RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 LEPROTO15243 131 aa9.33□□□□□ -0.92
PRPF40A-202ENST00000410080 GTF3AQ92664 365 aaKnown RBP9.33□□□□□ -0.92
PRPF40A-202ENST00000410080 C1QTNF4Q9BXJ3 329 aa9.33□□□□□ -0.92
PRPF40A-202ENST00000410080 ATP5G3P48201 142 aa9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 NHP2Q9NX24 153 aaKnown RBP9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 CD55P08174 381 aa9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 ZNF883P0CG24 379 aa9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 SMIM10L1P0DMW3 83 aa9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 LAGE3Q14657 143 aa9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 CD300EQ496F6 205 aaPredicted RBP9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 ZNF876PQ49A33 203 aa9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 SMIM10Q96HG1 83 aa9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 TRBV7-1A0A0A6YYK4 115 aa9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 TRBV5-5A0A0J9YX44 114 aa9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 SNHG12Q9BXW3 62 aa9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 IGHV2-26A0A0B4J1V2 119 aa9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 CA7P43166 264 aa9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 RBM38Q9H0Z9 239 aaKnown RBP9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 ZNF708P17019 499 aa9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 C1orf122Q6ZSJ8 110 aa9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 KLF12Q9Y4X4 402 aa9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 TRAV25A0A0B4J276 109 aa9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 MORN2Q502X0 79 aa9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 IL17RELQ6ZVW7 336 aa9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 SLC25A39Q9BZJ4 359 aaPredicted RBP9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 COX11Q9Y6N1 276 aa9.32□□□□□ -0.92
PRPF40A-202ENST00000410080 F8VVB4 439 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 F8VWA3 439 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 LY6HO94772 140 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 C2orf68Q2NKX9 166 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 NBASA2RRP1 2371 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 A0A0G2JNJ9 132 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 PSG1P11464 419 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 SSBP2P81877 361 aaPredicted RBP9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 MBNL3Q9NUK0 354 aaKnown RBP9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 Q9UFV3 132 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 LSM4Q9Y4Z0 139 aaKnown RBP9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 NUP210LQ5VU65 1888 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 NDUFS8O00217 210 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 PYYP10082 97 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 EFNA4P52798 201 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 CLPSL2Q6UWE3 100 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 TEX43Q6ZNM6 134 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 OR9G9P0C7N8 305 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 OVOL1O14753 267 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 PVRIGQ6DKI7 326 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 TMEM144Q7Z5S9 345 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 IGHV3-16A0A0C4DH30 117 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 IZUMO1RA6ND01 250 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 APOC4P55056 127 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 LCN12Q6JVE5 192 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 DERL1Q9BUN8 251 aa9.31□□□□□ -0.92
PRPF40A-202ENST00000410080 LINC00587B1AMM8 73 aa9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 IGKCP01834 107 aa9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 ATXN8Q156A1 80 aa9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 Q6AWC8 147 aa9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 MSRB2Q9Y3D2 182 aa9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 A0A096LPF7 62 aa9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 IGKV1D-43A0A0B4J1Z2 117 aa9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 UCP1P25874 307 aa9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 PRCDQ00LT1 54 aa9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 GAGE2EQ4V326 116 aa9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 EXOC3-AS1Q8N2X6 119 aa9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 ZNF837Q96EG3 531 aaPredicted RBP9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 MRPS18AQ9NVS2 196 aaKnown RBP9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 GAGE2DQ9UEU5 116 aa9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 HLA-DQB1P01920 261 aa9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 ATP5IP56385 69 aaPredicted RBP9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 TMEM200BQ69YZ2 307 aa9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 DANCRP0C864 163 aa9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 RUSC1-AS1Q66K80 236 aa9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 ZNF250P15622 560 aa9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 ORMDL2Q53FV1 153 aa9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 SYNJ2BPP57105 145 aa9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 PUSL1Q8N0Z8 303 aaKnown RBP9.3□□□□□ -0.92
PRPF40A-202ENST00000410080 NUP210Q8TEM1 1887 aaPredicted RBP9.29□□□□□ -0.92
PRPF40A-202ENST00000410080 CLPSL1A2RUU4 121 aa9.29□□□□□ -0.92
PRPF40A-202ENST00000410080 PMS2P5A8MQ11 134 aa9.29□□□□□ -0.92
PRPF40A-202ENST00000410080 FOXL1Q12952 345 aa9.29□□□□□ -0.92
PRPF40A-202ENST00000410080 MDS2Q8NDY4 140 aa9.29□□□□□ -0.92
PRPF40A-202ENST00000410080 EXPH5Q8NEV8 1989 aa9.29□□□□□ -0.92
PRPF40A-202ENST00000410080 TNFSF13O75888 250 aa9.29□□□□□ -0.92
PRPF40A-202ENST00000410080 GGACTQ9BVM4 153 aa9.29□□□□□ -0.92
PRPF40A-202ENST00000410080 TGFBR3LH3BV60 316 aa9.29□□□□□ -0.92
PRPF40A-202ENST00000410080 A0A087WWL8 130 aa9.29□□□□□ -0.92
PRPF40A-202ENST00000410080 BPESC1Q9GZL8 116 aa9.29□□□□□ -0.92
PRPF40A-202ENST00000410080 GSN-AS1Q9NRJ2 163 aa9.29□□□□□ -0.92
PRPF40A-202ENST00000410080 F2Z2F3 143 aa9.29□□□□□ -0.92
PRPF40A-202ENST00000410080 BMPERQ8N8U9 685 aa9.29□□□□□ -0.92
PRPF40A-202ENST00000410080 ESDP10768 282 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 C1QTNF5Q9BXJ0 243 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 ERG28Q9UKR5 140 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 hADV29S1A0JD25 119 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 CD5LO43866 347 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 TCRAP04437 139 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 FAM90A1Q86YD7 464 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 TMEM256Q8N2U0 113 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 RCC1LQ96I51 464 aaKnown RBP9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 H3BMM0 161 aa9.28□□□□□ -0.92
PRPF40A-202ENST00000410080 UBE2WQ96B02 151 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms