RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 THAP8Q8NA92 274 aa11.23□□□□□ -0.61
USP49-203ENST00000394253 VN1R4Q7Z5H5 301 aa11.23□□□□□ -0.61
USP49-203ENST00000394253 PAPPA2Q9BXP8 1791 aa11.23□□□□□ -0.61
USP49-203ENST00000394253 hDV102S1A0JD36 115 aa11.23□□□□□ -0.61
USP49-203ENST00000394253 K7EP13 123 aa11.23□□□□□ -0.61
USP49-203ENST00000394253 TMEM196Q5HYL7 178 aa11.23□□□□□ -0.61
USP49-203ENST00000394253 ZNF826PQ6ZT77 177 aa11.23□□□□□ -0.61
USP49-203ENST00000394253 C8orf46Q8TAG6 207 aa11.23□□□□□ -0.61
USP49-203ENST00000394253 IGHMP01871 453 aa11.23□□□□□ -0.61
USP49-203ENST00000394253 FGF11Q92914 225 aa11.23□□□□□ -0.61
USP49-203ENST00000394253 CRIM1Q9NZV1 1036 aa11.23□□□□□ -0.61
USP49-203ENST00000394253 LHFPL6Q9Y693 200 aa11.23□□□□□ -0.61
USP49-203ENST00000394253 MP68P56378 58 aa11.22□□□□□ -0.61
USP49-203ENST00000394253 GNG5P63218 68 aa11.22□□□□□ -0.61
USP49-203ENST00000394253 NPIPB5A8MRT5 1133 aa11.22□□□□□ -0.61
USP49-203ENST00000394253 MSGN1A6NI15 193 aa11.22□□□□□ -0.61
USP49-203ENST00000394253 TM4SF4P48230 202 aa11.22□□□□□ -0.61
USP49-203ENST00000394253 ACP7Q6ZNF0 438 aa11.22□□□□□ -0.61
USP49-203ENST00000394253 KLHDC3Q9BQ90 382 aa11.22□□□□□ -0.61
USP49-203ENST00000394253 SHISA9B4DS77 424 aa11.22□□□□□ -0.61
USP49-203ENST00000394253 VDAC2P45880 294 aaPredicted RBP11.22□□□□□ -0.61
USP49-203ENST00000394253 KCNK17Q96T54 332 aa11.22□□□□□ -0.61
USP49-203ENST00000394253 MGAMO43451 1857 aa11.22□□□□□ -0.61
USP49-203ENST00000394253 IGHV3-23P01764 117 aa11.22□□□□□ -0.61
USP49-203ENST00000394253 HLA-DMBP28068 263 aa11.22□□□□□ -0.61
USP49-203ENST00000394253 SYNJ2BPP57105 145 aa11.22□□□□□ -0.61
USP49-203ENST00000394253 A0A1B0GW64 132 aa11.21□□□□□ -0.61
USP49-203ENST00000394253 PSG8Q9UQ74 426 aa11.21□□□□□ -0.61
USP49-203ENST00000394253 TM2D1Q9BX74 207 aa11.21□□□□□ -0.61
USP49-203ENST00000394253 ATOX1O00244 68 aa11.21□□□□□ -0.61
USP49-203ENST00000394253 WFDC9Q8NEX5 89 aa11.21□□□□□ -0.61
USP49-203ENST00000394253 TMEM243Q9BU79 118 aa11.21□□□□□ -0.61
USP49-203ENST00000394253 CEP192Q8TEP8 1941 aa11.21□□□□□ -0.61
USP49-203ENST00000394253 TCF15Q12870 199 aa11.21□□□□□ -0.61
USP49-203ENST00000394253 EFNB3Q15768 340 aa11.21□□□□□ -0.61
USP49-203ENST00000394253 NBR2O15453 112 aa11.21□□□□□ -0.62
USP49-203ENST00000394253 AMN1Q8IY45 258 aa11.21□□□□□ -0.62
USP49-203ENST00000394253 GLMPQ8WWB7 406 aa11.21□□□□□ -0.62
USP49-203ENST00000394253 A0A0J9YW62 118 aa11.21□□□□□ -0.62
USP49-203ENST00000394253 NOVP48745 357 aa11.21□□□□□ -0.62
USP49-203ENST00000394253 C8orf82Q6P1X6 216 aaPredicted RBP11.21□□□□□ -0.62
USP49-203ENST00000394253 PILRAQ9UKJ1 303 aa11.21□□□□□ -0.62
USP49-203ENST00000394253 H3BQ85 93 aa11.21□□□□□ -0.62
USP49-203ENST00000394253 IGFBP3P17936 291 aaPredicted RBP11.21□□□□□ -0.62
USP49-203ENST00000394253 C1orf210Q8IVY1 113 aa11.21□□□□□ -0.62
USP49-203ENST00000394253 SCRT1Q9BWW7 348 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 TTC28Q96AY4 2481 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 TRAV12-1A0A0B4J245 112 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 TRAV1-1A0A0B4J248 108 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 TRAV25A0A0B4J276 109 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 SMIM20Q8N5G0 67 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 SS18L2Q9UHA2 77 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 TANC1Q9C0D5 1861 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 RFLNBQ8N5W9 214 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 ALPK3Q96L96 1907 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 IGHV5-10-1A0A0J9YXX1 117 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 RCHY1Q96PM5 261 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 CRLF1O75462 422 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 SLC25A47Q6Q0C1 308 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 FAM181AQ8N9Y4 354 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 OCC1Q8TAD7 63 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 FAM166AQ6J272 317 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 ZNF525Q8N782 197 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 F6UB75 175 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 IMMP1LQ96LU5 166 aa11.2□□□□□ -0.62
USP49-203ENST00000394253 A8MWP6 167 aa11.19□□□□□ -0.62
USP49-203ENST00000394253 MPZP25189 248 aa11.19□□□□□ -0.62
USP49-203ENST00000394253 ZNF561-AS1K7EIQ3 104 aa11.19□□□□□ -0.62
USP49-203ENST00000394253 ATRAIDQ6UW56 229 aa11.19□□□□□ -0.62
USP49-203ENST00000394253 LSM4Q9Y4Z0 139 aaKnown RBP11.19□□□□□ -0.62
USP49-203ENST00000394253 HOXB3P14651 431 aaPredicted RBP11.19□□□□□ -0.62
USP49-203ENST00000394253 ZPLD1Q8TCW7 415 aa11.19□□□□□ -0.62
USP49-203ENST00000394253 AGMATQ9BSE5 352 aa11.19□□□□□ -0.62
USP49-203ENST00000394253 CSTL1Q9H114 145 aa11.19□□□□□ -0.62
USP49-203ENST00000394253 LINC00312Q9Y6C7 94 aa11.19□□□□□ -0.62
USP49-203ENST00000394253 LTBP4Q8N2S1 1624 aa11.19□□□□□ -0.62
USP49-203ENST00000394253 C1orf159Q96HA4 380 aa11.19□□□□□ -0.62
USP49-203ENST00000394253 IGHV1-24A0A0C4DH33 117 aa11.19□□□□□ -0.62
USP49-203ENST00000394253 Q5BKY6 102 aa11.19□□□□□ -0.62
USP49-203ENST00000394253 SPXQ9BT56 116 aa11.19□□□□□ -0.62
USP49-203ENST00000394253 FGF6P10767 208 aa11.19□□□□□ -0.62
USP49-203ENST00000394253 FUSP35637 526 aaKnown RBP eCLIP11.19□□□□□ -0.62
USP49-203ENST00000394253 DEFB123Q8N688 67 aa11.19□□□□□ -0.62
USP49-203ENST00000394253 C8orf31Q8N9H6 132 aa11.19□□□□□ -0.62
USP49-203ENST00000394253 DEFB124Q8NES8 71 aa11.19□□□□□ -0.62
USP49-203ENST00000394253 TRBV5-3A0A0A0MS03 114 aa11.18□□□□□ -0.62
USP49-203ENST00000394253 BRK1Q8WUW1 75 aa11.18□□□□□ -0.62
USP49-203ENST00000394253 FAM231BA6NCW3 169 aa11.18□□□□□ -0.62
USP49-203ENST00000394253 F8VVB4 439 aa11.18□□□□□ -0.62
USP49-203ENST00000394253 F8VWA3 439 aa11.18□□□□□ -0.62
USP49-203ENST00000394253 OR11H6Q8NGC7 330 aa11.18□□□□□ -0.62
USP49-203ENST00000394253 TMEM141Q96I45 108 aa11.18□□□□□ -0.62
USP49-203ENST00000394253 TMEM14DPA8MWL7 114 aa11.18□□□□□ -0.62
USP49-203ENST00000394253 K7EP34 96 aa11.18□□□□□ -0.62
USP49-203ENST00000394253 ZNF876PQ49A33 203 aa11.18□□□□□ -0.62
USP49-203ENST00000394253 ZC2HC1BQ5TFG8 222 aa11.18□□□□□ -0.62
USP49-203ENST00000394253 PKIGQ9Y2B9 76 aa11.18□□□□□ -0.62
USP49-203ENST00000394253 B5MCH6 92 aa11.18□□□□□ -0.62
USP49-203ENST00000394253 NUP35Q8NFH5 326 aa11.18□□□□□ -0.62
USP49-203ENST00000394253 GFRA4Q9GZZ7 299 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 749.2 ms