RNA–Protein interactions for RNA: ENST00000406438.4

SMCR8-201, Transcript of Smith-Magenis syndrome chromosome region, candidate 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCR8, Length 8,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCR8-201ENST00000406438 ERCC8Q13216 396 aa9.99□□□□□ -0.81
SMCR8-201ENST00000406438 LY6DQ14210 128 aa9.99□□□□□ -0.81
SMCR8-201ENST00000406438 IGLV3-19P01714 112 aa9.99□□□□□ -0.81
SMCR8-201ENST00000406438 PPIFP30405 207 aaKnown RBP9.99□□□□□ -0.81
SMCR8-201ENST00000406438 SRSF7Q16629 238 aaKnown RBP eCLIP9.99□□□□□ -0.81
SMCR8-201ENST00000406438 LURAP1LQ8IV03 231 aa9.99□□□□□ -0.81
SMCR8-201ENST00000406438 EDA2RQ9HAV5 297 aa9.99□□□□□ -0.81
SMCR8-201ENST00000406438 LAMTOR2Q9Y2Q5 125 aa9.99□□□□□ -0.81
SMCR8-201ENST00000406438 ITGB1BP1O14713 200 aa9.99□□□□□ -0.81
SMCR8-201ENST00000406438 CEACAM8P31997 349 aaPredicted RBP9.99□□□□□ -0.81
SMCR8-201ENST00000406438 C1QTNF4Q9BXJ3 329 aa9.99□□□□□ -0.81
SMCR8-201ENST00000406438 SPSB3Q6PJ21 355 aa9.99□□□□□ -0.81
SMCR8-201ENST00000406438 IFI27L1Q96BM0 104 aa9.99□□□□□ -0.81
SMCR8-201ENST00000406438 LOC105371267A0A1B0GV96 52 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 LEPROTO15243 131 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 IGFBP3P17936 291 aaPredicted RBP9.98□□□□□ -0.81
SMCR8-201ENST00000406438 NPC2P61916 151 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 SAMD5Q5TGI4 173 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 TMEM170AQ8WVE7 144 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 ZNF837Q96EG3 531 aaPredicted RBP9.98□□□□□ -0.81
SMCR8-201ENST00000406438 GSN-AS1Q9NRJ2 163 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 TRGV1A0A0A0MS02 117 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 PYYP10082 97 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 DUTP33316 252 aaKnown RBP9.98□□□□□ -0.81
SMCR8-201ENST00000406438 TRAV9-2A0A087WT02 112 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 IGHV1-18A0A0C4DH31 117 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 FAM166AQ6J272 317 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 C20orf204Q6ZNR8 217 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 SIGMAR1Q99720 223 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 IGHV2-26A0A0B4J1V2 119 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 GTF3AQ92664 365 aaKnown RBP9.98□□□□□ -0.81
SMCR8-201ENST00000406438 SEC11AP67812 179 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 SPACA3Q8IXA5 215 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 TSKUQ8WUA8 353 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 MUC4Q99102 2169 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 RPL36AP83881 106 aaKnown RBP9.98□□□□□ -0.81
SMCR8-201ENST00000406438 TEX43Q6ZNM6 134 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 HAPLN4Q86UW8 402 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 TMEM219Q86XT9 240 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 RPL36ALQ969Q0 106 aaKnown RBP9.98□□□□□ -0.81
SMCR8-201ENST00000406438 SLC25A39Q9BZJ4 359 aaPredicted RBP9.98□□□□□ -0.81
SMCR8-201ENST00000406438 IGHV3-73A0A0B4J1V6 119 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 GAGE13Q4V321 117 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 TMEM155Q4W5P6 130 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 MINOS1Q5TGZ0 78 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 MINOS1-NBL1R4GNA1 71 aa9.98□□□□□ -0.81
SMCR8-201ENST00000406438 SMPXQ9UHP9 88 aa9.97□□□□□ -0.81
SMCR8-201ENST00000406438 PMS2P5A8MQ11 134 aa9.97□□□□□ -0.81
SMCR8-201ENST00000406438 TMEM249Q2WGJ8 235 aa9.97□□□□□ -0.81
SMCR8-201ENST00000406438 C3orf56Q8N813 242 aa9.97□□□□□ -0.81
SMCR8-201ENST00000406438 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.97□□□□□ -0.81
SMCR8-201ENST00000406438 SUMO4Q6EEV6 95 aa9.97□□□□□ -0.81
SMCR8-201ENST00000406438 IGKV2-40A0A087WW87 121 aaPredicted RBP9.97□□□□□ -0.81
SMCR8-201ENST00000406438 IGKV2D-40P01614 121 aaPredicted RBP9.97□□□□□ -0.81
SMCR8-201ENST00000406438 RPL15P61313 204 aaKnown RBP9.97□□□□□ -0.81
SMCR8-201ENST00000406438 OR10W1Q8NGF6 305 aa9.97□□□□□ -0.81
SMCR8-201ENST00000406438 PLPPR1Q8TBJ4 325 aa9.97□□□□□ -0.81
SMCR8-201ENST00000406438 COL4A5P29400 1685 aa9.97□□□□□ -0.81
SMCR8-201ENST00000406438 DNAJC30Q96LL9 226 aa9.97□□□□□ -0.81
SMCR8-201ENST00000406438 MGST2Q99735 147 aa9.97□□□□□ -0.81
SMCR8-201ENST00000406438 DEPPQ9NTK1 212 aa9.97□□□□□ -0.81
SMCR8-201ENST00000406438 ZFAND6Q6FIF0 208 aa9.97□□□□□ -0.81
SMCR8-201ENST00000406438 TEX38Q6PEX7 206 aa9.96□□□□□ -0.81
SMCR8-201ENST00000406438 ZCCHC24Q8N2G6 241 aaKnown RBP9.96□□□□□ -0.81
SMCR8-201ENST00000406438 RNF114Q9Y508 228 aa9.96□□□□□ -0.81
SMCR8-201ENST00000406438 CCL1P22362 96 aa9.96□□□□□ -0.81
SMCR8-201ENST00000406438 ACTL10Q5JWF8 245 aa9.96□□□□□ -0.81
SMCR8-201ENST00000406438 USMG5Q96IX5 58 aa9.96□□□□□ -0.81
SMCR8-201ENST00000406438 KLF12Q9Y4X4 402 aa9.96□□□□□ -0.81
SMCR8-201ENST00000406438 A8MXK9 166 aa9.96□□□□□ -0.82
SMCR8-201ENST00000406438 ZXDCQ2QGD7 858 aaPredicted RBP9.96□□□□□ -0.82
SMCR8-201ENST00000406438 LINC00114Q6XXX2 140 aa9.96□□□□□ -0.82
SMCR8-201ENST00000406438 KLHL30-AS1Q8NEE0 82 aa9.96□□□□□ -0.82
SMCR8-201ENST00000406438 SRRM4A7MD48 611 aaKnown RBP9.96□□□□□ -0.82
SMCR8-201ENST00000406438 FOXL1Q12952 345 aa9.96□□□□□ -0.82
SMCR8-201ENST00000406438 RASL11AQ6T310 242 aa9.96□□□□□ -0.82
SMCR8-201ENST00000406438 C6orf226Q5I0X4 101 aa9.96□□□□□ -0.82
SMCR8-201ENST00000406438 SS18Q15532 418 aa9.96□□□□□ -0.82
SMCR8-201ENST00000406438 SLC25A48Q6ZT89 311 aaKnown RBP9.96□□□□□ -0.82
SMCR8-201ENST00000406438 HSD52Q0P140 79 aa9.95□□□□□ -0.82
SMCR8-201ENST00000406438 LINC00477Q96M19 166 aa9.95□□□□□ -0.82
SMCR8-201ENST00000406438 TMEM200BQ69YZ2 307 aa9.95□□□□□ -0.82
SMCR8-201ENST00000406438 PLEKHB2Q96CS7 222 aa9.95□□□□□ -0.82
SMCR8-201ENST00000406438 IGKV1D-13A0A0B4J2D9 117 aa9.95□□□□□ -0.82
SMCR8-201ENST00000406438 VWC2LB2RUY7 222 aa9.95□□□□□ -0.82
SMCR8-201ENST00000406438 IGKV1-13P0DP09 117 aa9.95□□□□□ -0.82
SMCR8-201ENST00000406438 GZMBP10144 247 aa9.95□□□□□ -0.82
SMCR8-201ENST00000406438 CD300EQ496F6 205 aaPredicted RBP9.95□□□□□ -0.82
SMCR8-201ENST00000406438 ZNF48Q96MX3 618 aaPredicted RBP9.95□□□□□ -0.82
SMCR8-201ENST00000406438 CITED2Q99967 270 aaPredicted RBP9.95□□□□□ -0.82
SMCR8-201ENST00000406438 OTOGLQ3ZCN5 2332 aa9.95□□□□□ -0.82
SMCR8-201ENST00000406438 LYNX1G3V0Z9 82 aa9.95□□□□□ -0.82
SMCR8-201ENST00000406438 LYNX1P0DP58 116 aa9.95□□□□□ -0.82
SMCR8-201ENST00000406438 GAGE2EQ4V326 116 aa9.95□□□□□ -0.82
SMCR8-201ENST00000406438 GAGE2DQ9UEU5 116 aa9.95□□□□□ -0.82
SMCR8-201ENST00000406438 C1QTNF9P0C862 333 aa9.95□□□□□ -0.82
SMCR8-201ENST00000406438 RNF126Q9BV68 326 aa9.95□□□□□ -0.82
SMCR8-201ENST00000406438 IGLV3-12A0A075B6K2 115 aa9.95□□□□□ -0.82
SMCR8-201ENST00000406438 IL18BPO95998 194 aa9.95□□□□□ -0.82
SMCR8-201ENST00000406438 ZNF138P52744 262 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 217.2 ms