RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 Q5XG85 94 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 TMEM136Q6ZRR5 245 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 SNX29P2Q8IUI4 249 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 MIEN1Q9BRT3 115 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 TMEM133Q9H2Q1 129 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 DUSP21Q9H596 190 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 TAS2R8Q9NYW2 309 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 MPC1Q9Y5U8 109 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 BAHCC1Q9P281 2608 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 VWA8A3KMH1 1905 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 BAZ2AQ9UIF9 1905 aaKnown RBP2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 PLXNB3Q9ULL4 1909 aa2.75□□□□□ -1.97
HMGB1P10-201ENST00000395823 DNMBPQ6XZF7 1577 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 GPR179Q6PRD1 2367 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 ARHGEF12Q9NZN5 1544 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 POLA1P09884 1462 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 TRAV27A0A087WT01 109 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 IGHV3-21A0A0B4J1V1 117 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 TRAV13-1A0A0B4J241 112 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 TRAV41A0A0B4J266 112 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 SMIM31A0A1B0GVY4 71 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 C19orf84I3L1E1 186 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 I3L521 148 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 UBFD1O14562 309 aaKnown RBP2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 TRGV3P03979 118 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 PRM2P04554 102 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 ZNF14P17017 642 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 ZNF93P35789 620 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 CSN1S1P47710 185 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 FGF12P61328 243 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 PLGLB1Q02325 96 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 HES1Q14469 280 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 CCSMST1Q4G0I0 132 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 C6orf52Q5T4I8 152 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 SPINT4Q6UDR6 99 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 IGFL1Q6UW32 110 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 LCN15Q6UWW0 184 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 GKN2Q86XP6 184 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 GPHB5Q86YW7 130 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 ATOH7Q8N100 152 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 OR5D14Q8NGL3 314 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 SHANK2-AS3Q9BTD1 123 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 ADAT1Q9BUB4 502 aaKnown RBP2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 SNRNP25Q9BV90 132 aaKnown RBP2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 SNHG12Q9BXW3 62 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 SNX12Q9UMY4 172 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 MRPS16Q9Y3D3 137 aaKnown RBP2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 CHD5Q8TDI0 1954 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 ABCA8O94911 1581 aa2.74□□□□□ -1.97
HMGB1P10-201ENST00000395823 DLC1Q96QB1 1528 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 A8MWP4 228 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 C1orf196B1AJZ1 125 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 K7ERS5 55 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 ZNF73O43830 326 aaPredicted RBP2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 NAPSAO96009 420 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 TNFP01375 233 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 C1QAP02745 245 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 BRS3P32247 399 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 UBE2BP63146 152 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 QRFPP83859 136 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 AKR1C1Q04828 323 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 ZNF141Q15928 474 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 AMTNQ6UX39 209 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 AMN1Q8IY45 258 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 TEX29Q8N6K0 151 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 OR5D16Q8NGK9 328 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 OR5C1Q8NGR4 320 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 OR4K13Q8NH42 304 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 OR4A5Q8NH83 315 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 FNDC9Q8TBE3 224 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 BRK1Q8WUW1 75 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 MRPL32Q9BYC8 188 aaKnown RBP2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 ZNF286AQ9HBT8 521 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 XAGE1AQ9HD64 81 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 RPRMQ9NS64 109 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 SLC39A9Q9NUM3 307 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 FUT9Q9Y231 359 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 ARHGAP31Q2M1Z3 1444 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 KIAA1107Q9UPP5 1409 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 MIA3Q5JRA6 1907 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 UNC13BO14795 1591 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 NRKQ7Z2Y5 1582 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 SHANK1Q9Y566 2161 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 C3P01024 1663 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 ADGBQ8N7X0 1667 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 THSD7AQ9UPZ6 1657 aa2.73□□□□□ -1.97
HMGB1P10-201ENST00000395823 A0A087X0T9 212 aa2.72□□□□□ -1.97
HMGB1P10-201ENST00000395823 A0A0G2JMM0 328 aa2.72□□□□□ -1.97
HMGB1P10-201ENST00000395823 A0A1W2PPB8 328 aa2.72□□□□□ -1.97
HMGB1P10-201ENST00000395823 KIR3DP1A8MWS1 328 aa2.72□□□□□ -1.97
HMGB1P10-201ENST00000395823 LEUTXA8MZ59 168 aa2.72□□□□□ -1.97
HMGB1P10-201ENST00000395823 FNDC10F2Z333 226 aa2.72□□□□□ -1.97
HMGB1P10-201ENST00000395823 LY6LH3BQJ8 138 aa2.72□□□□□ -1.97
HMGB1P10-201ENST00000395823 M0R378 163 aa2.72□□□□□ -1.97
HMGB1P10-201ENST00000395823 KDM6AO15550 1401 aaPredicted RBP2.72□□□□□ -1.97
HMGB1P10-201ENST00000395823 NDUFB2O95178 105 aa2.72□□□□□ -1.97
HMGB1P10-201ENST00000395823 SOD1P00441 154 aa2.72□□□□□ -1.97
HMGB1P10-201ENST00000395823 IGKV1D-33P01593 117 aa2.72□□□□□ -1.97
HMGB1P10-201ENST00000395823 IGKV1-33P01594 117 aa2.72□□□□□ -1.97
HMGB1P10-201ENST00000395823 PTHLHP12272 177 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms