RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 OR5AN1Q8NGI8 311 aa14.87□□□□□ -0.03
COL18A1-204ENST00000400337 E7EQL1 145 aa14.86□□□□□ -0.03
COL18A1-204ENST00000400337 PSMG4Q5JS54 123 aa14.86□□□□□ -0.03
COL18A1-204ENST00000400337 TOMM7Q9P0U1 55 aa14.86□□□□□ -0.03
COL18A1-204ENST00000400337 SIGLEC9Q9Y336 463 aa14.86□□□□□ -0.03
COL18A1-204ENST00000400337 GFI1BQ5VTD9 330 aa14.86□□□□□ -0.03
COL18A1-204ENST00000400337 TRGV9Q99603 122 aa14.86□□□□□ -0.03
COL18A1-204ENST00000400337 CADP27708 2225 aa14.86□□□□□ -0.03
COL18A1-204ENST00000400337 LINC00587B1AMM8 73 aa14.86□□□□□ -0.03
COL18A1-204ENST00000400337 M0R1W7 72 aa14.86□□□□□ -0.03
COL18A1-204ENST00000400337 ABCA4P78363 2273 aa14.86□□□□□ -0.03
COL18A1-204ENST00000400337 C15orf62A8K5M9 175 aa14.86□□□□□ -0.03
COL18A1-204ENST00000400337 B4DSR2 109 aa14.85□□□□□ -0.03
COL18A1-204ENST00000400337 IGKV1-16P04430 117 aa14.85□□□□□ -0.03
COL18A1-204ENST00000400337 EVI2AP22794 236 aa14.85□□□□□ -0.03
COL18A1-204ENST00000400337 JKAMPQ9P055 326 aa14.85□□□□□ -0.03
COL18A1-204ENST00000400337 TMEM242Q9NWH2 141 aa14.85□□□□□ -0.03
COL18A1-204ENST00000400337 LINC01551Q86U37 167 aa14.85□□□□□ -0.03
COL18A1-204ENST00000400337 DPH3Q96FX2 82 aa14.85□□□□□ -0.03
COL18A1-204ENST00000400337 CRIM1Q9NZV1 1036 aa14.85□□□□□ -0.03
COL18A1-204ENST00000400337 PTPRDP23468 1912 aa14.85□□□□□ -0.03
COL18A1-204ENST00000400337 OVOL1O14753 267 aa14.85□□□□□ -0.03
COL18A1-204ENST00000400337 DNAL4O96015 105 aa14.85□□□□□ -0.03
COL18A1-204ENST00000400337 TRBV24-1A0A075B6N3 115 aa14.84□□□□□ -0.03
COL18A1-204ENST00000400337 HBDP02042 147 aa14.84□□□□□ -0.03
COL18A1-204ENST00000400337 MSRB2Q9Y3D2 182 aa14.84□□□□□ -0.03
COL18A1-204ENST00000400337 MGAMO43451 1857 aa14.84□□□□□ -0.03
COL18A1-204ENST00000400337 IGKV1-6A0A0C4DH72 117 aa14.84□□□□□ -0.03
COL18A1-204ENST00000400337 COLCA2A8K830 154 aa14.84□□□□□ -0.03
COL18A1-204ENST00000400337 H3BRM9 83 aa14.84□□□□□ -0.03
COL18A1-204ENST00000400337 JMJD8Q96S16 334 aa14.84□□□□□ -0.03
COL18A1-204ENST00000400337 WNK2Q9Y3S1 2297 aa14.84□□□□□ -0.03
COL18A1-204ENST00000400337 A0A1B0GW64 132 aa14.84□□□□□ -0.03
COL18A1-204ENST00000400337 SRSF4Q08170 494 aaKnown RBP14.83□□□□□ -0.03
COL18A1-204ENST00000400337 PPBPP02775 128 aa14.83□□□□□ -0.04
COL18A1-204ENST00000400337 MLANAQ16655 118 aa14.83□□□□□ -0.04
COL18A1-204ENST00000400337 PRR31Q5SQ13 230 aa14.83□□□□□ -0.04
COL18A1-204ENST00000400337 BPESC1Q9GZL8 116 aa14.83□□□□□ -0.04
COL18A1-204ENST00000400337 UBE2CO00762 179 aa14.83□□□□□ -0.04
COL18A1-204ENST00000400337 TCRAP04437 139 aa14.83□□□□□ -0.04
COL18A1-204ENST00000400337 CACNG7P62955 275 aa14.83□□□□□ -0.04
COL18A1-204ENST00000400337 SRSF1Q07955 248 aaKnown RBP eCLIP14.83□□□□□ -0.042e-8■■■□□ 17.8
COL18A1-204ENST00000400337 REG4Q9BYZ8 158 aa14.83□□□□□ -0.04
COL18A1-204ENST00000400337 ZNRD1Q9P1U0 126 aa14.83□□□□□ -0.04
COL18A1-204ENST00000400337 NIT1Q86X76 327 aa14.83□□□□□ -0.04
COL18A1-204ENST00000400337 GLRX5Q86SX6 157 aa14.83□□□□□ -0.04
COL18A1-204ENST00000400337 NXT2Q9NPJ8 142 aaKnown RBP14.83□□□□□ -0.04
COL18A1-204ENST00000400337 LAMTOR2Q9Y2Q5 125 aa14.83□□□□□ -0.04
COL18A1-204ENST00000400337 APOMO95445 188 aa14.82□□□□□ -0.04
COL18A1-204ENST00000400337 NDPQ00604 133 aa14.82□□□□□ -0.04
COL18A1-204ENST00000400337 DMRTA1Q5VZB9 504 aa14.82□□□□□ -0.04
COL18A1-204ENST00000400337 VCX2Q9H322 139 aa14.82□□□□□ -0.04
COL18A1-204ENST00000400337 CFPP27918 469 aa14.82□□□□□ -0.04
COL18A1-204ENST00000400337 NSUN5P1Q3KNT7 163 aa14.82□□□□□ -0.04
COL18A1-204ENST00000400337 TICRRQ7Z2Z1 1910 aa14.82□□□□□ -0.04
COL18A1-204ENST00000400337 F2Z2F3 143 aa14.82□□□□□ -0.04
COL18A1-204ENST00000400337 IFI27P40305 119 aaPredicted RBP14.82□□□□□ -0.04
COL18A1-204ENST00000400337 CYB5R2Q6BCY4 276 aa14.82□□□□□ -0.04
COL18A1-204ENST00000400337 WDR81Q562E7 1941 aa14.81□□□□□ -0.04
COL18A1-204ENST00000400337 TSC2P49815 1807 aa14.81□□□□□ -0.04
COL18A1-204ENST00000400337 IGKV3D-20A0A0C4DH25 116 aa14.81□□□□□ -0.04
COL18A1-204ENST00000400337 ATP5L2Q7Z4Y8 100 aa14.81□□□□□ -0.04
COL18A1-204ENST00000400337 HIST1H2BLQ99880 126 aa14.81□□□□□ -0.04
COL18A1-204ENST00000400337 K7ENP7 123 aa14.81□□□□□ -0.04
COL18A1-204ENST00000400337 DOCK7Q96N67 2140 aa14.81□□□□□ -0.04
COL18A1-204ENST00000400337 RNASE2P10153 161 aaKnown RBP14.81□□□□□ -0.04
COL18A1-204ENST00000400337 LYL1P12980 280 aa14.81□□□□□ -0.04
COL18A1-204ENST00000400337 NDUFAF3Q9BU61 184 aa14.81□□□□□ -0.04
COL18A1-204ENST00000400337 FOXL1Q12952 345 aa14.8□□□□□ -0.04
COL18A1-204ENST00000400337 TTC32Q5I0X7 151 aa14.8□□□□□ -0.04
COL18A1-204ENST00000400337 SPSB3Q6PJ21 355 aa14.8□□□□□ -0.04
COL18A1-204ENST00000400337 NLRC5Q86WI3 1866 aa14.8□□□□□ -0.04
COL18A1-204ENST00000400337 CYSLTR1Q9Y271 337 aa14.8□□□□□ -0.04
COL18A1-204ENST00000400337 SPCS1Q9Y6A9 102 aa14.8□□□□□ -0.04
COL18A1-204ENST00000400337 A0A1B0GWB2 263 aa14.8□□□□□ -0.04
COL18A1-204ENST00000400337 TRAV9-2A0A087WT02 112 aa14.79□□□□□ -0.04
COL18A1-204ENST00000400337 C3orf36Q3SXR2 165 aa14.79□□□□□ -0.04
COL18A1-204ENST00000400337 TRGV11A0A075B6L2 103 aa14.79□□□□□ -0.04
COL18A1-204ENST00000400337 C1orf147Q96MC9 270 aaPredicted RBP14.79□□□□□ -0.04
COL18A1-204ENST00000400337 ZNF329Q86UD4 541 aa14.79□□□□□ -0.04
COL18A1-204ENST00000400337 Q6ZR03 302 aa14.79□□□□□ -0.04
COL18A1-204ENST00000400337 MYLKQ15746 1914 aa14.79□□□□□ -0.04
COL18A1-204ENST00000400337 Q8TAT8 98 aa14.79□□□□□ -0.04
COL18A1-204ENST00000400337 PCNX1Q96RV3 2341 aa14.78□□□□□ -0.04
COL18A1-204ENST00000400337 ZNF503-AS2A6NEH8 195 aa14.78□□□□□ -0.04
COL18A1-204ENST00000400337 ZNF688P0C7X2 276 aa14.78□□□□□ -0.04
COL18A1-204ENST00000400337 SAA4P35542 130 aa14.78□□□□□ -0.04
COL18A1-204ENST00000400337 FANCMQ8IYD8 2048 aa14.78□□□□□ -0.04
COL18A1-204ENST00000400337 TDGF1P13385 188 aa14.78□□□□□ -0.04
COL18A1-204ENST00000400337 PRTN3P24158 256 aa14.78□□□□□ -0.04
COL18A1-204ENST00000400337 TMEM155Q4W5P6 130 aa14.78□□□□□ -0.04
COL18A1-204ENST00000400337 ORMDL2Q53FV1 153 aa14.78□□□□□ -0.04
COL18A1-204ENST00000400337 IGFL4Q6B9Z1 124 aa14.78□□□□□ -0.04
COL18A1-204ENST00000400337 HIST3H2BBQ8N257 126 aa14.78□□□□□ -0.04
COL18A1-204ENST00000400337 TRAV8-1A0A0A6YYK1 113 aa14.78□□□□□ -0.04
COL18A1-204ENST00000400337 TRBV7-1A0A0A6YYK4 115 aa14.78□□□□□ -0.04
COL18A1-204ENST00000400337 NCR2O95944 276 aa14.78□□□□□ -0.04
COL18A1-204ENST00000400337 TNFSF13O75888 250 aa14.77□□□□□ -0.04
COL18A1-204ENST00000400337 TYMSP04818 313 aa14.77□□□□□ -0.04
COL18A1-204ENST00000400337 PLA2G2CQ5R387 149 aa14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms