RNA–Protein interactions for RNA: ENST00000397545.8

CCDC40-204, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS P3 TSL 5 BASIC

Gene CCDC40, Length 4,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-204ENST00000397545 KLF17Q5JT82 389 aaPredicted RBP8.85□□□□□ -0.99
CCDC40-204ENST00000397545 C1orf194Q5T5A4 169 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 DTX1Q86Y01 620 aa8.85□□□□□ -0.99
CCDC40-204ENST00000397545 ANKHD1Q8IWZ3 2542 aaKnown RBP8.84□□□□□ -0.99
CCDC40-204ENST00000397545 EREGO14944 169 aa8.84□□□□□ -0.99
CCDC40-204ENST00000397545 MLNRO43193 412 aa8.84□□□□□ -0.99
CCDC40-204ENST00000397545 LDLRAD2Q5SZI1 272 aa8.84□□□□□ -0.99
CCDC40-204ENST00000397545 TMEM170BQ5T4T1 132 aa8.84□□□□□ -0.99
CCDC40-204ENST00000397545 FER1L6-AS1Q8NA97 138 aa8.84□□□□□ -0.99
CCDC40-204ENST00000397545 RNF138Q8WVD3 245 aa8.84□□□□□ -0.99
CCDC40-204ENST00000397545 ASCL2Q99929 193 aa8.84□□□□□ -0.99
CCDC40-204ENST00000397545 PLXNB1O43157 2135 aa8.84□□□□□ -0.99
CCDC40-204ENST00000397545 TMEM238LA0A1B0GVL6 79 aa8.84□□□□□ -0.99
CCDC40-204ENST00000397545 A6NJY4 79 aa8.84□□□□□ -0.99
CCDC40-204ENST00000397545 SMIM13P0DJ93 91 aa8.84□□□□□ -0.99
CCDC40-204ENST00000397545 ID1P41134 155 aa8.84□□□□□ -0.99
CCDC40-204ENST00000397545 CHODLQ9H9P2 273 aa8.84□□□□□ -0.99
CCDC40-204ENST00000397545 IGHV3-11P01762 117 aa8.84□□□□□ -0.99
CCDC40-204ENST00000397545 NUTF2P61970 127 aaKnown RBP8.84□□□□□ -0.99
CCDC40-204ENST00000397545 CACNG7P62955 275 aa8.84□□□□□ -0.99
CCDC40-204ENST00000397545 EBLN2Q6P2I7 272 aa8.84□□□□□ -0.99
CCDC40-204ENST00000397545 CLEC19AQ6UXS0 136 aa8.84□□□□□ -0.99
CCDC40-204ENST00000397545 CIARTQ8N365 385 aaPredicted RBP8.84□□□□□ -0.99
CCDC40-204ENST00000397545 DYNLRB2Q8TF09 96 aa8.84□□□□□ -0.99
CCDC40-204ENST00000397545 LSM4Q9Y4Z0 139 aaKnown RBP8.84□□□□□ -0.99
CCDC40-204ENST00000397545 ZNF462Q96JM2 2506 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 PMS2P5A8MQ11 134 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 APOMO95445 188 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 C3orf79P0CE67 100 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 ZNF883P0CG24 379 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 FMC1Q96HJ9 113 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 SPCS1Q9Y6A9 102 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 NPIPB5A8MRT5 1133 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 SRSF7Q16629 238 aaKnown RBP eCLIP8.83□□□□□ -1
CCDC40-204ENST00000397545 ASCL4Q6XD76 172 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 DEFB104AQ8WTQ1 72 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 MEGF9Q9H1U4 602 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 PSG8Q9UQ74 426 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 A0A1W2PS18 150 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 TRGV3P03979 118 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 IGKV1-16P04430 117 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 PFN1P07737 140 aaKnown RBP8.83□□□□□ -1
CCDC40-204ENST00000397545 ATP5G2Q06055 141 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 GLMPQ8WWB7 406 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 RNF125Q96EQ8 232 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 hDV102S1A0JD36 115 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 NDUFA3O95167 84 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 EVI2AP22794 236 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 ACTL10Q5JWF8 245 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 FAM71F2Q6NXP2 309 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 LYPD6Q86Y78 171 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 TTC9CQ8N5M4 171 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 TSKUQ8WUA8 353 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 LINC00527Q9UJ94 153 aa8.83□□□□□ -1
CCDC40-204ENST00000397545 CPAMD8Q8IZJ3 1885 aa8.82□□□□□ -1
CCDC40-204ENST00000397545 ZNF56Q15929 161 aa8.82□□□□□ -1
CCDC40-204ENST00000397545 FBLN7Q53RD9 439 aa8.82□□□□□ -1
CCDC40-204ENST00000397545 ZNF418Q8TF45 676 aaPredicted RBP8.82□□□□□ -1
CCDC40-204ENST00000397545 SCRT1Q9BWW7 348 aa8.82□□□□□ -1
CCDC40-204ENST00000397545 TMEM133Q9H2Q1 129 aa8.82□□□□□ -1
CCDC40-204ENST00000397545 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.82□□□□□ -1
CCDC40-204ENST00000397545 TIMM23O14925 209 aa8.82□□□□□ -1
CCDC40-204ENST00000397545 IGKV1-39P01597 117 aa8.82□□□□□ -1
CCDC40-204ENST00000397545 IGKV1D-39P04432 117 aa8.82□□□□□ -1
CCDC40-204ENST00000397545 CLEC2AQ6UVW9 174 aa8.82□□□□□ -1
CCDC40-204ENST00000397545 NHP2Q9NX24 153 aaKnown RBP8.82□□□□□ -1
CCDC40-204ENST00000397545 IGKV1D-17A0A075B6S4 117 aa8.82□□□□□ -1
CCDC40-204ENST00000397545 NCR2O95944 276 aa8.82□□□□□ -1
CCDC40-204ENST00000397545 TMPRSS3P57727 454 aa8.82□□□□□ -1
CCDC40-204ENST00000397545 ZNF726P1Q15940 193 aa8.82□□□□□ -1
CCDC40-204ENST00000397545 ARPC1AQ92747 370 aa8.82□□□□□ -1
CCDC40-204ENST00000397545 A0A1B0GWB2 263 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 DLEU1O43261 78 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 PSG1P11464 419 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 FOXL2NBQ6ZUU3 175 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 FAM57AQ8TBR7 257 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 OTORQ9NRC9 128 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 CDKN1AP38936 164 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 FAM159AQ6UWV7 190 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 SCGB3A1Q96QR1 104 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 JKAMPQ9P055 326 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 IGKV3OR2-268A0A0C4DH90 116 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 SFTPCP11686 197 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 TDGF1P13385 188 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 AREGP15514 252 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 LGALS3P17931 250 aaKnown RBP8.81□□□□□ -1
CCDC40-204ENST00000397545 TSPOP30536 169 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 LEPP41159 167 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 ASPHD1Q5U4P2 390 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 CDPF1Q6NVV7 123 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 PRSS33Q8NF86 280 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 KIR2DL4Q99706 377 aa8.81□□□□□ -1
CCDC40-204ENST00000397545 ZNF503-AS2A6NEH8 195 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 PRSS8Q16651 343 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 AMMECR1LQ6DCA0 310 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 MRPL16Q9NX20 251 aaKnown RBP8.8□□□□□ -1
CCDC40-204ENST00000397545 COL5A1P20908 1838 aaPredicted RBP8.8□□□□□ -1
CCDC40-204ENST00000397545 TRBV6-6A0A0A6YYG2 114 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 MPV17L2Q567V2 206 aa8.8□□□□□ -1
CCDC40-204ENST00000397545 RNASE6Q93091 150 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 202.1 ms