RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 GPX1P07203 203 aa12.1□□□□□ -0.47
CPSF7-202ENST00000394888 MRPL54Q6P161 138 aaKnown RBP12.1□□□□□ -0.47
CPSF7-202ENST00000394888 BLNKQ8WV28 456 aa12.1□□□□□ -0.47
CPSF7-202ENST00000394888 CBLN4Q9NTU7 201 aa12.1□□□□□ -0.47
CPSF7-202ENST00000394888 ONECUT1Q9UBC0 465 aa12.1□□□□□ -0.47
CPSF7-202ENST00000394888 WI2-2373I1.2A0A1W2PRP0 233 aa12.1□□□□□ -0.47
CPSF7-202ENST00000394888 MGST1P10620 155 aaKnown RBP12.1□□□□□ -0.47
CPSF7-202ENST00000394888 ARF6P62330 175 aa12.1□□□□□ -0.47
CPSF7-202ENST00000394888 C1orf194Q5T5A4 169 aa12.1□□□□□ -0.47
CPSF7-202ENST00000394888 ETFRF1Q6IPR1 90 aa12.1□□□□□ -0.47
CPSF7-202ENST00000394888 OR8B3Q8NGG8 313 aa12.1□□□□□ -0.47
CPSF7-202ENST00000394888 OR8B2Q96RD0 313 aa12.1□□□□□ -0.47
CPSF7-202ENST00000394888 SRSF8Q9BRL6 282 aaKnown RBP12.1□□□□□ -0.47
CPSF7-202ENST00000394888 FAM103A1Q9BTL3 118 aaKnown RBP12.1□□□□□ -0.47
CPSF7-202ENST00000394888 TCRAP04437 139 aa12.1□□□□□ -0.47
CPSF7-202ENST00000394888 OR10J3Q5JRS4 329 aa12.1□□□□□ -0.47
CPSF7-202ENST00000394888 KLF17Q5JT82 389 aaPredicted RBP12.1□□□□□ -0.47
CPSF7-202ENST00000394888 NDUFAF3Q9BU61 184 aa12.1□□□□□ -0.47
CPSF7-202ENST00000394888 Q9H3A6 140 aa12.1□□□□□ -0.47
CPSF7-202ENST00000394888 NAGKQ9UJ70 344 aa12.1□□□□□ -0.47
CPSF7-202ENST00000394888 PGPA6NDG6 321 aa12.09□□□□□ -0.47
CPSF7-202ENST00000394888 BAGE2Q86Y30 109 aa12.09□□□□□ -0.47
CPSF7-202ENST00000394888 MRPL41Q8IXM3 137 aaKnown RBP12.09□□□□□ -0.47
CPSF7-202ENST00000394888 RPEQ96AT9 228 aa12.09□□□□□ -0.47
CPSF7-202ENST00000394888 IGLV11-55A0A075B6I3 123 aa12.09□□□□□ -0.47
CPSF7-202ENST00000394888 EREGO14944 169 aa12.09□□□□□ -0.47
CPSF7-202ENST00000394888 ZNF491Q8N8L2 437 aa12.09□□□□□ -0.47
CPSF7-202ENST00000394888 SMIM12Q96EX1 92 aa12.09□□□□□ -0.47
CPSF7-202ENST00000394888 GRAMD2BQ96HH9 432 aa12.09□□□□□ -0.47
CPSF7-202ENST00000394888 NEU1Q99519 415 aa12.09□□□□□ -0.47
CPSF7-202ENST00000394888 ATG101Q9BSB4 218 aa12.09□□□□□ -0.47
CPSF7-202ENST00000394888 CHD8Q9HCK8 2581 aa12.09□□□□□ -0.47
CPSF7-202ENST00000394888 ABCA1O95477 2261 aa12.09□□□□□ -0.47
CPSF7-202ENST00000394888 H3BRN7 92 aa12.09□□□□□ -0.47
CPSF7-202ENST00000394888 HYPMO75409 117 aa12.09□□□□□ -0.47
CPSF7-202ENST00000394888 C18orf32Q8TCD1 76 aa12.09□□□□□ -0.47
CPSF7-202ENST00000394888 NOL4LQ96MY1 436 aaPredicted RBP12.09□□□□□ -0.47
CPSF7-202ENST00000394888 TRAV8-1A0A0A6YYK1 113 aa12.08□□□□□ -0.48
CPSF7-202ENST00000394888 DEFA6Q01524 100 aa12.08□□□□□ -0.48
CPSF7-202ENST00000394888 EBI3Q14213 229 aa12.08□□□□□ -0.48
CPSF7-202ENST00000394888 EXOC3-AS1Q8N2X6 119 aa12.08□□□□□ -0.48
CPSF7-202ENST00000394888 HILPDAQ9Y5L2 63 aa12.08□□□□□ -0.48
CPSF7-202ENST00000394888 ZNF705GA8MUZ8 300 aaPredicted RBP12.08□□□□□ -0.48
CPSF7-202ENST00000394888 M0R1W7 72 aa12.08□□□□□ -0.48
CPSF7-202ENST00000394888 NBR2O15453 112 aa12.08□□□□□ -0.48
CPSF7-202ENST00000394888 PRB4P10163 310 aaPredicted RBP12.08□□□□□ -0.48
CPSF7-202ENST00000394888 PRTN3P24158 256 aa12.08□□□□□ -0.48
CPSF7-202ENST00000394888 FAM120AOSQ5T036 256 aa12.08□□□□□ -0.48
CPSF7-202ENST00000394888 LINC00469Q8N7U9 141 aa12.08□□□□□ -0.48
CPSF7-202ENST00000394888 TSKUQ8WUA8 353 aa12.08□□□□□ -0.48
CPSF7-202ENST00000394888 MS4A10Q96PG2 267 aa12.08□□□□□ -0.48
CPSF7-202ENST00000394888 SIRPDQ9H106 197 aa12.08□□□□□ -0.48
CPSF7-202ENST00000394888 OR2J3O76001 311 aa12.08□□□□□ -0.48
CPSF7-202ENST00000394888 CTRLP40313 264 aa12.08□□□□□ -0.48
CPSF7-202ENST00000394888 SIGLEC15Q6ZMC9 328 aa12.08□□□□□ -0.48
CPSF7-202ENST00000394888 ZNF469Q96JG9 3925 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-202ENST00000394888 FBN2P35556 2912 aa12.07□□□□□ -0.48
CPSF7-202ENST00000394888 MT-ND6P03923 174 aa12.07□□□□□ -0.48
CPSF7-202ENST00000394888 IQCJQ1A5X6 159 aa12.07□□□□□ -0.48
CPSF7-202ENST00000394888 TCF24Q7RTU0 167 aa12.07□□□□□ -0.48
CPSF7-202ENST00000394888 Q86TA4 180 aa12.07□□□□□ -0.48
CPSF7-202ENST00000394888 NAT8BQ9UHF3 227 aa12.07□□□□□ -0.48
CPSF7-202ENST00000394888 CRIP1P50238 77 aa12.07□□□□□ -0.48
CPSF7-202ENST00000394888 USF2Q15853 346 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-202ENST00000394888 RASL11AQ6T310 242 aa12.07□□□□□ -0.48
CPSF7-202ENST00000394888 SPATA12Q7Z6I5 190 aa12.07□□□□□ -0.48
CPSF7-202ENST00000394888 SHANK2-AS3Q9BTD1 123 aa12.07□□□□□ -0.48
CPSF7-202ENST00000394888 DPM3Q9P2X0 92 aa12.07□□□□□ -0.48
CPSF7-202ENST00000394888 KLF5Q13887 457 aaPredicted RBP12.07□□□□□ -0.48
CPSF7-202ENST00000394888 ASCL2Q99929 193 aa12.07□□□□□ -0.48
CPSF7-202ENST00000394888 HSPB9Q9BQS6 159 aa12.07□□□□□ -0.48
CPSF7-202ENST00000394888 HIGD1CA8MV81 97 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 SRIP30626 198 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 PAFAH1B2P68402 229 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 KLK9Q2XQG4 91 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 KCNS1Q96KK3 526 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 GPR82Q96P67 336 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 ZNF492Q9P255 531 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 KLK9Q9UKQ9 250 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 TRBV6-1A0A0K0K1D8 114 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 A0A1B0GV90 55 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 TSTD3H0UI37 97 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 IGHG4P01861 327 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 HTR1DP28221 377 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 VMO1Q7Z5L0 202 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 C5orf17Q8NAS9 161 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 TRBV19A0A075B6N1 114 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 SLC25A5P05141 298 aaKnown RBP12.06□□□□□ -0.48
CPSF7-202ENST00000394888 WDR73Q6P4I2 378 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 STXBP6Q8NFX7 210 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 C2orf88Q9BSF0 95 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 ALKBH7Q9BT30 221 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-202ENST00000394888 SSBP4Q9BWG4 385 aaPredicted RBP12.06□□□□□ -0.48
CPSF7-202ENST00000394888 S4R3C0 116 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 AKAP9Q99996 3911 aa12.06□□□□□ -0.48
CPSF7-202ENST00000394888 MMDQ15546 238 aa12.05□□□□□ -0.48
CPSF7-202ENST00000394888 C5orf64Q2M2E5 130 aa12.05□□□□□ -0.48
CPSF7-202ENST00000394888 FMC1Q96HJ9 113 aa12.05□□□□□ -0.48
CPSF7-202ENST00000394888 ZNF48Q96MX3 618 aaPredicted RBP12.05□□□□□ -0.48
CPSF7-202ENST00000394888 HIGD1AQ9Y241 93 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms