RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 CCSO14618 274 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 DEFB4AO15263 64 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 LYRM1O43325 122 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 BUB3O43684 328 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 SSSCA1O60232 199 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 SCGB1D2O95969 90 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 CA1P00915 261 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 GATA2P23769 480 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 NKX2-1P43699 371 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 EIF2B2P49770 351 aaKnown RBP4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 DEFB1P60022 68 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 RAB11AP62491 216 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 SRSF3P84103 164 aaKnown RBP4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 PSMG4Q5JS54 123 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 ACTL10Q5JWF8 245 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 OR8G2PQ6IF36 304 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 SIGLEC15Q6ZMC9 328 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 ACOT7LQ6ZUV0 252 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 STHQ8IWL8 128 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 THAP8Q8NA92 274 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 OR4D5Q8NGN0 318 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 COQ8AQ8NI60 647 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 IL17DQ8TAD2 202 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 CIB3Q96Q77 187 aaPredicted RBP4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 C7orf50Q9BRJ6 194 aaKnown RBP4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 SEC22CQ9BRL7 303 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 C20orf85Q9H1P6 137 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 GSKIPQ9P0R6 139 aa4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 STRAPQ9Y3F4 350 aaKnown RBP4.22□□□□□ -1.73
HMGB1P20-201ENST00000402555 SMCO3A2RU48 225 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 CXorf65A6NEN9 183 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 HELTA6NFD8 242 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 IFNA21P01568 189 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 TCRBP04435 133 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 GIG44P09565 113 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 C4BPBP20851 252 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 PAX9P55771 341 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 ATP5IP56385 69 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 RRAS2P62070 204 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 AKR1C1Q04828 323 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 IAH1Q2TAA2 248 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 CNPY1Q3B7I2 92 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 TMEM182Q6ZP80 229 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 TRPT1Q86TN4 253 aaKnown RBP4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 ZBTB8BQ8NAP8 495 aaPredicted RBP4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 OR11H2Q8NH07 326 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 MITD1Q8WV92 249 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 PPP1R14BQ96C90 147 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 ANAPC16Q96DE5 110 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 RAB40CQ96S21 281 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 TRGV9Q99603 122 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 RARRES2Q99969 163 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 WDR12Q9GZL7 423 aaKnown RBP4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 NRN1Q9NPD7 142 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 CLEC5AQ9NY25 188 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 PSENENQ9NZ42 101 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 TBC1D24Q9ULP9 559 aa4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 RCL1Q9Y2P8 373 aaKnown RBP4.21□□□□□ -1.74
HMGB1P20-201ENST00000402555 PMS2P5A8MQ11 134 aa4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 SNRPGP15A8MWD9 76 aa4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 FAM25EA8MYX2 175 aa4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 IGKV3-20P01619 116 aa4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 MBPP02686 304 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 FABP1P07148 127 aa4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 METTL15P1P0C7V9 234 aa4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 ATF4P18848 351 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 ORM2P19652 201 aa4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 AP2S1P53680 142 aaPredicted RBP4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 NANOS2P60321 138 aaKnown RBP4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 RPP30P78346 268 aaKnown RBP4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 ARL16Q0P5N6 197 aa4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 GDF5OSQ5U4N7 250 aa4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 GATAD1Q8WUU5 269 aa4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 LINC00052Q96N35 136 aa4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 CCDC32Q9BV29 185 aa4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 SLC25A22Q9H936 323 aa4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 NUDT15Q9NV35 164 aa4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 DOK5Q9P104 306 aa4.2□□□□□ -1.74
HMGB1P20-201ENST00000402555 HYDINQ4G0P3 5121 aa4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 IGHV4-28A0A0C4DH34 117 aa4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 C5orf51A6NDU8 294 aa4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 F6UB75 175 aa4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 SOCS3O14543 225 aa4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 PRB4P10163 310 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 NUP62P37198 522 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 FXYD7P58549 80 aa4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 SNRPD3P62318 126 aaKnown RBP4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 ZNF846Q147U1 533 aa4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 IGFL4Q6B9Z1 124 aa4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 TMEM14EPQ6UXP3 125 aa4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 CYP2G1PQ6ZSU1 146 aa4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 TMEM144Q7Z5S9 345 aa4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 OR8I2Q8N0Y5 310 aa4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 C12orf45Q8N5I9 185 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 BPIFCQ8NFQ6 507 aa4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 OR1B1Q8NGR6 318 aa4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 ZNF431Q8TF32 576 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 SMIM8Q96KF7 97 aa4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 C17orf77Q96MU5 243 aa4.19□□□□□ -1.74
HMGB1P20-201ENST00000402555 SCRT1Q9BWW7 348 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms