 TRBV19A0A075B6N1 114 aa19.19■□□□□ 0.66
VRK2-202ENST00000412104 SH2D7A6NKC9 451 aaPredicted RBP19.19■□□□□ 0.66
VRK2-202ENST00000412104 MRPS12O15235 138 aaKnown RBP19.19■□□□□ 0.66
VRK2-202ENST00000412104 FRMD6-AS1P0C7T7 363 aa19.19■□□□□ 0.66
VRK2-202ENST00000412104 RNF24Q9Y225 148 aa19.19■□□□□ 0.66
VRK2-202ENST00000412104 CA1P00915 261 aaPredicted RBP19.19■□□□□ 0.66
VRK2-202ENST00000412104 IER3P46695 156 aa19.19■□□□□ 0.66
VRK2-202ENST00000412104 PYY3Q5JQD4 70 aa19.19■□□□□ 0.66
VRK2-202ENST00000412104 PRR27Q6MZM9 219 aa19.19■□□□□ 0.66
VRK2-202ENST00000412104 TXN2Q99757 166 aa19.19■□□□□ 0.66
VRK2-202ENST00000412104 SCGB2A1O75556 95 aa19.18■□□□□ 0.66
VRK2-202ENST00000412104 LTAP01374 205 aa19.18■□□□□ 0.66
VRK2-202ENST00000412104 CTSGP08311 255 aa19.18■□□□□ 0.66
VRK2-202ENST00000412104 KLK9Q2XQG4 91 aa19.18■□□□□ 0.66
VRK2-202ENST00000412104 S100A7AQ86SG5 101 aa19.18■□□□□ 0.66
VRK2-202ENST00000412104 NUDT10Q8NFP7 164 aa19.18■□□□□ 0.66
VRK2-202ENST00000412104 VN1R17PQ8TDU5 208 aa19.18■□□□□ 0.66
VRK2-202ENST00000412104 NUDT11Q96G61 164 aa19.18■□□□□ 0.66
VRK2-202ENST00000412104 C17orf77Q96MU5 243 aa19.18■□□□□ 0.66
VRK2-202ENST00000412104 KLK9Q9UKQ9 250 aa19.18■□□□□ 0.66
VRK2-202ENST00000412104 LINC01548A6NM66 108 aa19.17■□□□□ 0.66
VRK2-202ENST00000412104 GATCO43716 136 aaKnown RBP19.17■□□□□ 0.66
VRK2-202ENST00000412104 TMEM219Q86XT9 240 aa19.17■□□□□ 0.66
VRK2-202ENST00000412104 NRGNQ92686 78 aa19.17■□□□□ 0.66
VRK2-202ENST00000412104 MBD6Q96DN6 1003 aa19.17■□□□□ 0.66
VRK2-202ENST00000412104 MLST8Q9BVC4 326 aa19.17■□□□□ 0.66
VRK2-202ENST00000412104 MRPL18Q9H0U6 180 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms