RNA–Protein interactions for RNA: ENST00000394224.3

SIPA1-201, Transcript of signal-induced proliferation-associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIPA1, Length 3,628 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-201ENST00000394224 EPDR1Q9UM22 224 aa13.48□□□□□ -0.25
SIPA1-201ENST00000394224 SPTBN4Q9H254 2564 aa13.48□□□□□ -0.25
SIPA1-201ENST00000394224 KIR2DS2P43631 304 aa13.47□□□□□ -0.25
SIPA1-201ENST00000394224 ZNF714Q96N38 554 aa13.47□□□□□ -0.25
SIPA1-201ENST00000394224 DYNLRB1Q9NP97 96 aa13.47□□□□□ -0.25
SIPA1-201ENST00000394224 DOPEY2Q9Y3R5 2298 aa13.47□□□□□ -0.25
SIPA1-201ENST00000394224 C22orf46C9J442 243 aa13.47□□□□□ -0.25
SIPA1-201ENST00000394224 SP9P0CG40 484 aa13.47□□□□□ -0.25
SIPA1-201ENST00000394224 PRSS3P2Q8NHM4 247 aa13.47□□□□□ -0.25
SIPA1-201ENST00000394224 Q9H3A6 140 aa13.47□□□□□ -0.25
SIPA1-201ENST00000394224 SMKR1H3BMG3 65 aa13.47□□□□□ -0.25
SIPA1-201ENST00000394224 CHRDL1Q9BU40 450 aa13.47□□□□□ -0.25
SIPA1-201ENST00000394224 COX11Q9Y6N1 276 aa13.47□□□□□ -0.25
SIPA1-201ENST00000394224 IGHV1-24A0A0C4DH33 117 aa13.46□□□□□ -0.25
SIPA1-201ENST00000394224 HBBP68871 147 aa13.46□□□□□ -0.25
SIPA1-201ENST00000394224 MZT1Q08AG7 82 aa13.46□□□□□ -0.25
SIPA1-201ENST00000394224 HES1Q14469 280 aa13.46□□□□□ -0.25
SIPA1-201ENST00000394224 H0YJW9 148 aa13.46□□□□□ -0.26
SIPA1-201ENST00000394224 PPIFP30405 207 aaKnown RBP13.46□□□□□ -0.26
SIPA1-201ENST00000394224 RIPPLY3P57055 190 aa13.46□□□□□ -0.26
SIPA1-201ENST00000394224 FXYD5Q96DB9 178 aa13.46□□□□□ -0.26
SIPA1-201ENST00000394224 TRBV9A0A0B4J1U6 114 aa13.45□□□□□ -0.26
SIPA1-201ENST00000394224 CGB1A6NKQ9 187 aa13.45□□□□□ -0.26
SIPA1-201ENST00000394224 PTPRBP23467 1997 aa13.45□□□□□ -0.26
SIPA1-201ENST00000394224 MBNL2Q5VZF2 373 aaKnown RBP13.45□□□□□ -0.26
SIPA1-201ENST00000394224 BCL6BQ8N143 479 aaPredicted RBP13.45□□□□□ -0.26
SIPA1-201ENST00000394224 ARMS2P0C7Q2 107 aa13.45□□□□□ -0.26
SIPA1-201ENST00000394224 GLRXP35754 106 aa13.45□□□□□ -0.26
SIPA1-201ENST00000394224 C22orf15Q8WYQ4 148 aa13.45□□□□□ -0.26
SIPA1-201ENST00000394224 GRAMD2BQ96HH9 432 aa13.45□□□□□ -0.26
SIPA1-201ENST00000394224 ZNF891A8MT65 544 aaPredicted RBP13.45□□□□□ -0.26
SIPA1-201ENST00000394224 APOHP02749 345 aaPredicted RBP13.45□□□□□ -0.26
SIPA1-201ENST00000394224 CFHR2P36980 270 aa13.45□□□□□ -0.26
SIPA1-201ENST00000394224 OR5AL1P0C617 328 aa13.44□□□□□ -0.26
SIPA1-201ENST00000394224 TNFRSF1AP19438 455 aa13.44□□□□□ -0.26
SIPA1-201ENST00000394224 URB1-AS1Q96HZ7 61 aa13.44□□□□□ -0.26
SIPA1-201ENST00000394224 PLSCR4Q9NRQ2 329 aa13.44□□□□□ -0.26
SIPA1-201ENST00000394224 LINC00614P0C842 121 aa13.44□□□□□ -0.26
SIPA1-201ENST00000394224 UBE2V1Q13404 147 aa13.44□□□□□ -0.26
SIPA1-201ENST00000394224 SLC25A48Q6ZT89 311 aaKnown RBP13.44□□□□□ -0.26
SIPA1-201ENST00000394224 C2orf70A6NJV1 201 aa13.44□□□□□ -0.26
SIPA1-201ENST00000394224 J3QW42 95 aa13.44□□□□□ -0.26
SIPA1-201ENST00000394224 NCR2O95944 276 aa13.44□□□□□ -0.26
SIPA1-201ENST00000394224 NHLH1Q02575 133 aa13.44□□□□□ -0.26
SIPA1-201ENST00000394224 RPP21Q9H633 154 aaKnown RBP13.44□□□□□ -0.26
SIPA1-201ENST00000394224 NDUFA4L2Q9NRX3 87 aa13.44□□□□□ -0.26
SIPA1-201ENST00000394224 SORL1Q92673 2214 aa13.44□□□□□ -0.26
SIPA1-201ENST00000394224 TCRBV4S1A1TA0A5B7 111 aa13.43□□□□□ -0.26
SIPA1-201ENST00000394224 J3KRW8 73 aa13.43□□□□□ -0.26
SIPA1-201ENST00000394224 C2orf83Q53S99 150 aa13.43□□□□□ -0.26
SIPA1-201ENST00000394224 OR4C13Q8NGP0 309 aa13.43□□□□□ -0.26
SIPA1-201ENST00000394224 MBD6Q96DN6 1003 aa13.43□□□□□ -0.26
SIPA1-201ENST00000394224 IGHV3-49A0A0A0MS15 119 aa13.43□□□□□ -0.26
SIPA1-201ENST00000394224 IGHV3-66A0A0C4DH42 116 aa13.43□□□□□ -0.26
SIPA1-201ENST00000394224 NKX6-3A6NJ46 265 aa13.43□□□□□ -0.26
SIPA1-201ENST00000394224 CD40P25942 277 aa13.43□□□□□ -0.26
SIPA1-201ENST00000394224 NMUP48645 174 aa13.43□□□□□ -0.26
SIPA1-201ENST00000394224 ADTRPQ96IZ2 230 aa13.43□□□□□ -0.26
SIPA1-201ENST00000394224 GPR82Q96P67 336 aa13.43□□□□□ -0.26
SIPA1-201ENST00000394224 TTTY13Q9BZ97 58 aa13.43□□□□□ -0.26
SIPA1-201ENST00000394224 LOC105371242A0A075B767 164 aa13.43□□□□□ -0.26
SIPA1-201ENST00000394224 SYS1-DBNDD2H3BUS1 97 aa13.43□□□□□ -0.26
SIPA1-201ENST00000394224 LOXL1Q08397 574 aaPredicted RBP13.43□□□□□ -0.26
SIPA1-201ENST00000394224 SETD2Q9BYW2 2564 aaPredicted RBP13.42□□□□□ -0.26
SIPA1-201ENST00000394224 NDUFB3O43676 98 aa13.42□□□□□ -0.26
SIPA1-201ENST00000394224 SUB1P53999 127 aaKnown RBP eCLIP13.42□□□□□ -0.26
SIPA1-201ENST00000394224 BSPH1Q075Z2 132 aa13.42□□□□□ -0.26
SIPA1-201ENST00000394224 SLC25A34Q6PIV7 304 aa13.42□□□□□ -0.26
SIPA1-201ENST00000394224 TNRC6BQ9UPQ9 1833 aaKnown RBP13.42□□□□□ -0.26
SIPA1-201ENST00000394224 CSPG4Q6UVK1 2322 aa13.42□□□□□ -0.26
SIPA1-201ENST00000394224 IGKV1D-37A0A075B6S9 117 aa13.42□□□□□ -0.26
SIPA1-201ENST00000394224 IGLV1-44P01699 117 aa13.42□□□□□ -0.26
SIPA1-201ENST00000394224 ESDP10768 282 aa13.42□□□□□ -0.26
SIPA1-201ENST00000394224 ZADH2Q8N4Q0 377 aa13.42□□□□□ -0.26
SIPA1-201ENST00000394224 A8MWL6 223 aa13.41□□□□□ -0.26
SIPA1-201ENST00000394224 FCGR2BP31994 310 aaPredicted RBP13.41□□□□□ -0.26
SIPA1-201ENST00000394224 ARF6P62330 175 aa13.41□□□□□ -0.26
SIPA1-201ENST00000394224 ZNF788Q6ZQV5 615 aa13.41□□□□□ -0.26
SIPA1-201ENST00000394224 Q8TAT8 98 aa13.41□□□□□ -0.26
SIPA1-201ENST00000394224 MAP1LC3CQ9BXW4 147 aa13.41□□□□□ -0.26
SIPA1-201ENST00000394224 FAM215AQ9Y5M1 114 aa13.41□□□□□ -0.26
SIPA1-201ENST00000394224 FCN3O75636 299 aa13.41□□□□□ -0.26
SIPA1-201ENST00000394224 CGB3P0DN86 165 aa13.41□□□□□ -0.26
SIPA1-201ENST00000394224 CGB7P0DN87 165 aa13.41□□□□□ -0.26
SIPA1-201ENST00000394224 PERPQ96FX8 193 aa13.41□□□□□ -0.26
SIPA1-201ENST00000394224 GAL3ST2Q9H3Q3 398 aa13.41□□□□□ -0.26
SIPA1-201ENST00000394224 PTPRQQ9UMZ3 2332 aa13.41□□□□□ -0.26
SIPA1-201ENST00000394224 TMEM213A2RRL7 107 aa13.4□□□□□ -0.26
SIPA1-201ENST00000394224 GAGE1Q13065 139 aa13.4□□□□□ -0.26
SIPA1-201ENST00000394224 FA2HQ7L5A8 372 aa13.4□□□□□ -0.26
SIPA1-201ENST00000394224 TMEM75Q8N9X5 138 aa13.4□□□□□ -0.26
SIPA1-201ENST00000394224 INSIG2Q9Y5U4 225 aa13.4□□□□□ -0.26
SIPA1-201ENST00000394224 PPIAL4EA0A075B759 164 aa13.4□□□□□ -0.26
SIPA1-201ENST00000394224 PPIAL4FP0DN26 164 aa13.4□□□□□ -0.26
SIPA1-201ENST00000394224 TMEM249Q2WGJ8 235 aa13.4□□□□□ -0.26
SIPA1-201ENST00000394224 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.4□□□□□ -0.26
SIPA1-201ENST00000394224 FTH1P19P0C7X4 201 aa13.4□□□□□ -0.26
SIPA1-201ENST00000394224 RPL27AP46776 148 aaKnown RBP13.4□□□□□ -0.26
SIPA1-201ENST00000394224 VMA21Q3ZAQ7 101 aa13.4□□□□□ -0.26
SIPA1-201ENST00000394224 TRAV9-1A0A075B6T8 112 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms