RNA–Protein interactions for RNA: ENST00000401669.6

NRXN1-204, Transcript of neurexin 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene NRXN1, Length 5,870 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-204ENST00000401669 GAGE2EQ4V326 116 aa13.19□□□□□ -0.3
NRXN1-204ENST00000401669 C1QL4Q86Z23 238 aa13.19□□□□□ -0.3
NRXN1-204ENST00000401669 LINC00518Q8N0U6 118 aa13.19□□□□□ -0.3
NRXN1-204ENST00000401669 GAGE2DQ9UEU5 116 aa13.19□□□□□ -0.3
NRXN1-204ENST00000401669 ARHGEF17Q96PE2 2063 aaPredicted RBP13.19□□□□□ -0.3
NRXN1-204ENST00000401669 ANKRD31Q8N7Z5 1873 aa13.19□□□□□ -0.3
NRXN1-204ENST00000401669 TAF1LQ8IZX4 1826 aa13.19□□□□□ -0.3
NRXN1-204ENST00000401669 D6R8Y8 96 aa13.19□□□□□ -0.3
NRXN1-204ENST00000401669 DEFB131AP59861 70 aa13.19□□□□□ -0.3
NRXN1-204ENST00000401669 LYZL1Q6UWQ5 148 aa13.19□□□□□ -0.3
NRXN1-204ENST00000401669 MYO16Q9Y6X6 1858 aa13.19□□□□□ -0.3
NRXN1-204ENST00000401669 Q5PR19 223 aa13.19□□□□□ -0.3
NRXN1-204ENST00000401669 PRIMA1Q86XR5 153 aa13.19□□□□□ -0.3
NRXN1-204ENST00000401669 GNB1LQ9BYB4 327 aa13.19□□□□□ -0.3
NRXN1-204ENST00000401669 CSTL1Q9H114 145 aa13.19□□□□□ -0.3
NRXN1-204ENST00000401669 SPTBN1Q01082 2364 aaKnown RBP13.19□□□□□ -0.3
NRXN1-204ENST00000401669 SLC25A48Q6ZT89 311 aaKnown RBP13.18□□□□□ -0.3
NRXN1-204ENST00000401669 FAM110DQ8TAY7 271 aaPredicted RBP13.18□□□□□ -0.3
NRXN1-204ENST00000401669 FOXG1P55316 489 aaPredicted RBP13.18□□□□□ -0.3
NRXN1-204ENST00000401669 SUMO4Q6EEV6 95 aa13.18□□□□□ -0.3
NRXN1-204ENST00000401669 C14orf178Q8N769 122 aaPredicted RBP13.18□□□□□ -0.3
NRXN1-204ENST00000401669 ARFGEF1Q9Y6D6 1849 aa13.18□□□□□ -0.3
NRXN1-204ENST00000401669 CACNA1IQ9P0X4 2223 aa13.18□□□□□ -0.3
NRXN1-204ENST00000401669 A8MXK9 166 aa13.18□□□□□ -0.3
NRXN1-204ENST00000401669 DLX4Q92988 240 aaPredicted RBP13.18□□□□□ -0.3
NRXN1-204ENST00000401669 SCN2AQ99250 2005 aa13.18□□□□□ -0.3
NRXN1-204ENST00000401669 DNAJC30Q96LL9 226 aa13.18□□□□□ -0.3
NRXN1-204ENST00000401669 MYMXA0A1B0GTQ4 84 aa13.18□□□□□ -0.3
NRXN1-204ENST00000401669 RNF222A6NCQ9 220 aa13.18□□□□□ -0.3
NRXN1-204ENST00000401669 TREML4Q6UXN2 200 aa13.18□□□□□ -0.3
NRXN1-204ENST00000401669 Q8TAT8 98 aa13.18□□□□□ -0.3
NRXN1-204ENST00000401669 BUB1B-PAK6H3BSN5 160 aa13.17□□□□□ -0.3
NRXN1-204ENST00000401669 LINC01559Q495D7 138 aa13.17□□□□□ -0.3
NRXN1-204ENST00000401669 LCN12Q6JVE5 192 aa13.17□□□□□ -0.3
NRXN1-204ENST00000401669 OVOL3O00110 214 aa13.17□□□□□ -0.3
NRXN1-204ENST00000401669 SNHG12Q9BXW3 62 aa13.17□□□□□ -0.3
NRXN1-204ENST00000401669 NR2C2APQ86WQ0 139 aa13.17□□□□□ -0.3
NRXN1-204ENST00000401669 TRGV9Q99603 122 aa13.17□□□□□ -0.3
NRXN1-204ENST00000401669 OVOL2Q9BRP0 275 aa13.17□□□□□ -0.3
NRXN1-204ENST00000401669 GAGE13Q4V321 117 aa13.17□□□□□ -0.3
NRXN1-204ENST00000401669 NKAPP1Q8N9T2 125 aa13.17□□□□□ -0.3
NRXN1-204ENST00000401669 MSRB2Q9Y3D2 182 aa13.17□□□□□ -0.3
NRXN1-204ENST00000401669 A0A087WWL8 130 aa13.16□□□□□ -0.3
NRXN1-204ENST00000401669 ESDP10768 282 aa13.16□□□□□ -0.3
NRXN1-204ENST00000401669 SSBP2P81877 361 aaPredicted RBP13.16□□□□□ -0.3
NRXN1-204ENST00000401669 HSD52Q0P140 79 aa13.16□□□□□ -0.3
NRXN1-204ENST00000401669 IGFL4Q6B9Z1 124 aa13.16□□□□□ -0.3
NRXN1-204ENST00000401669 DAZ1Q9NQZ3 744 aaKnown RBP13.16□□□□□ -0.3
NRXN1-204ENST00000401669 BMPERQ8N8U9 685 aa13.16□□□□□ -0.3
NRXN1-204ENST00000401669 SH2D1AO60880 128 aa13.16□□□□□ -0.3
NRXN1-204ENST00000401669 LY6HO94772 140 aa13.16□□□□□ -0.3
NRXN1-204ENST00000401669 SAA4P35542 130 aa13.16□□□□□ -0.3
NRXN1-204ENST00000401669 CFHR3Q02985 330 aa13.16□□□□□ -0.3
NRXN1-204ENST00000401669 Q71RC1 249 aaPredicted RBP13.16□□□□□ -0.3
NRXN1-204ENST00000401669 ZNF114Q8NC26 417 aa13.16□□□□□ -0.3
NRXN1-204ENST00000401669 MAPK1IP1LQ8NDC0 245 aa13.16□□□□□ -0.3
NRXN1-204ENST00000401669 SAMD5Q5TGI4 173 aa13.16□□□□□ -0.3
NRXN1-204ENST00000401669 ATAD5Q96QE3 1844 aa13.16□□□□□ -0.3
NRXN1-204ENST00000401669 PRTN3P24158 256 aa13.16□□□□□ -0.3
NRXN1-204ENST00000401669 ID3Q02535 119 aa13.16□□□□□ -0.3
NRXN1-204ENST00000401669 TMEM190Q8WZ59 177 aa13.16□□□□□ -0.3
NRXN1-204ENST00000401669 XCL2Q9UBD3 114 aa13.16□□□□□ -0.3
NRXN1-204ENST00000401669 PIKFYVEQ9Y2I7 2098 aa13.15□□□□□ -0.3
NRXN1-204ENST00000401669 COL8A2P25067 703 aa13.15□□□□□ -0.3
NRXN1-204ENST00000401669 GGTLC1Q9BX51 225 aa13.15□□□□□ -0.3
NRXN1-204ENST00000401669 CD177Q8N6Q3 437 aa13.15□□□□□ -0.3
NRXN1-204ENST00000401669 Q96MF0 132 aa13.15□□□□□ -0.3
NRXN1-204ENST00000401669 NRXN2Q9P2S2 1712 aa13.15□□□□□ -0.3
NRXN1-204ENST00000401669 SPATA31B1PQ5VZV4 182 aa13.15□□□□□ -0.3
NRXN1-204ENST00000401669 PAQR4Q8N4S7 273 aaPredicted RBP13.15□□□□□ -0.3
NRXN1-204ENST00000401669 KIF13BQ9NQT8 1826 aa13.15□□□□□ -0.3
NRXN1-204ENST00000401669 NDUFS8O00217 210 aa13.15□□□□□ -0.31
NRXN1-204ENST00000401669 CITED2Q99967 270 aaPredicted RBP13.15□□□□□ -0.31
NRXN1-204ENST00000401669 ZNF319Q9P2F9 582 aa13.15□□□□□ -0.31
NRXN1-204ENST00000401669 MSMBP08118 114 aa13.14□□□□□ -0.31
NRXN1-204ENST00000401669 RBMY1FQ15415 496 aaKnown RBP13.14□□□□□ -0.31
NRXN1-204ENST00000401669 RFNGQ9Y644 331 aa13.14□□□□□ -0.31
NRXN1-204ENST00000401669 SBF2Q86WG5 1849 aa13.14□□□□□ -0.31
NRXN1-204ENST00000401669 H0YJW9 148 aa13.14□□□□□ -0.31
NRXN1-204ENST00000401669 TBX6O95947 436 aaPredicted RBP13.14□□□□□ -0.31
NRXN1-204ENST00000401669 C2orf82Q6UX34 121 aa13.14□□□□□ -0.31
NRXN1-204ENST00000401669 MESP1Q9BRJ9 268 aa13.14□□□□□ -0.31
NRXN1-204ENST00000401669 F8VVB4 439 aa13.14□□□□□ -0.31
NRXN1-204ENST00000401669 F8VWA3 439 aa13.14□□□□□ -0.31
NRXN1-204ENST00000401669 RNF126Q9BV68 326 aa13.14□□□□□ -0.31
NRXN1-204ENST00000401669 TIMM21Q9BVV7 248 aa13.14□□□□□ -0.31
NRXN1-204ENST00000401669 LY6G5BQ8NDX9 201 aa13.14□□□□□ -0.31
NRXN1-204ENST00000401669 SPXQ9BT56 116 aa13.14□□□□□ -0.31
NRXN1-204ENST00000401669 RALGAPA1Q6GYQ0 2036 aa13.14□□□□□ -0.31
NRXN1-204ENST00000401669 CRYGSP22914 178 aa13.13□□□□□ -0.31
NRXN1-204ENST00000401669 PRR31Q5SQ13 230 aa13.13□□□□□ -0.31
NRXN1-204ENST00000401669 GGNQ86UU5 652 aa13.13□□□□□ -0.31
NRXN1-204ENST00000401669 VSIRQ9H7M9 311 aa13.13□□□□□ -0.31
NRXN1-204ENST00000401669 ABCA7Q8IZY2 2146 aa13.13□□□□□ -0.31
NRXN1-204ENST00000401669 CEP250Q9BV73 2442 aa13.13□□□□□ -0.31
NRXN1-204ENST00000401669 ABCA1O95477 2261 aa13.13□□□□□ -0.31
NRXN1-204ENST00000401669 GAGE12JA6NER3 117 aa13.13□□□□□ -0.31
NRXN1-204ENST00000401669 GAGE1Q13065 139 aa13.13□□□□□ -0.31
NRXN1-204ENST00000401669 GAGE4Q13068 117 aa13.13□□□□□ -0.31
NRXN1-204ENST00000401669 GAGE5Q13069 117 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms