RNA–Protein interactions for RNA: ENST00000397906.6

TTC28-201, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TTC28, Length 11,795 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-201ENST00000397906 ZNF362Q5T0B9 420 aaPredicted RBP9.27□□□□□ -0.92
TTC28-201ENST00000397906 FREM3P0C091 2139 aa9.27□□□□□ -0.92
TTC28-201ENST00000397906 DOCK8Q8NF50 2099 aa9.27□□□□□ -0.92
TTC28-201ENST00000397906 NCR2O95944 276 aa9.27□□□□□ -0.92
TTC28-201ENST00000397906 SRP19P09132 144 aaKnown RBP9.27□□□□□ -0.92
TTC28-201ENST00000397906 SPSB3Q6PJ21 355 aa9.27□□□□□ -0.92
TTC28-201ENST00000397906 TMEM95Q3KNT9 176 aa9.27□□□□□ -0.93
TTC28-201ENST00000397906 PNRC2Q9NPJ4 139 aaKnown RBP9.27□□□□□ -0.93
TTC28-201ENST00000397906 WDR81Q562E7 1941 aa9.27□□□□□ -0.93
TTC28-201ENST00000397906 MYO7BQ6PIF6 2116 aa9.27□□□□□ -0.93
TTC28-201ENST00000397906 TREML4Q6UXN2 200 aa9.27□□□□□ -0.93
TTC28-201ENST00000397906 PHLDA1Q8WV24 401 aaPredicted RBP9.27□□□□□ -0.93
TTC28-201ENST00000397906 RNF144BQ7Z419 303 aa9.27□□□□□ -0.93
TTC28-201ENST00000397906 SPTBN2O15020 2390 aa9.27□□□□□ -0.93
TTC28-201ENST00000397906 COL6A6A6NMZ7 2263 aa9.27□□□□□ -0.93
TTC28-201ENST00000397906 XCL2Q9UBD3 114 aa9.27□□□□□ -0.93
TTC28-201ENST00000397906 LINC00473A8K010 186 aa9.27□□□□□ -0.93
TTC28-201ENST00000397906 CMC4P56277 68 aaPredicted RBP9.27□□□□□ -0.93
TTC28-201ENST00000397906 IGKV1-16P04430 117 aa9.27□□□□□ -0.93
TTC28-201ENST00000397906 C21orf62-AS1Q17RA5 79 aa9.27□□□□□ -0.93
TTC28-201ENST00000397906 RNF182Q8N6D2 247 aa9.26□□□□□ -0.93
TTC28-201ENST00000397906 CHTOPQ9Y3Y2 248 aaKnown RBP9.26□□□□□ -0.93
TTC28-201ENST00000397906 KIAA1671Q9BY89 1806 aa9.26□□□□□ -0.93
TTC28-201ENST00000397906 A0A1B0GW15 77 aa9.26□□□□□ -0.93
TTC28-201ENST00000397906 LINC00614P0C842 121 aa9.26□□□□□ -0.93
TTC28-201ENST00000397906 A0A1B0GWJ7 208 aa9.26□□□□□ -0.93
TTC28-201ENST00000397906 SIGLEC9Q9Y336 463 aa9.26□□□□□ -0.93
TTC28-201ENST00000397906 ADMP35318 185 aa9.26□□□□□ -0.93
TTC28-201ENST00000397906 RNF126Q9BV68 326 aa9.26□□□□□ -0.93
TTC28-201ENST00000397906 C1QTNF4Q9BXJ3 329 aa9.26□□□□□ -0.93
TTC28-201ENST00000397906 RNF222A6NCQ9 220 aa9.26□□□□□ -0.93
TTC28-201ENST00000397906 C1QL4Q86Z23 238 aa9.26□□□□□ -0.93
TTC28-201ENST00000397906 USMG5Q96IX5 58 aa9.26□□□□□ -0.93
TTC28-201ENST00000397906 GFI1Q99684 422 aa9.26□□□□□ -0.93
TTC28-201ENST00000397906 DEFB131AP59861 70 aa9.26□□□□□ -0.93
TTC28-201ENST00000397906 MGST2Q99735 147 aa9.26□□□□□ -0.93
TTC28-201ENST00000397906 ATP6V0E1O15342 81 aa9.25□□□□□ -0.93
TTC28-201ENST00000397906 TTC32Q5I0X7 151 aa9.25□□□□□ -0.93
TTC28-201ENST00000397906 TTC9CQ8N5M4 171 aa9.25□□□□□ -0.93
TTC28-201ENST00000397906 PI4KAP42356 2102 aa9.25□□□□□ -0.93
TTC28-201ENST00000397906 HBDP02042 147 aa9.25□□□□□ -0.93
TTC28-201ENST00000397906 RPL36AP83881 106 aaKnown RBP9.25□□□□□ -0.93
TTC28-201ENST00000397906 ERCC8Q13216 396 aa9.25□□□□□ -0.93
TTC28-201ENST00000397906 ZNF876PQ49A33 203 aa9.25□□□□□ -0.93
TTC28-201ENST00000397906 RPL36ALQ969Q0 106 aaKnown RBP9.25□□□□□ -0.93
TTC28-201ENST00000397906 A0A087WWL8 130 aa9.25□□□□□ -0.93
TTC28-201ENST00000397906 DAZ1Q9NQZ3 744 aaKnown RBP9.25□□□□□ -0.93
TTC28-201ENST00000397906 CACNA1BQ00975 2339 aa9.25□□□□□ -0.93
TTC28-201ENST00000397906 LINC01619G3V211 115 aa9.25□□□□□ -0.93
TTC28-201ENST00000397906 RPL23P62829 140 aaKnown RBP9.25□□□□□ -0.93
TTC28-201ENST00000397906 FAM90A9PA6NNJ1 464 aa9.25□□□□□ -0.93
TTC28-201ENST00000397906 F5H768 121 aa9.25□□□□□ -0.93
TTC28-201ENST00000397906 EP300Q09472 2414 aaPredicted RBP9.25□□□□□ -0.93
TTC28-201ENST00000397906 HGFACQ04756 655 aa9.25□□□□□ -0.93
TTC28-201ENST00000397906 CCL20P78556 96 aa9.25□□□□□ -0.93
TTC28-201ENST00000397906 PAX2Q02962 417 aa9.25□□□□□ -0.93
TTC28-201ENST00000397906 J3QRE1 110 aa9.25□□□□□ -0.93
TTC28-201ENST00000397906 OOSP1A8MZH6 123 aa9.24□□□□□ -0.93
TTC28-201ENST00000397906 CGB3P0DN86 165 aa9.24□□□□□ -0.93
TTC28-201ENST00000397906 ALPK2Q86TB3 2170 aa9.24□□□□□ -0.93
TTC28-201ENST00000397906 HOXA3O43365 443 aaPredicted RBP9.24□□□□□ -0.93
TTC28-201ENST00000397906 CTAG1AP78358 180 aa9.24□□□□□ -0.93
TTC28-201ENST00000397906 MPDZO75970 2070 aa9.24□□□□□ -0.93
TTC28-201ENST00000397906 TCRAP04437 139 aa9.24□□□□□ -0.93
TTC28-201ENST00000397906 C10orf126Q8N4M7 172 aa9.24□□□□□ -0.93
TTC28-201ENST00000397906 WFDC1Q9HC57 220 aa9.24□□□□□ -0.93
TTC28-201ENST00000397906 LSM4Q9Y4Z0 139 aaKnown RBP9.24□□□□□ -0.93
TTC28-201ENST00000397906 POLEQ07864 2286 aa9.24□□□□□ -0.93
TTC28-201ENST00000397906 F2Z2F3 143 aa9.24□□□□□ -0.93
TTC28-201ENST00000397906 PLXNA3P51805 1871 aa9.24□□□□□ -0.93
TTC28-201ENST00000397906 MED12Q93074 2177 aa9.24□□□□□ -0.93
TTC28-201ENST00000397906 CD300EQ496F6 205 aaPredicted RBP9.24□□□□□ -0.93
TTC28-201ENST00000397906 LY6G6EA0A0G2JKS1 128 aa9.24□□□□□ -0.93
TTC28-201ENST00000397906 CD5P06127 495 aa9.24□□□□□ -0.93
TTC28-201ENST00000397906 DUX4L9Q6RFH8 374 aaPredicted RBP9.24□□□□□ -0.93
TTC28-201ENST00000397906 LINC00477Q96M19 166 aa9.24□□□□□ -0.93
TTC28-201ENST00000397906 U3KQA8 63 aa9.24□□□□□ -0.93
TTC28-201ENST00000397906 LCN12Q6JVE5 192 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 IGHV1-69DA0A0B4J2H0 117 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 ZNF98A6NK75 572 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 IGHV1-69P01742 117 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 TMEM155Q4W5P6 130 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 PLA2G2CQ5R387 149 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 K7ERU9 68 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 C1orf159Q96HA4 380 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 PRDM13Q9H4Q3 707 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 PLXNA4Q9HCM2 1894 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 TMEM86BQ8N661 226 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 IGHV3-16A0A0C4DH30 117 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 SERF1AO75920 110 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 DKK1O94907 266 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 ZNF138P52744 262 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 OR5A1Q8NGJ0 315 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 SIP14410 1827 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 TRAV13-1A0A0B4J241 112 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 SH2D1AO60880 128 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 NBL1P41271 181 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 SRSF3P84103 164 aaKnown RBP9.23□□□□□ -0.93
TTC28-201ENST00000397906 OCC1Q8TAD7 63 aa9.23□□□□□ -0.93
TTC28-201ENST00000397906 TRAV8-1A0A0A6YYK1 113 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms