RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 CASC2Q6XLA1 102 aa-1.18□□□□□ -2.6
RNU2-55P-201ENST00000411146 FUNDC1Q8IVP5 155 aa-1.18□□□□□ -2.6
RNU2-55P-201ENST00000411146 SLC30A7Q8NEW0 376 aa-1.18□□□□□ -2.6
RNU2-55P-201ENST00000411146 OR5D14Q8NGL3 314 aa-1.18□□□□□ -2.6
RNU2-55P-201ENST00000411146 DNAJB3Q8WWF6 145 aa-1.18□□□□□ -2.6
RNU2-55P-201ENST00000411146 LPAR5Q9H1C0 372 aa-1.18□□□□□ -2.6
RNU2-55P-201ENST00000411146 AGPAT3Q9NRZ7 376 aa-1.18□□□□□ -2.6
RNU2-55P-201ENST00000411146 OPTCQ9UBM4 332 aa-1.18□□□□□ -2.6
RNU2-55P-201ENST00000411146 F5P12259 2224 aa-1.18□□□□□ -2.6
RNU2-55P-201ENST00000411146 MAP2P11137 1827 aaKnown RBP-1.18□□□□□ -2.6
RNU2-55P-201ENST00000411146 TRPM7Q96QT4 1865 aa-1.18□□□□□ -2.6
RNU2-55P-201ENST00000411146 NUP98P52948 1817 aa-1.19□□□□□ -2.6
RNU2-55P-201ENST00000411146 AFDNP55196 1824 aaKnown RBP-1.19□□□□□ -2.6
RNU2-55P-201ENST00000411146 C1orf196B1AJZ1 125 aa-1.19□□□□□ -2.6
RNU2-55P-201ENST00000411146 LAMA5O15230 3695 aa-1.19□□□□□ -2.6
RNU2-55P-201ENST00000411146 ERC2-IT1O76042 136 aa-1.19□□□□□ -2.6
RNU2-55P-201ENST00000411146 PET100P0DJ07 73 aa-1.19□□□□□ -2.6
RNU2-55P-201ENST00000411146 NAA20P61599 178 aa-1.19□□□□□ -2.6
RNU2-55P-201ENST00000411146 KRTAP19-8Q3LI54 63 aa-1.19□□□□□ -2.6
RNU2-55P-201ENST00000411146 C1orf134Q5TEV5 83 aa-1.19□□□□□ -2.6
RNU2-55P-201ENST00000411146 C4orf22Q6V702 233 aa-1.19□□□□□ -2.6
RNU2-55P-201ENST00000411146 OR2T10Q8NGZ9 312 aa-1.19□□□□□ -2.6
RNU2-55P-201ENST00000411146 HIST1H2BLQ99880 126 aa-1.19□□□□□ -2.6
RNU2-55P-201ENST00000411146 NIPSNAP1Q9BPW8 284 aa-1.19□□□□□ -2.6
RNU2-55P-201ENST00000411146 PRADC1Q9BSG0 188 aa-1.19□□□□□ -2.6
RNU2-55P-201ENST00000411146 OR51I1Q9H343 314 aa-1.19□□□□□ -2.6
RNU2-55P-201ENST00000411146 FLNBO75369 2602 aaKnown RBP-1.19□□□□□ -2.6
RNU2-55P-201ENST00000411146 A0A1W2PRS3 328 aa-1.2□□□□□ -2.6
RNU2-55P-201ENST00000411146 C7orf71A4D174 169 aa-1.2□□□□□ -2.6
RNU2-55P-201ENST00000411146 E7EUB6 86 aa-1.2□□□□□ -2.6
RNU2-55P-201ENST00000411146 F8VZ95 297 aa-1.2□□□□□ -2.6
RNU2-55P-201ENST00000411146 RNASE4P34096 147 aaKnown RBP-1.2□□□□□ -2.6
RNU2-55P-201ENST00000411146 CAV3P56539 151 aa-1.2□□□□□ -2.6
RNU2-55P-201ENST00000411146 DSCR4P56555 118 aaPredicted RBP-1.2□□□□□ -2.6
RNU2-55P-201ENST00000411146 EIF3IQ13347 325 aaKnown RBP-1.2□□□□□ -2.6
RNU2-55P-201ENST00000411146 BATFQ16520 125 aa-1.2□□□□□ -2.6
RNU2-55P-201ENST00000411146 MALSU1Q96EH3 234 aa-1.2□□□□□ -2.6
RNU2-55P-201ENST00000411146 CCDC94Q9BW85 323 aaPredicted RBP-1.2□□□□□ -2.6
RNU2-55P-201ENST00000411146 HSPB8Q9UJY1 196 aa-1.2□□□□□ -2.6
RNU2-55P-201ENST00000411146 NEO1Q92859 1461 aa-1.2□□□□□ -2.6
RNU2-55P-201ENST00000411146 HERC2O95714 4834 aa-1.2□□□□□ -2.6
RNU2-55P-201ENST00000411146 LAMC3Q9Y6N6 1575 aa-1.21□□□□□ -2.6
RNU2-55P-201ENST00000411146 FLGP20930 4061 aaPredicted RBP-1.21□□□□□ -2.6
RNU2-55P-201ENST00000411146 WRNQ14191 1432 aaPredicted RBP eCLIP-1.21□□□□□ -2.6
RNU2-55P-201ENST00000411146 A0A087X0T9 212 aa-1.21□□□□□ -2.6
RNU2-55P-201ENST00000411146 LOC100506127A0A0U1RQW1 187 aa-1.21□□□□□ -2.6
RNU2-55P-201ENST00000411146 IFNA10P01566 189 aa-1.21□□□□□ -2.6
RNU2-55P-201ENST00000411146 HLA-DRB1P01911 266 aa-1.21□□□□□ -2.6
RNU2-55P-201ENST00000411146 APOA1P02647 267 aa-1.21□□□□□ -2.6
RNU2-55P-201ENST00000411146 ISG15P05161 165 aa-1.21□□□□□ -2.6
RNU2-55P-201ENST00000411146 PMAIP1Q13794 54 aa-1.21□□□□□ -2.6
RNU2-55P-201ENST00000411146 SPINK13Q1W4C9 94 aa-1.21□□□□□ -2.6
RNU2-55P-201ENST00000411146 Q3ZCU0 254 aa-1.21□□□□□ -2.6
RNU2-55P-201ENST00000411146 SDHAF4Q5VUM1 108 aa-1.21□□□□□ -2.6
RNU2-55P-201ENST00000411146 TRAPPC6BQ86SZ2 158 aa-1.21□□□□□ -2.6
RNU2-55P-201ENST00000411146 GDPD1Q8N9F7 314 aa-1.21□□□□□ -2.6
RNU2-55P-201ENST00000411146 PKIGQ9Y2B9 76 aa-1.21□□□□□ -2.6
RNU2-55P-201ENST00000411146 ROBO3Q96MS0 1386 aa-1.21□□□□□ -2.6
RNU2-55P-201ENST00000411146 EEF1E1-BLOC1S5C9J1V9 151 aa-1.22□□□□□ -2.6
RNU2-55P-201ENST00000411146 IGLV1-51P01701 117 aa-1.22□□□□□ -2.6
RNU2-55P-201ENST00000411146 TPM2P07951 284 aa-1.22□□□□□ -2.6
RNU2-55P-201ENST00000411146 PPIBP23284 216 aaKnown RBP-1.22□□□□□ -2.6
RNU2-55P-201ENST00000411146 S100A4P26447 101 aaKnown RBP-1.22□□□□□ -2.6
RNU2-55P-201ENST00000411146 SNRPD2P62316 118 aaKnown RBP-1.22□□□□□ -2.6
RNU2-55P-201ENST00000411146 ZNF56Q15929 161 aa-1.22□□□□□ -2.6
RNU2-55P-201ENST00000411146 TMEM14EPQ6UXP3 125 aa-1.22□□□□□ -2.6
RNU2-55P-201ENST00000411146 CANT1Q8WVQ1 401 aa-1.22□□□□□ -2.6
RNU2-55P-201ENST00000411146 RAB37Q96AX2 223 aa-1.22□□□□□ -2.6
RNU2-55P-201ENST00000411146 LINC00208Q96KT6 92 aa-1.22□□□□□ -2.6
RNU2-55P-201ENST00000411146 SIKE1Q9BRV8 207 aa-1.22□□□□□ -2.6
RNU2-55P-201ENST00000411146 UPF3BQ9BZI7 483 aaKnown RBP-1.22□□□□□ -2.6
RNU2-55P-201ENST00000411146 SPANXB1Q9NS25 103 aaPredicted RBP-1.22□□□□□ -2.6
RNU2-55P-201ENST00000411146 UNC13BO14795 1591 aa-1.22□□□□□ -2.61
RNU2-55P-201ENST00000411146 CSPG4Q6UVK1 2322 aa-1.22□□□□□ -2.61
RNU2-55P-201ENST00000411146 SPTBN1Q01082 2364 aaKnown RBP-1.22□□□□□ -2.61
RNU2-55P-201ENST00000411146 TGP01266 2768 aa-1.23□□□□□ -2.61
RNU2-55P-201ENST00000411146 CYB5BO43169 146 aa-1.23□□□□□ -2.61
RNU2-55P-201ENST00000411146 IVLP07476 585 aa-1.23□□□□□ -2.61
RNU2-55P-201ENST00000411146 CD79AP11912 226 aa-1.23□□□□□ -2.61
RNU2-55P-201ENST00000411146 RPS12P25398 132 aaKnown RBP-1.23□□□□□ -2.61
RNU2-55P-201ENST00000411146 SRIP30626 198 aa-1.23□□□□□ -2.61
RNU2-55P-201ENST00000411146 RPL5P46777 297 aaKnown RBP-1.23□□□□□ -2.61
RNU2-55P-201ENST00000411146 BLVRAP53004 296 aa-1.23□□□□□ -2.61
RNU2-55P-201ENST00000411146 KRTAP20-2Q3LI61 65 aa-1.23□□□□□ -2.61
RNU2-55P-201ENST00000411146 OR5AS1Q8N127 324 aa-1.23□□□□□ -2.61
RNU2-55P-201ENST00000411146 TMEM86BQ8N661 226 aa-1.23□□□□□ -2.61
RNU2-55P-201ENST00000411146 OR10K1Q8NGX5 313 aa-1.23□□□□□ -2.61
RNU2-55P-201ENST00000411146 PBOV1Q9GZY1 135 aa-1.23□□□□□ -2.61
RNU2-55P-201ENST00000411146 C3orf18Q9UK00 162 aa-1.23□□□□□ -2.61
RNU2-55P-201ENST00000411146 NUP210LQ5VU65 1888 aa-1.23□□□□□ -2.61
RNU2-55P-201ENST00000411146 PKHD1P08F94 4074 aa-1.23□□□□□ -2.61
RNU2-55P-201ENST00000411146 TMEM213A2RRL7 107 aa-1.24□□□□□ -2.61
RNU2-55P-201ENST00000411146 C9orf170A2RU37 121 aa-1.24□□□□□ -2.61
RNU2-55P-201ENST00000411146 CXCR6O00574 342 aa-1.24□□□□□ -2.61
RNU2-55P-201ENST00000411146 UCHL3P15374 230 aa-1.24□□□□□ -2.61
RNU2-55P-201ENST00000411146 ANP32AP39687 249 aaKnown RBP-1.24□□□□□ -2.61
RNU2-55P-201ENST00000411146 DEFA3P59666 94 aa-1.24□□□□□ -2.61
RNU2-55P-201ENST00000411146 YPEL3P61236 119 aaPredicted RBP-1.24□□□□□ -2.61
RNU2-55P-201ENST00000411146 RHOBP62745 196 aa-1.24□□□□□ -2.61
RNU2-55P-201ENST00000411146 MLLT11Q13015 90 aaPredicted RBP-1.24□□□□□ -2.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms