RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 HIST1H2BKO60814 126 aa2.59□□□□□ -2
BRCA1-204ENST00000412061 HIST1H2BJP06899 126 aa2.59□□□□□ -2
BRCA1-204ENST00000412061 PAEPP09466 180 aa2.59□□□□□ -2
BRCA1-204ENST00000412061 CRYGAP11844 174 aa2.59□□□□□ -2
BRCA1-204ENST00000412061 HLA-EP13747 358 aa2.59□□□□□ -2
BRCA1-204ENST00000412061 EVI2AP22794 236 aa2.59□□□□□ -2
BRCA1-204ENST00000412061 MYL5Q02045 173 aa2.59□□□□□ -2
BRCA1-204ENST00000412061 RELAQ04206 551 aa2.59□□□□□ -2
BRCA1-204ENST00000412061 MOBPQ13875 183 aa2.59□□□□□ -2
BRCA1-204ENST00000412061 SLC30A7Q8NEW0 376 aa2.59□□□□□ -2
BRCA1-204ENST00000412061 AQP3Q92482 292 aa2.59□□□□□ -2
BRCA1-204ENST00000412061 CBLN4Q9NTU7 201 aa2.59□□□□□ -2
BRCA1-204ENST00000412061 OR5AC2Q9NZP5 309 aa2.59□□□□□ -2
BRCA1-204ENST00000412061 BAIAP2Q9UQB8 552 aa2.59□□□□□ -2
BRCA1-204ENST00000412061 IGLV2-18A0A075B6J9 118 aa2.58□□□□□ -2
BRCA1-204ENST00000412061 A0A0D9SG52 128 aa2.58□□□□□ -2
BRCA1-204ENST00000412061 LY6LH3BQJ8 138 aa2.58□□□□□ -2
BRCA1-204ENST00000412061 RAB5CP51148 216 aa2.58□□□□□ -2
BRCA1-204ENST00000412061 DYNLT1P63172 113 aa2.58□□□□□ -2
BRCA1-204ENST00000412061 PYDC2Q56P42 97 aa2.58□□□□□ -2
BRCA1-204ENST00000412061 PABPC1L2AQ5JQF8 200 aa2.58□□□□□ -2
BRCA1-204ENST00000412061 PHF5AQ7RTV0 110 aaKnown RBP2.58□□□□□ -2
BRCA1-204ENST00000412061 OR4E2Q8NGC2 313 aa2.58□□□□□ -2
BRCA1-204ENST00000412061 C1orf54Q8WWF1 131 aa2.58□□□□□ -2
BRCA1-204ENST00000412061 ZNF471Q9BX82 626 aaPredicted RBP2.58□□□□□ -2
BRCA1-204ENST00000412061 LPAR5Q9H1C0 372 aa2.58□□□□□ -2
BRCA1-204ENST00000412061 CALML5Q9NZT1 146 aa2.58□□□□□ -2
BRCA1-204ENST00000412061 HS3ST2Q9Y278 367 aa2.58□□□□□ -2
BRCA1-204ENST00000412061 RIC1Q4ADV7 1423 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 ARHGAP32A7KAX9 2087 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 CDK5RAP2Q96SN8 1893 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 IGKV2-28A0A075B6P5 120 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 MEIKINA0A087WXM9 373 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 TRAV13-1A0A0B4J241 112 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 A0A1B0GVG6 124 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 A0A1W2PNU3 283 aaPredicted RBP2.57□□□□□ -2
BRCA1-204ENST00000412061 C7orf71A4D174 169 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 TPST1O60507 370 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 IGKV2D-28P01615 120 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 APOC1P02654 83 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 SHBGP04278 402 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 IGKV3-11P04433 115 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 HRES1P13985 223 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 FXYD2P54710 66 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 NEDD8Q15843 81 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 GLYATL3Q5SZD4 288 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 TMEM244Q5VVB8 128 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 KRTAP5-2Q701N4 177 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 C3orf56Q8N813 242 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 OR5D16Q8NGK9 328 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 OVOS2A0A0J9YW53 1432 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 OVOS2Q6IE36 1432 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 CPAMD8Q8IZJ3 1885 aa2.57□□□□□ -2
BRCA1-204ENST00000412061 MYO5AQ9Y4I1 1855 aaKnown RBP2.57□□□□□ -2
BRCA1-204ENST00000412061 ANAPC1Q9H1A4 1944 aa2.56□□□□□ -2
BRCA1-204ENST00000412061 IGHV1-18A0A0C4DH31 117 aa2.56□□□□□ -2
BRCA1-204ENST00000412061 H3BMG7 143 aa2.56□□□□□ -2
BRCA1-204ENST00000412061 SDCBPO00560 298 aaPredicted RBP2.56□□□□□ -2
BRCA1-204ENST00000412061 RER1O15258 196 aa2.56□□□□□ -2
BRCA1-204ENST00000412061 DLEU1O43261 78 aa2.56□□□□□ -2
BRCA1-204ENST00000412061 TIMM17BO60830 172 aa2.56□□□□□ -2
BRCA1-204ENST00000412061 MT-ND6P03923 174 aa2.56□□□□□ -2
BRCA1-204ENST00000412061 CLPSP04118 112 aa2.56□□□□□ -2
BRCA1-204ENST00000412061 IFNA4P05014 189 aa2.56□□□□□ -2
BRCA1-204ENST00000412061 COX6A1P12074 109 aa2.56□□□□□ -2
BRCA1-204ENST00000412061 RRAS2P62070 204 aaPredicted RBP2.56□□□□□ -2
BRCA1-204ENST00000412061 NCS1P62166 190 aa2.56□□□□□ -2
BRCA1-204ENST00000412061 DEFB134Q4QY38 66 aa2.56□□□□□ -2
BRCA1-204ENST00000412061 WFDC11Q8NEX6 87 aa2.56□□□□□ -2
BRCA1-204ENST00000412061 OR5H6Q8NGV6 325 aa2.56□□□□□ -2
BRCA1-204ENST00000412061 OR4K15Q8NH41 348 aa2.56□□□□□ -2
BRCA1-204ENST00000412061 C2orf88Q9BSF0 95 aa2.56□□□□□ -2
BRCA1-204ENST00000412061 ERG28Q9UKR5 140 aa2.56□□□□□ -2
BRCA1-204ENST00000412061 FANCMQ8IYD8 2048 aa2.56□□□□□ -2
BRCA1-204ENST00000412061 DSPPQ9NZW4 1301 aa2.56□□□□□ -2
BRCA1-204ENST00000412061 MIF4GDA9UHW6 222 aaKnown RBP2.55□□□□□ -2
BRCA1-204ENST00000412061 KDELR1P24390 212 aa2.55□□□□□ -2
BRCA1-204ENST00000412061 RPL22P35268 128 aaKnown RBP2.55□□□□□ -2
BRCA1-204ENST00000412061 LCN15Q6UWW0 184 aa2.55□□□□□ -2
BRCA1-204ENST00000412061 TMEM14EPQ6UXP3 125 aa2.55□□□□□ -2
BRCA1-204ENST00000412061 AAED1Q7RTV5 226 aa2.55□□□□□ -2
BRCA1-204ENST00000412061 MRPS24Q96EL2 167 aaKnown RBP2.55□□□□□ -2
BRCA1-204ENST00000412061 TP53RKQ96S44 253 aa2.55□□□□□ -2
BRCA1-204ENST00000412061 BCL2L10Q9HD36 194 aa2.55□□□□□ -2
BRCA1-204ENST00000412061 TNFSF18Q9UNG2 199 aa2.55□□□□□ -2
BRCA1-204ENST00000412061 SEC16AO15027 2179 aa2.55□□□□□ -2
BRCA1-204ENST00000412061 SPEF2Q9C093 1822 aa2.55□□□□□ -2
BRCA1-204ENST00000412061 IGLV3-9A0A075B6K5 115 aa2.54□□□□□ -2
BRCA1-204ENST00000412061 A0A1W2PNM2 257 aa2.54□□□□□ -2
BRCA1-204ENST00000412061 J3QR89 54 aa2.54□□□□□ -2
BRCA1-204ENST00000412061 K7ERU9 68 aa2.54□□□□□ -2
BRCA1-204ENST00000412061 TRGC1P0CF51 173 aa2.54□□□□□ -2
BRCA1-204ENST00000412061 CRYGSP22914 178 aa2.54□□□□□ -2
BRCA1-204ENST00000412061 FUSP35637 526 aaKnown RBP eCLIP2.54□□□□□ -2
BRCA1-204ENST00000412061 RPS25P62851 125 aaKnown RBP2.54□□□□□ -2
BRCA1-204ENST00000412061 NDUFA5Q16718 116 aa2.54□□□□□ -2
BRCA1-204ENST00000412061 PATE2Q6UY27 113 aa2.54□□□□□ -2
BRCA1-204ENST00000412061 C7orf65Q6ZTY9 151 aa2.54□□□□□ -2
BRCA1-204ENST00000412061 PRELID3AQ96N28 172 aa2.54□□□□□ -2
BRCA1-204ENST00000412061 BANF2Q9H503 90 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 1000.6 ms