RNA–Protein interactions for RNA: ENST00000395198.7

HERC4-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HERC4, Length 4,445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-204ENST00000395198 C15orf40Q8WUR7 153 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 NEUROG1Q92886 237 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 DSCR8Q96T75 97 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 AGPAT4-IT1Q9H0P7 198 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 BANF2Q9H503 90 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 C11orf21Q9P2W6 132 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 MIA3Q5JRA6 1907 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 PATJQ8NI35 1801 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 TRAV41A0A0B4J266 112 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 H0YGG7 62 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 K7ESM1 405 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 SOCS2O14508 198 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 UQCRQO14949 82 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 PSMB9P28065 219 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 HCFC1P51610 2035 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 NOXRED1Q6NXP6 359 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 SPENQ96T58 3664 aaKnown RBP3.28□□□□□ -1.88
HERC4-204ENST00000395198 ZNF747Q9BV97 191 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 TRPM7Q96QT4 1865 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 CA6P23280 308 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 FP248Q71RG6 208 aaPredicted RBP3.28□□□□□ -1.88
HERC4-204ENST00000395198 CCL4L1Q8NHW4 92 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 NMNAT3Q96T66 252 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 DIDO1Q9BTC0 2240 aaKnown RBP3.28□□□□□ -1.88
HERC4-204ENST00000395198 PATE3B3GLJ2 98 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 DAD1P61803 113 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 IGFBP7Q16270 282 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 RRN3P1Q2M238 152 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 ZNF678Q5SXM1 525 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 TMEM70Q9BUB7 260 aa3.28□□□□□ -1.88
HERC4-204ENST00000395198 DOCK8Q8NF50 2099 aa3.28□□□□□ -1.89
HERC4-204ENST00000395198 EML6Q6ZMW3 1958 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 TRBV7-6A0A0J9YX20 115 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 M0R378 163 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 NDUFS5O43920 106 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 RBP4P02753 201 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 SP5Q6BEB4 398 aaPredicted RBP3.27□□□□□ -1.89
HERC4-204ENST00000395198 SLC25A34Q6PIV7 304 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 COMMD6Q7Z4G1 85 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 CHCHD10Q8WYQ3 142 aaPredicted RBP3.27□□□□□ -1.89
HERC4-204ENST00000395198 C18orf12Q96KH6 178 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 CHCHD5Q9BSY4 110 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 NDUFB11Q9NX14 153 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 ROS1P08922 2347 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 FAM208BQ5VWN6 2430 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 IGHV1OR15-9A0A0B4J2B8 117 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 SPTY2D1-AS1A0A0U1RR47 76 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 F8W735 103 aaPredicted RBP3.27□□□□□ -1.89
HERC4-204ENST00000395198 M0R1X1 148 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 PTHP01270 115 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 WFDC2Q14508 124 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 DEFB109BQ30KR1 87 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 SH2D6Q7Z4S9 175 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 HMGN2P46Q86SG4 172 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 CNEP1R1Q8N9A8 125 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 OR2T10Q8NGZ9 312 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 ATP6V0E2Q8NHE4 81 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 VSTM2AQ8TAG5 236 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 PAXXQ9BUH6 204 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 ST20Q9HBF5 79 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 DNAJC15Q9Y5T4 150 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 MYO15AQ9UKN7 3530 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 CREBBPQ92793 2442 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 TRAV13-1A0A0B4J241 112 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 C11orf98E9PRG8 122 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 DEDDO75618 318 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 IGLV3-27P01718 113 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 CD3DP04234 171 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 SPTBP11277 2137 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 SCGB1D4Q6XE38 83 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 ODF3L1Q8IXM7 274 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 S100A16Q96FQ6 103 aaKnown RBP3.27□□□□□ -1.89
HERC4-204ENST00000395198 SHANK2-AS3Q9BTD1 123 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 CYSTM1Q9H1C7 97 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 LRRK1Q38SD2 2015 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 ACACBO00763 2458 aa3.27□□□□□ -1.89
HERC4-204ENST00000395198 LST1O00453 97 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 LYRM1O43325 122 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 IGHV3-9P01782 118 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 LRRC29Q8WV35 223 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 POP5Q969H6 163 aaKnown RBP3.26□□□□□ -1.89
HERC4-204ENST00000395198 PRELID3AQ96N28 172 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 IMMP2LQ96T52 175 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 CDH23Q9H251 3354 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 ZFHX3Q15911 3703 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 A0A087WWC5 75 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 A0A1W2PPM0 123 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 A8MWV9 139 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 H3BRM9 83 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 M0R381 172 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 SEC61BP60468 96 aaKnown RBP3.26□□□□□ -1.89
HERC4-204ENST00000395198 GUSBP11Q6P575 273 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 CLEC19AQ6UXS0 136 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 OR5C1Q8NGR4 320 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 OR10AG1Q8NH19 301 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 TMEM230Q96A57 120 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 DUSP21Q9H596 190 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 OCIAD1Q9NX40 245 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 SPCS1Q9Y6A9 102 aa3.26□□□□□ -1.89
HERC4-204ENST00000395198 PTPRQQ9UMZ3 2332 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms