RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 TIMM17BO60830 172 aa0.01□□□□□ -2.41
PMS1-203ENST00000409593 HAND1O96004 215 aa0.01□□□□□ -2.41
PMS1-203ENST00000409593 C8GP07360 202 aa0.01□□□□□ -2.41
PMS1-203ENST00000409593 PPIBP23284 216 aaKnown RBP0.01□□□□□ -2.41
PMS1-203ENST00000409593 SERPINB9P50453 376 aa0.01□□□□□ -2.41
PMS1-203ENST00000409593 AESQ08117 197 aa0.01□□□□□ -2.41
PMS1-203ENST00000409593 ST6GALNAC3Q8NDV1 305 aa0.01□□□□□ -2.41
PMS1-203ENST00000409593 PLPP5Q8NEB5 264 aa0.01□□□□□ -2.41
PMS1-203ENST00000409593 SLC30A7Q8NEW0 376 aa0.01□□□□□ -2.41
PMS1-203ENST00000409593 OR51A2Q8NGJ7 313 aa0.01□□□□□ -2.41
PMS1-203ENST00000409593 BORCS7Q96B45 105 aa0.01□□□□□ -2.41
PMS1-203ENST00000409593 PRRT1Q99946 306 aa0.01□□□□□ -2.41
PMS1-203ENST00000409593 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.01□□□□□ -2.41
PMS1-203ENST00000409593 FBXO5Q9UKT4 447 aa0.01□□□□□ -2.41
PMS1-203ENST00000409593 NCOA1Q15788 1441 aa0.01□□□□□ -2.41
PMS1-203ENST00000409593 ARHGEF11O15085 1522 aa0.01□□□□□ -2.41
PMS1-203ENST00000409593 MUC4Q99102 2169 aa0□□□□□ -2.41
PMS1-203ENST00000409593 PCLOQ9Y6V0 5065 aa0□□□□□ -2.41
PMS1-203ENST00000409593 TRAV4A0A0B4J268 109 aa0□□□□□ -2.41
PMS1-203ENST00000409593 CD2P06729 351 aa0□□□□□ -2.41
PMS1-203ENST00000409593 CYBAP13498 195 aa0□□□□□ -2.41
PMS1-203ENST00000409593 OMPP47874 163 aa0□□□□□ -2.41
PMS1-203ENST00000409593 TNS3Q68CZ2 1445 aa0□□□□□ -2.41
PMS1-203ENST00000409593 PTRHD1Q6GMV3 140 aaKnown RBP0□□□□□ -2.41
PMS1-203ENST00000409593 PLB1Q6P1J6 1458 aa0□□□□□ -2.41
PMS1-203ENST00000409593 LINC00575Q6W349 94 aa0□□□□□ -2.41
PMS1-203ENST00000409593 TRAPPC5Q8IUR0 188 aa0□□□□□ -2.41
PMS1-203ENST00000409593 OR6V1Q8N148 313 aa0□□□□□ -2.41
PMS1-203ENST00000409593 OR2T35Q8NGX2 323 aa0□□□□□ -2.41
PMS1-203ENST00000409593 Q8TAT8 98 aa0□□□□□ -2.41
PMS1-203ENST00000409593 TMEM254Q8TBM7 123 aa0□□□□□ -2.41
PMS1-203ENST00000409593 CMSS1Q9BQ75 279 aaKnown RBP0□□□□□ -2.41
PMS1-203ENST00000409593 TVP23BQ9NYZ1 205 aa0□□□□□ -2.41
PMS1-203ENST00000409593 MYH7BA7E2Y1 1941 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 OBSL1O75147 1896 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 KCPQ6ZWJ8 1503 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 BDP1A6H8Y1 2624 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 PDE6DO43924 150 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 SPINK7P58062 85 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 RHOBP62745 196 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 EDDM3AQ14507 147 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 TMEM97Q5BJF2 176 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 GLIPR1L1Q6UWM5 242 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 PDZD9Q8IXQ8 264 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 OR10K1Q8NGX5 313 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 ZC2HC1AQ96GY0 325 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 PRAP1Q96NZ9 151 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 GPER1Q99527 375 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 GLTPQ9NZD2 209 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 ORMDL1Q9P0S3 153 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 PCTPQ9UKL6 214 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 SCN8AQ9UQD0 1980 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 RFX7Q2KHR2 1363 aa-0.01□□□□□ -2.41
PMS1-203ENST00000409593 E7EUB6 86 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 IGLV1-51P01701 117 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 IGLV3-1P01715 115 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 ANP32AP39687 249 aaKnown RBP-0.02□□□□□ -2.41
PMS1-203ENST00000409593 PIGPP57054 158 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 AP3S2P59780 193 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 MYL6P60660 151 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 HIST1H3AP68431 136 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 H3F3AP84243 136 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 RRN3P1Q2M238 152 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 C1orf134Q5TEV5 83 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 C22orf39Q6P5X5 142 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 HAGHLQ6PII5 290 aaPredicted RBP-0.02□□□□□ -2.41
PMS1-203ENST00000409593 TSKUQ8WUA8 353 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 FAM172AQ8WUF8 416 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 ARL5BQ96KC2 179 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 FAM103A1Q9BTL3 118 aaKnown RBP-0.02□□□□□ -2.41
PMS1-203ENST00000409593 MYO18AQ92614 2054 aaKnown RBP-0.02□□□□□ -2.41
PMS1-203ENST00000409593 ZDBF2Q9HCK1 2354 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 RTL1A6NKG5 1358 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 SIP14410 1827 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 LRP1Q07954 4544 aaKnown RBP-0.02□□□□□ -2.41
PMS1-203ENST00000409593 TRAV10A0A0B4J240 114 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 NDUFB3O43676 98 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 RPP14O95059 124 aaKnown RBP-0.02□□□□□ -2.41
PMS1-203ENST00000409593 ATP5G3P48201 142 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 DSCR4P56555 118 aaPredicted RBP-0.02□□□□□ -2.41
PMS1-203ENST00000409593 EIF5AP63241 154 aaKnown RBP-0.02□□□□□ -2.41
PMS1-203ENST00000409593 ITGB3BPQ13352 177 aaPredicted RBP-0.02□□□□□ -2.41
PMS1-203ENST00000409593 PATE2Q6UY27 113 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 TP53RKQ96S44 253 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 LYSMD1Q96S90 227 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 GGACTQ9BVM4 153 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 TRIM4Q9C037 500 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 PARVBQ9HBI1 364 aa-0.02□□□□□ -2.41
PMS1-203ENST00000409593 CHD3Q12873 2000 aaKnown RBP-0.02□□□□□ -2.41
PMS1-203ENST00000409593 PCF11O94913 1555 aaKnown RBP-0.02□□□□□ -2.41
PMS1-203ENST00000409593 MYH10P35580 1976 aa-0.03□□□□□ -2.41
PMS1-203ENST00000409593 FAM159BA6NKW6 160 aa-0.03□□□□□ -2.41
PMS1-203ENST00000409593 A8MWV9 139 aa-0.03□□□□□ -2.41
PMS1-203ENST00000409593 TAX1BP3O14907 124 aa-0.03□□□□□ -2.41
PMS1-203ENST00000409593 FOXA3P55318 350 aaPredicted RBP-0.03□□□□□ -2.41
PMS1-203ENST00000409593 ERVS71-1P61550 626 aa-0.03□□□□□ -2.41
PMS1-203ENST00000409593 KRR1Q13601 381 aaKnown RBP-0.03□□□□□ -2.41
PMS1-203ENST00000409593 OTUD6BQ8N6M0 293 aa-0.03□□□□□ -2.41
PMS1-203ENST00000409593 OR5D14Q8NGL3 314 aa-0.03□□□□□ -2.41
PMS1-203ENST00000409593 LINC00467Q9BRT7 94 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms