RNA–Protein interactions for RNA: ENST00000397477.2

CPSF1P1-201, Transcript of cleavage and polyadenylation specific factor 1 pseudogene 1, humanhuman

BASIC

Gene CPSF1P1, Length 3,730 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1P1-201ENST00000397477 IGLV2-23P01705 113 aa8.36□□□□□ -1.07
CPSF1P1-201ENST00000397477 RPL15P61313 204 aaKnown RBP8.36□□□□□ -1.07
CPSF1P1-201ENST00000397477 IGFL4Q6B9Z1 124 aa8.36□□□□□ -1.07
CPSF1P1-201ENST00000397477 CIARTQ8N365 385 aaPredicted RBP8.36□□□□□ -1.07
CPSF1P1-201ENST00000397477 OR4F17Q8NGA8 305 aa8.36□□□□□ -1.07
CPSF1P1-201ENST00000397477 OR5R1Q8NH85 324 aa8.36□□□□□ -1.07
CPSF1P1-201ENST00000397477 C19orf24Q9BVV8 132 aa8.36□□□□□ -1.07
CPSF1P1-201ENST00000397477 TLN2Q9Y4G6 2542 aa8.36□□□□□ -1.07
CPSF1P1-201ENST00000397477 IGLC7A0M8Q6 106 aa8.36□□□□□ -1.07
CPSF1P1-201ENST00000397477 GCGP01275 180 aa8.36□□□□□ -1.07
CPSF1P1-201ENST00000397477 AMY1AP04745 511 aa8.36□□□□□ -1.07
CPSF1P1-201ENST00000397477 AARDQ4LEZ3 155 aa8.36□□□□□ -1.07
CPSF1P1-201ENST00000397477 LINC00527Q9UJ94 153 aa8.36□□□□□ -1.07
CPSF1P1-201ENST00000397477 EPDR1Q9UM22 224 aa8.36□□□□□ -1.07
CPSF1P1-201ENST00000397477 TBL2Q9Y4P3 447 aaKnown RBP8.36□□□□□ -1.07
CPSF1P1-201ENST00000397477 CGB1A6NKQ9 187 aa8.35□□□□□ -1.07
CPSF1P1-201ENST00000397477 BRS3P32247 399 aa8.35□□□□□ -1.07
CPSF1P1-201ENST00000397477 CEACAM3P40198 252 aa8.35□□□□□ -1.07
CPSF1P1-201ENST00000397477 CA7P43166 264 aa8.35□□□□□ -1.07
CPSF1P1-201ENST00000397477 COTL1Q14019 142 aa8.35□□□□□ -1.07
CPSF1P1-201ENST00000397477 PMCHL1Q16048 86 aa8.35□□□□□ -1.07
CPSF1P1-201ENST00000397477 WDR73Q6P4I2 378 aa8.35□□□□□ -1.07
CPSF1P1-201ENST00000397477 NEU1Q99519 415 aa8.35□□□□□ -1.07
CPSF1P1-201ENST00000397477 ASH1LQ9NR48 2969 aaKnown RBP8.35□□□□□ -1.07
CPSF1P1-201ENST00000397477 C9JCJ5 164 aa8.35□□□□□ -1.07
CPSF1P1-201ENST00000397477 DIRC3C9JPN6 131 aa8.35□□□□□ -1.07
CPSF1P1-201ENST00000397477 HIST1H1EP10412 219 aaKnown RBP8.35□□□□□ -1.07
CPSF1P1-201ENST00000397477 TCTAP57738 103 aa8.35□□□□□ -1.07
CPSF1P1-201ENST00000397477 ZNF329Q86UD4 541 aa8.35□□□□□ -1.07
CPSF1P1-201ENST00000397477 FAM167A-AS1Q96KT0 104 aa8.35□□□□□ -1.07
CPSF1P1-201ENST00000397477 TXN2Q99757 166 aa8.35□□□□□ -1.07
CPSF1P1-201ENST00000397477 M0R3E3 92 aa8.34□□□□□ -1.07
CPSF1P1-201ENST00000397477 ZNF207O43670 478 aaKnown RBP8.34□□□□□ -1.07
CPSF1P1-201ENST00000397477 COMPP49747 757 aaPredicted RBP8.34□□□□□ -1.07
CPSF1P1-201ENST00000397477 TDRG1Q3Y452 100 aa8.34□□□□□ -1.07
CPSF1P1-201ENST00000397477 TEX45Q8NA69 505 aa8.34□□□□□ -1.07
CPSF1P1-201ENST00000397477 C17orf77Q96MU5 243 aa8.34□□□□□ -1.07
CPSF1P1-201ENST00000397477 PTPRBP23467 1997 aa8.34□□□□□ -1.07
CPSF1P1-201ENST00000397477 IGKV3-7A0A075B6H7 116 aa8.34□□□□□ -1.07
CPSF1P1-201ENST00000397477 OR2T8A6NH00 312 aa8.34□□□□□ -1.07
CPSF1P1-201ENST00000397477 ARL6IP6Q8N6S5 226 aa8.34□□□□□ -1.07
CPSF1P1-201ENST00000397477 OR4A5Q8NH83 315 aa8.34□□□□□ -1.07
CPSF1P1-201ENST00000397477 ST6GALNAC6Q969X2 333 aa8.34□□□□□ -1.07
CPSF1P1-201ENST00000397477 M0R2Z0 102 aa8.34□□□□□ -1.07
CPSF1P1-201ENST00000397477 SIAH2O43255 324 aa8.34□□□□□ -1.07
CPSF1P1-201ENST00000397477 TYMSP04818 313 aa8.34□□□□□ -1.07
CPSF1P1-201ENST00000397477 ATP5IP56385 69 aaPredicted RBP8.34□□□□□ -1.07
CPSF1P1-201ENST00000397477 STXBP6Q8NFX7 210 aa8.34□□□□□ -1.07
CPSF1P1-201ENST00000397477 CDC42EP3Q9UKI2 254 aa8.34□□□□□ -1.07
CPSF1P1-201ENST00000397477 RELQ04864 619 aaPredicted RBP8.33□□□□□ -1.08
CPSF1P1-201ENST00000397477 NOL4LQ96MY1 436 aaPredicted RBP8.33□□□□□ -1.08
CPSF1P1-201ENST00000397477 RCHY1Q96PM5 261 aa8.33□□□□□ -1.08
CPSF1P1-201ENST00000397477 OSTCQ9NRP0 149 aa8.33□□□□□ -1.08
CPSF1P1-201ENST00000397477 F11RQ9Y624 299 aaKnown RBP8.33□□□□□ -1.08
CPSF1P1-201ENST00000397477 J3KRW8 73 aa8.33□□□□□ -1.08
CPSF1P1-201ENST00000397477 NBR2O15453 112 aa8.33□□□□□ -1.08
CPSF1P1-201ENST00000397477 FXYD5Q96DB9 178 aa8.33□□□□□ -1.08
CPSF1P1-201ENST00000397477 IGKV1D-37A0A075B6S9 117 aa8.33□□□□□ -1.08
CPSF1P1-201ENST00000397477 LCN12Q6JVE5 192 aa8.33□□□□□ -1.08
CPSF1P1-201ENST00000397477 NUP35Q8NFH5 326 aa8.33□□□□□ -1.08
CPSF1P1-201ENST00000397477 GOLT1BQ9Y3E0 138 aa8.33□□□□□ -1.08
CPSF1P1-201ENST00000397477 SETD2Q9BYW2 2564 aaPredicted RBP8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 PKD1L2Q7Z442 2459 aa8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 CT45A10P0DMU9 189 aa8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 CX3CL1P78423 397 aa8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 SLAQ13239 276 aa8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 RNF151Q2KHN1 245 aa8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 TPTE2P1Q5T6R2 138 aa8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 C11orf52Q96A22 123 aa8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 SLC25A39Q9BZJ4 359 aaPredicted RBP8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 HLA-DQA1P01909 254 aa8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 ZNF138P52744 262 aa8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 Q6ZWC4 215 aa8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 BPIFA4PQ86YQ2 179 aa8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 GPR82Q96P67 336 aa8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 NRN1Q9NPD7 142 aa8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 MSRB2Q9Y3D2 182 aa8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 USP9XQ93008 2570 aaPredicted RBP8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 A6NNC1 897 aa8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 C11orf42Q8N5U0 333 aa8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 LINC00574Q9H8X3 128 aa8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 KAAG1Q9UBP8 84 aa8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 FASNP49327 2511 aaKnown RBP8.32□□□□□ -1.08
CPSF1P1-201ENST00000397477 IZUMO1RA6ND01 250 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 ZNF785A8K8V0 405 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 K7EQM0 130 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 CSN1S1P47710 185 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 RPL11P62913 178 aaKnown RBP8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 ADORA2A-AS1P86434 159 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 VMO1Q7Z5L0 202 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 LINC00311Q8N616 119 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 C5orf17Q8NAS9 161 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 MCRIP2Q9BUT9 160 aaKnown RBP8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 AAMDCQ9H7C9 122 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 PTPN13Q12923 2485 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 LRRK2Q5S007 2527 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 LOC389332A0A1B0GUA5 103 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 FNDC10F2Z333 226 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 DLX6P56179 175 aa8.31□□□□□ -1.08
CPSF1P1-201ENST00000397477 TMEM183BQ1AE95 376 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms