RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ZNF266Q14584 549 aa12.41□□□□□ -0.42
CXCL1-201ENST00000395761 USF2Q15853 346 aaPredicted RBP12.41□□□□□ -0.42
CXCL1-201ENST00000395761 METTL26Q96S19 204 aa12.41□□□□□ -0.42
CXCL1-201ENST00000395761 ARPC5LQ9BPX5 153 aa12.41□□□□□ -0.42
CXCL1-201ENST00000395761 ARL6Q9H0F7 186 aa12.41□□□□□ -0.42
CXCL1-201ENST00000395761 CYTL1Q9NRR1 136 aa12.41□□□□□ -0.42
CXCL1-201ENST00000395761 SMCO3A2RU48 225 aa12.4□□□□□ -0.42
CXCL1-201ENST00000395761 TSPAN4O14817 238 aa12.4□□□□□ -0.42
CXCL1-201ENST00000395761 JTBO76095 146 aa12.4□□□□□ -0.42
CXCL1-201ENST00000395761 IFNA5P01569 189 aa12.4□□□□□ -0.42
CXCL1-201ENST00000395761 FAM90A2PQ658T7 463 aa12.4□□□□□ -0.42
CXCL1-201ENST00000395761 GTSCR1Q86UQ5 136 aa12.4□□□□□ -0.42
CXCL1-201ENST00000395761 OR51G1Q8NGK1 321 aa12.4□□□□□ -0.42
CXCL1-201ENST00000395761 WDR61Q9GZS3 305 aaKnown RBP12.4□□□□□ -0.42
CXCL1-201ENST00000395761 U3KQE9 123 aa12.4□□□□□ -0.42
CXCL1-201ENST00000395761 BORCS7-ASMTA0A0B4J1R7 106 aa12.39□□□□□ -0.43
CXCL1-201ENST00000395761 BCL2L11O43521 198 aa12.39□□□□□ -0.43
CXCL1-201ENST00000395761 IGHV4-30-4P0DP06 118 aa12.39□□□□□ -0.43
CXCL1-201ENST00000395761 RAB31Q13636 194 aa12.39□□□□□ -0.43
CXCL1-201ENST00000395761 TMEM182Q6ZP80 229 aaPredicted RBP12.39□□□□□ -0.43
CXCL1-201ENST00000395761 TCF24Q7RTU0 167 aa12.39□□□□□ -0.43
CXCL1-201ENST00000395761 RNF125Q96EQ8 232 aa12.39□□□□□ -0.43
CXCL1-201ENST00000395761 WFDC10AQ9H1F0 79 aa12.39□□□□□ -0.43
CXCL1-201ENST00000395761 IGKV3-7A0A075B6H7 116 aa12.38□□□□□ -0.43
CXCL1-201ENST00000395761 UBE2L5PA0A1B0GUS4 154 aa12.38□□□□□ -0.43
CXCL1-201ENST00000395761 KANTRA0A1W2PQU2 76 aa12.38□□□□□ -0.43
CXCL1-201ENST00000395761 FABP1P07148 127 aa12.38□□□□□ -0.43
CXCL1-201ENST00000395761 HNRNPCP07910 306 aaKnown RBP eCLIP12.38□□□□□ -0.43
CXCL1-201ENST00000395761 C4BPBP20851 252 aa12.38□□□□□ -0.43
CXCL1-201ENST00000395761 GATA2P23769 480 aaPredicted RBP12.38□□□□□ -0.43
CXCL1-201ENST00000395761 NKX2-5P52952 324 aaPredicted RBP12.38□□□□□ -0.43
CXCL1-201ENST00000395761 SELENOTP62341 195 aa12.38□□□□□ -0.43
CXCL1-201ENST00000395761 RPL7L1Q6DKI1 246 aaKnown RBP12.38□□□□□ -0.43
CXCL1-201ENST00000395761 SCGB1C1Q8TD33 95 aa12.38□□□□□ -0.43
CXCL1-201ENST00000395761 MGST2Q99735 147 aa12.38□□□□□ -0.43
CXCL1-201ENST00000395761 SPAG8Q99932 426 aaPredicted RBP12.38□□□□□ -0.43
CXCL1-201ENST00000395761 PBDC1Q9BVG4 233 aa12.38□□□□□ -0.43
CXCL1-201ENST00000395761 ARV1Q9H2C2 271 aa12.38□□□□□ -0.43
CXCL1-201ENST00000395761 SLC45A2Q9UMX9 530 aa12.38□□□□□ -0.43
CXCL1-201ENST00000395761 BOLA2-SMG1P6H3BVE0 249 aa12.37□□□□□ -0.43
CXCL1-201ENST00000395761 AGPAT2O15120 278 aa12.37□□□□□ -0.43
CXCL1-201ENST00000395761 FRMD6-AS1P0C7T7 363 aa12.37□□□□□ -0.43
CXCL1-201ENST00000395761 FGF7P21781 194 aa12.37□□□□□ -0.43
CXCL1-201ENST00000395761 OPCMLQ14982 345 aa12.37□□□□□ -0.43
CXCL1-201ENST00000395761 CYP2G1PQ6ZSU1 146 aa12.37□□□□□ -0.43
CXCL1-201ENST00000395761 GBGT1Q8N5D6 347 aa12.37□□□□□ -0.43
CXCL1-201ENST00000395761 DEFB125Q8N687 156 aa12.37□□□□□ -0.43
CXCL1-201ENST00000395761 ASCL2Q99929 193 aa12.37□□□□□ -0.43
CXCL1-201ENST00000395761 B9D2Q9BPU9 175 aa12.37□□□□□ -0.43
CXCL1-201ENST00000395761 C19orf73Q9NVV2 129 aa12.37□□□□□ -0.43
CXCL1-201ENST00000395761 RABAC1Q9UI14 185 aa12.37□□□□□ -0.43
CXCL1-201ENST00000395761 A0A1W2PS18 150 aa12.36□□□□□ -0.43
CXCL1-201ENST00000395761 OR11H12B2RN74 326 aa12.36□□□□□ -0.43
CXCL1-201ENST00000395761 CFDP00746 253 aaPredicted RBP12.36□□□□□ -0.43
CXCL1-201ENST00000395761 BMI1P35226 326 aa12.36□□□□□ -0.43
CXCL1-201ENST00000395761 RPL29P47914 159 aaKnown RBP12.36□□□□□ -0.43
CXCL1-201ENST00000395761 TFPI2P48307 235 aa12.36□□□□□ -0.43
CXCL1-201ENST00000395761 CAMLGP49069 296 aa12.36□□□□□ -0.43
CXCL1-201ENST00000395761 LYZP61626 148 aa12.36□□□□□ -0.43
CXCL1-201ENST00000395761 STPG3Q8N7X2 389 aa12.36□□□□□ -0.43
CXCL1-201ENST00000395761 GGTLC1Q9BX51 225 aa12.36□□□□□ -0.43
CXCL1-201ENST00000395761 NPCDR1Q9BY65 106 aa12.36□□□□□ -0.43
CXCL1-201ENST00000395761 DNAH9Q9NYC9 4486 aa12.35□□□□□ -0.43
CXCL1-201ENST00000395761 A8MZ25 164 aa12.35□□□□□ -0.43
CXCL1-201ENST00000395761 RPL11P62913 178 aaKnown RBP12.35□□□□□ -0.43
CXCL1-201ENST00000395761 EIF5AP63241 154 aaKnown RBP12.35□□□□□ -0.43
CXCL1-201ENST00000395761 PRR20EP86478 221 aa12.35□□□□□ -0.43
CXCL1-201ENST00000395761 PRR20CP86479 221 aa12.35□□□□□ -0.43
CXCL1-201ENST00000395761 PRR20DP86480 221 aa12.35□□□□□ -0.43
CXCL1-201ENST00000395761 PRR20BP86481 221 aa12.35□□□□□ -0.43
CXCL1-201ENST00000395761 PRR20AP86496 221 aa12.35□□□□□ -0.43
CXCL1-201ENST00000395761 C16orf54Q6UWD8 224 aa12.35□□□□□ -0.43
CXCL1-201ENST00000395761 SLC51BQ86UW2 128 aa12.35□□□□□ -0.43
CXCL1-201ENST00000395761 WFDC3Q8IUB2 231 aa12.35□□□□□ -0.43
CXCL1-201ENST00000395761 STOML3Q8TAV4 291 aa12.35□□□□□ -0.43
CXCL1-201ENST00000395761 NARS2Q96I59 477 aaKnown RBP12.35□□□□□ -0.43
CXCL1-201ENST00000395761 MS4A6AQ9H2W1 248 aa12.35□□□□□ -0.43
CXCL1-201ENST00000395761 TMEM231Q9H6L2 316 aa12.35□□□□□ -0.43
CXCL1-201ENST00000395761 UBQLN2Q9UHD9 624 aa12.35□□□□□ -0.43
CXCL1-201ENST00000395761 TIMM9Q9Y5J7 89 aa12.35□□□□□ -0.43
CXCL1-201ENST00000395761 OR4C46A6NHA9 309 aa12.34□□□□□ -0.43
CXCL1-201ENST00000395761 C17orf112F2Z3M2 114 aa12.34□□□□□ -0.43
CXCL1-201ENST00000395761 BUB3O43684 328 aa12.34□□□□□ -0.43
CXCL1-201ENST00000395761 CD5P06127 495 aa12.34□□□□□ -0.43
CXCL1-201ENST00000395761 LINC00869P0C866 280 aa12.34□□□□□ -0.43
CXCL1-201ENST00000395761 PLP1P60201 277 aa12.34□□□□□ -0.43
CXCL1-201ENST00000395761 ZNF709Q8N972 641 aa12.34□□□□□ -0.43
CXCL1-201ENST00000395761 BPIFCQ8NFQ6 507 aa12.34□□□□□ -0.43
CXCL1-201ENST00000395761 GLMPQ8WWB7 406 aa12.34□□□□□ -0.43
CXCL1-201ENST00000395761 GNPNAT1Q96EK6 184 aaPredicted RBP12.34□□□□□ -0.43
CXCL1-201ENST00000395761 GRAMD2BQ96HH9 432 aa12.34□□□□□ -0.43
CXCL1-201ENST00000395761 PSMG3Q9BT73 122 aaPredicted RBP12.34□□□□□ -0.43
CXCL1-201ENST00000395761 ZNF471Q9BX82 626 aaPredicted RBP12.34□□□□□ -0.43
CXCL1-201ENST00000395761 TUBA4BQ9H853 241 aa12.34□□□□□ -0.43
CXCL1-201ENST00000395761 ORM2P19652 201 aa12.33□□□□□ -0.44
CXCL1-201ENST00000395761 ATP6V0CP27449 155 aa12.33□□□□□ -0.44
CXCL1-201ENST00000395761 ODF3L2Q3SX64 289 aa12.33□□□□□ -0.44
CXCL1-201ENST00000395761 PXDC1Q5TGL8 231 aa12.33□□□□□ -0.44
CXCL1-201ENST00000395761 SBSPONQ8IVN8 264 aa12.33□□□□□ -0.44
CXCL1-201ENST00000395761 RSG1Q9BU20 258 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms