RNA–Protein interactions for RNA: ENST00000393436.9

RAP1B-204, Transcript of RAP1B, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1B, Length 2,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-204ENST00000393436 BTF3L4Q96K17 158 aa16.52■□□□□ 0.24
RAP1B-204ENST00000393436 TCEAL7Q9BRU2 100 aa16.52■□□□□ 0.24
RAP1B-204ENST00000393436 RPH3ALQ9UNE2 315 aa16.52■□□□□ 0.24
RAP1B-204ENST00000393436 RPEL1Q2QD12 228 aa16.52■□□□□ 0.23
RAP1B-204ENST00000393436 Q56UQ5 140 aa16.52■□□□□ 0.23
RAP1B-204ENST00000393436 HIST3H2BBQ8N257 126 aa16.52■□□□□ 0.23
RAP1B-204ENST00000393436 ZNF48Q96MX3 618 aaPredicted RBP16.52■□□□□ 0.23
RAP1B-204ENST00000393436 SHANK2-AS3Q9BTD1 123 aa16.52■□□□□ 0.23
RAP1B-204ENST00000393436 Q9H3A6 140 aa16.52■□□□□ 0.23
RAP1B-204ENST00000393436 OSTCQ9NRP0 149 aa16.52■□□□□ 0.23
RAP1B-204ENST00000393436 ZNF586Q9NXT0 402 aa16.52■□□□□ 0.23
RAP1B-204ENST00000393436 C21orf62Q9NYP8 219 aa16.52■□□□□ 0.23
RAP1B-204ENST00000393436 TMEM14CQ9P0S9 112 aa16.52■□□□□ 0.23
RAP1B-204ENST00000393436 TRAV30A0A087WSZ9 112 aa16.51■□□□□ 0.23
RAP1B-204ENST00000393436 WI2-2373I1.2A0A1W2PRP0 233 aa16.51■□□□□ 0.23
RAP1B-204ENST00000393436 SH2D7A6NKC9 451 aaPredicted RBP16.51■□□□□ 0.23
RAP1B-204ENST00000393436 H3BRN7 92 aa16.51■□□□□ 0.23
RAP1B-204ENST00000393436 HIST1H1BP16401 226 aaKnown RBP16.51■□□□□ 0.23
RAP1B-204ENST00000393436 YPEL3P61236 119 aaPredicted RBP16.51■□□□□ 0.23
RAP1B-204ENST00000393436 GPR61Q9BZJ8 451 aa16.51■□□□□ 0.23
RAP1B-204ENST00000393436 IGHV1-69DA0A0B4J2H0 117 aa16.5■□□□□ 0.23
RAP1B-204ENST00000393436 ATP6V0E1O15342 81 aa16.5■□□□□ 0.23
RAP1B-204ENST00000393436 IGHV1-69P01742 117 aa16.5■□□□□ 0.23
RAP1B-204ENST00000393436 IBA57Q5T440 356 aaKnown RBP16.5■□□□□ 0.23
RAP1B-204ENST00000393436 BRD3OSQ6XYD6 125 aa16.5■□□□□ 0.23
RAP1B-204ENST00000393436 BCL6BQ8N143 479 aaPredicted RBP16.5■□□□□ 0.23
RAP1B-204ENST00000393436 THYN1Q9P016 225 aa16.5■□□□□ 0.23
RAP1B-204ENST00000393436 SPG11Q96JI7 2443 aa16.5■□□□□ 0.23
RAP1B-204ENST00000393436 TRAV40A0A0B4J280 105 aa16.5■□□□□ 0.23
RAP1B-204ENST00000393436 SMIM6P0DI80 62 aa16.5■□□□□ 0.23
RAP1B-204ENST00000393436 ECSCRQ19T08 205 aa16.5■□□□□ 0.23
RAP1B-204ENST00000393436 BAGE2Q86Y30 109 aa16.5■□□□□ 0.23
RAP1B-204ENST00000393436 SGK494Q96LW2 274 aa16.5■□□□□ 0.23
RAP1B-204ENST00000393436 TRAPPC1Q9Y5R8 145 aa16.5■□□□□ 0.23
RAP1B-204ENST00000393436 S100A9P06702 114 aaKnown RBP16.49■□□□□ 0.23
RAP1B-204ENST00000393436 HIST1H1EP10412 219 aaKnown RBP16.49■□□□□ 0.23
RAP1B-204ENST00000393436 USF2Q15853 346 aaPredicted RBP16.49■□□□□ 0.23
RAP1B-204ENST00000393436 TMEM183BQ1AE95 376 aa16.49■□□□□ 0.23
RAP1B-204ENST00000393436 UNQ5815/PRO19632Q6UWF5 114 aa16.49■□□□□ 0.23
RAP1B-204ENST00000393436 TMUB1Q9BVT8 246 aa16.49■□□□□ 0.23
RAP1B-204ENST00000393436 FBXL7Q9UJT9 491 aa16.49■□□□□ 0.23
RAP1B-204ENST00000393436 PITPNC1Q9UKF7 332 aa16.49■□□□□ 0.23
RAP1B-204ENST00000393436 ZNF462Q96JM2 2506 aa16.49■□□□□ 0.23
RAP1B-204ENST00000393436 TRAV9-1A0A075B6T8 112 aa16.48■□□□□ 0.23
RAP1B-204ENST00000393436 PCP4L1A6NKN8 68 aa16.48■□□□□ 0.23
RAP1B-204ENST00000393436 LINC01548A6NM66 108 aa16.48■□□□□ 0.23
RAP1B-204ENST00000393436 ZNF843Q8N446 348 aa16.48■□□□□ 0.23
RAP1B-204ENST00000393436 C5orf17Q8NAS9 161 aa16.48■□□□□ 0.23
RAP1B-204ENST00000393436 FAM110DQ8TAY7 271 aaPredicted RBP16.48■□□□□ 0.23
RAP1B-204ENST00000393436 TMEM68Q96MH6 324 aa16.48■□□□□ 0.23
RAP1B-204ENST00000393436 OR2T8A6NH00 312 aa16.48■□□□□ 0.23
RAP1B-204ENST00000393436 UBE2G1P62253 170 aa16.48■□□□□ 0.23
RAP1B-204ENST00000393436 TMEM219Q86XT9 240 aa16.48■□□□□ 0.23
RAP1B-204ENST00000393436 OR8I2Q8N0Y5 310 aa16.48■□□□□ 0.23
RAP1B-204ENST00000393436 ATG101Q9BSB4 218 aa16.48■□□□□ 0.23
RAP1B-204ENST00000393436 GAR1Q9NY12 217 aaKnown RBP16.48■□□□□ 0.23
RAP1B-204ENST00000393436 FCGR2BP31994 310 aaPredicted RBP16.47■□□□□ 0.23
RAP1B-204ENST00000393436 C5orf56Q8N8D9 126 aa16.47■□□□□ 0.23
RAP1B-204ENST00000393436 KLF12Q9Y4X4 402 aa16.47■□□□□ 0.23
RAP1B-204ENST00000393436 ZFHX3Q15911 3703 aa16.47■□□□□ 0.23
RAP1B-204ENST00000393436 XKRY2A2RUG3 117 aa16.46■□□□□ 0.23
RAP1B-204ENST00000393436 IGHV4-38-2P0DP08 117 aa16.46■□□□□ 0.23
RAP1B-204ENST00000393436 C17orf77Q96MU5 243 aa16.46■□□□□ 0.23
RAP1B-204ENST00000393436 OTORQ9NRC9 128 aa16.46■□□□□ 0.23
RAP1B-204ENST00000393436 SERTAD4Q9NUC0 356 aa16.46■□□□□ 0.23
RAP1B-204ENST00000393436 TCRAP04437 139 aa16.46■□□□□ 0.23
RAP1B-204ENST00000393436 FRMD6-AS1P0C7T7 363 aa16.46■□□□□ 0.23
RAP1B-204ENST00000393436 SRSF1Q07955 248 aaKnown RBP eCLIP16.46■□□□□ 0.23
RAP1B-204ENST00000393436 BPIFA4PQ86YQ2 179 aa16.46■□□□□ 0.23
RAP1B-204ENST00000393436 EXOC3-AS1Q8N2X6 119 aa16.46■□□□□ 0.23
RAP1B-204ENST00000393436 CRYBG3Q68DQ2 2970 aa16.45■□□□□ 0.22
RAP1B-204ENST00000393436 G3V318 75 aa16.45■□□□□ 0.22
RAP1B-204ENST00000393436 S100A2P29034 98 aa16.45■□□□□ 0.22
RAP1B-204ENST00000393436 TCL1AP56279 114 aa16.45■□□□□ 0.22
RAP1B-204ENST00000393436 PIFOQ8TCI5 191 aa16.45■□□□□ 0.22
RAP1B-204ENST00000393436 ZNF705GA8MUZ8 300 aaPredicted RBP16.45■□□□□ 0.22
RAP1B-204ENST00000393436 MRPS12O15235 138 aaKnown RBP16.45■□□□□ 0.22
RAP1B-204ENST00000393436 CA1P00915 261 aaPredicted RBP16.45■□□□□ 0.22
RAP1B-204ENST00000393436 CTSGP08311 255 aa16.45■□□□□ 0.22
RAP1B-204ENST00000393436 IGLC2P0DOY2 106 aa16.45■□□□□ 0.22
RAP1B-204ENST00000393436 CBLN1P23435 193 aa16.45■□□□□ 0.22
RAP1B-204ENST00000393436 TMEM183AQ8IXX5 376 aa16.45■□□□□ 0.22
RAP1B-204ENST00000393436 CHRDL1Q9BU40 450 aa16.45■□□□□ 0.22
RAP1B-204ENST00000393436 C7orf69Q9H7B7 122 aa16.45■□□□□ 0.22
RAP1B-204ENST00000393436 SOX21Q9Y651 276 aaPredicted RBP16.45■□□□□ 0.22
RAP1B-204ENST00000393436 TRBV19A0A075B6N1 114 aa16.44■□□□□ 0.22
RAP1B-204ENST00000393436 MSMBP08118 114 aa16.44■□□□□ 0.22
RAP1B-204ENST00000393436 PRR27Q6MZM9 219 aa16.44■□□□□ 0.22
RAP1B-204ENST00000393436 OR4F17Q8NGA8 305 aa16.44■□□□□ 0.22
RAP1B-204ENST00000393436 SPINK4O60575 86 aa16.43■□□□□ 0.22
RAP1B-204ENST00000393436 C15orf32Q32M92 178 aa16.43■□□□□ 0.22
RAP1B-204ENST00000393436 OR10D4PQ8NGN7 298 aa16.43■□□□□ 0.22
RAP1B-204ENST00000393436 FMC1Q96HJ9 113 aa16.43■□□□□ 0.22
RAP1B-204ENST00000393436 CELSR1Q9NYQ6 3014 aa16.43■□□□□ 0.22
RAP1B-204ENST00000393436 SMIM27A0A1W2PRY6 76 aa16.43■□□□□ 0.22
RAP1B-204ENST00000393436 FABP4P15090 132 aa16.43■□□□□ 0.22
RAP1B-204ENST00000393436 ADMP35318 185 aa16.43■□□□□ 0.22
RAP1B-204ENST00000393436 COA6Q5JTJ3 125 aaKnown RBP16.43■□□□□ 0.22
RAP1B-204ENST00000393436 FAM231DQ6ZW35 169 aa16.43■□□□□ 0.22
RAP1B-204ENST00000393436 NUDT10Q8NFP7 164 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms