RNA–Protein interactions for RNA: ENST00000392597.5

PTPN11-202, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

TSL 1 (best) BASIC

Gene PTPN11, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-202ENST00000392597 TXN2Q99757 166 aa15.76■□□□□ 0.11
PTPN11-202ENST00000392597 SHANK2-AS3Q9BTD1 123 aa15.76■□□□□ 0.11
PTPN11-202ENST00000392597 TRAV40A0A0B4J280 105 aa15.75■□□□□ 0.11
PTPN11-202ENST00000392597 F8W735 103 aaPredicted RBP15.75■□□□□ 0.11
PTPN11-202ENST00000392597 PHOX2AO14813 284 aa15.75■□□□□ 0.11
PTPN11-202ENST00000392597 HNF1AP20823 631 aa15.75■□□□□ 0.11
PTPN11-202ENST00000392597 C5orf56Q8N8D9 126 aa15.75■□□□□ 0.11
PTPN11-202ENST00000392597 VN1R17PQ8TDU5 208 aa15.75■□□□□ 0.11
PTPN11-202ENST00000392597 RNF125Q96EQ8 232 aa15.75■□□□□ 0.11
PTPN11-202ENST00000392597 RNF24Q9Y225 148 aa15.75■□□□□ 0.11
PTPN11-202ENST00000392597 TRAV9-1A0A075B6T8 112 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 B4DSR2 109 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 H3BRN7 92 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 HIST1H2BKO60814 126 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 NDUFB8O95169 186 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 HIST1H2BJP06899 126 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 HIST1H2BOP23527 126 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 GATA3P23771 443 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 HIST1H2BBP33778 126 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 HIST1H2BDP58876 126 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 HIST1H2BCP62807 126 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 HIST2H2BEQ16778 126 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 HIST2H2BFQ5QNW6 126 aaPredicted RBP15.74■□□□□ 0.11
PTPN11-202ENST00000392597 ZNF600Q6ZNG1 722 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 HIST1H2BHQ93079 126 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 HIST1H2BNQ99877 126 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 HIST1H2BMQ99879 126 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 MOB4Q9Y3A3 225 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 GCGP01275 180 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 HIST1H1EP10412 219 aaKnown RBP15.74■□□□□ 0.11
PTPN11-202ENST00000392597 RANP62826 216 aaKnown RBP15.74■□□□□ 0.11
PTPN11-202ENST00000392597 FABP9Q0Z7S8 132 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 EPDR1Q9UM22 224 aa15.74■□□□□ 0.11
PTPN11-202ENST00000392597 ATP6V0E1O15342 81 aa15.73■□□□□ 0.11
PTPN11-202ENST00000392597 OR2J3O76001 311 aa15.73■□□□□ 0.11
PTPN11-202ENST00000392597 IGLV2-8P01709 118 aa15.73■□□□□ 0.11
PTPN11-202ENST00000392597 AKR1D1P51857 326 aa15.73■□□□□ 0.11
PTPN11-202ENST00000392597 Q56UQ5 140 aa15.73■□□□□ 0.11
PTPN11-202ENST00000392597 LEMD1Q68G75 181 aa15.73■□□□□ 0.11
PTPN11-202ENST00000392597 UNQ5815/PRO19632Q6UWF5 114 aa15.73■□□□□ 0.11
PTPN11-202ENST00000392597 BLNKQ8WV28 456 aa15.73■□□□□ 0.11
PTPN11-202ENST00000392597 TMUB1Q9BVT8 246 aa15.73■□□□□ 0.11
PTPN11-202ENST00000392597 OSTCQ9NRP0 149 aa15.73■□□□□ 0.11
PTPN11-202ENST00000392597 FBXL7Q9UJT9 491 aa15.73■□□□□ 0.11
PTPN11-202ENST00000392597 VPS13CQ709C8 3753 aa15.73■□□□□ 0.11
PTPN11-202ENST00000392597 IL4P05112 153 aa15.72■□□□□ 0.11
PTPN11-202ENST00000392597 C5orf17Q8NAS9 161 aa15.72■□□□□ 0.11
PTPN11-202ENST00000392597 C7orf69Q9H7B7 122 aa15.72■□□□□ 0.11
PTPN11-202ENST00000392597 IL36BQ9NZH7 164 aa15.72■□□□□ 0.11
PTPN11-202ENST00000392597 TRAV20A0A0B4J274 112 aa15.71■□□□□ 0.11
PTPN11-202ENST00000392597 PGPA6NDG6 321 aa15.71■□□□□ 0.11
PTPN11-202ENST00000392597 ISLRO14498 428 aa15.71■□□□□ 0.11
PTPN11-202ENST00000392597 SLC25A5P05141 298 aaKnown RBP15.71■□□□□ 0.11
PTPN11-202ENST00000392597 S100A9P06702 114 aaKnown RBP15.71■□□□□ 0.11
PTPN11-202ENST00000392597 ERVFC1-1P60608 527 aa15.71■□□□□ 0.11
PTPN11-202ENST00000392597 CLEC12BQ2HXU8 276 aa15.71■□□□□ 0.11
PTPN11-202ENST00000392597 BPIFA4PQ86YQ2 179 aa15.71■□□□□ 0.11
PTPN11-202ENST00000392597 PIFOQ8TCI5 191 aa15.71■□□□□ 0.11
PTPN11-202ENST00000392597 FRZBQ92765 325 aa15.71■□□□□ 0.11
PTPN11-202ENST00000392597 BEX4Q9NWD9 120 aaPredicted RBP15.71■□□□□ 0.11
PTPN11-202ENST00000392597 IGHV3OR16-10A0A075B7F0 116 aa15.71■□□□□ 0.11
PTPN11-202ENST00000392597 TMEM183BQ1AE95 376 aa15.71■□□□□ 0.11
PTPN11-202ENST00000392597 BRD3OSQ6XYD6 125 aa15.71■□□□□ 0.11
PTPN11-202ENST00000392597 LINC00518Q8N0U6 118 aa15.71■□□□□ 0.11
PTPN11-202ENST00000392597 MBD6Q96DN6 1003 aa15.71■□□□□ 0.11
PTPN11-202ENST00000392597 SMIM12Q96EX1 92 aa15.71■□□□□ 0.11
PTPN11-202ENST00000392597 KLF12Q9Y4X4 402 aa15.71■□□□□ 0.11
PTPN11-202ENST00000392597 TRBV9A0A0B4J1U6 114 aa15.7■□□□□ 0.1
PTPN11-202ENST00000392597 A0A0U1RQK1 487 aa15.7■□□□□ 0.1
PTPN11-202ENST00000392597 TRGC1P0CF51 173 aa15.7■□□□□ 0.1
PTPN11-202ENST00000392597 IGHV4-38-2P0DP08 117 aa15.7■□□□□ 0.1
PTPN11-202ENST00000392597 OR5I1Q13606 314 aa15.7■□□□□ 0.1
PTPN11-202ENST00000392597 ECSCRQ19T08 205 aa15.7■□□□□ 0.1
PTPN11-202ENST00000392597 ATG101Q9BSB4 218 aa15.7■□□□□ 0.1
PTPN11-202ENST00000392597 Q9H3A6 140 aa15.7■□□□□ 0.1
PTPN11-202ENST00000392597 OTORQ9NRC9 128 aa15.7■□□□□ 0.1
PTPN11-202ENST00000392597 S4R3C0 116 aa15.7■□□□□ 0.1
PTPN11-202ENST00000392597 V9GYV3 84 aa15.7■□□□□ 0.1
PTPN11-202ENST00000392597 S100A8P05109 93 aa15.69■□□□□ 0.1
PTPN11-202ENST00000392597 HOXA5P20719 270 aa15.69■□□□□ 0.1
PTPN11-202ENST00000392597 CRIP2P52943 208 aaPredicted RBP15.69■□□□□ 0.1
PTPN11-202ENST00000392597 DEFB113Q30KQ7 82 aa15.69■□□□□ 0.1
PTPN11-202ENST00000392597 LRRC75A-AS1Q8N1F1 130 aa15.69■□□□□ 0.1
PTPN11-202ENST00000392597 OR4F17Q8NGA8 305 aa15.69■□□□□ 0.1
PTPN11-202ENST00000392597 HIF1ANQ9NWT6 349 aa15.69■□□□□ 0.1
PTPN11-202ENST00000392597 ZNF586Q9NXT0 402 aa15.69■□□□□ 0.1
PTPN11-202ENST00000392597 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.68■□□□□ 0.11e-13■■■■□ 25.4
PTPN11-202ENST00000392597 CTSGP08311 255 aa15.68■□□□□ 0.1
PTPN11-202ENST00000392597 NDUFA6P56556 154 aa15.68■□□□□ 0.1
PTPN11-202ENST00000392597 ACTL10Q5JWF8 245 aa15.68■□□□□ 0.1
PTPN11-202ENST00000392597 LINC00479Q96M42 142 aa15.68■□□□□ 0.1
PTPN11-202ENST00000392597 GAR1Q9NY12 217 aaKnown RBP15.68■□□□□ 0.1
PTPN11-202ENST00000392597 NOTCH2Q04721 2471 aa15.68■□□□□ 0.1
PTPN11-202ENST00000392597 ZNF320A2RRD8 509 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 ZNF98A6NK75 572 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 SNRPCP09234 159 aaKnown RBP15.67■□□□□ 0.1
PTPN11-202ENST00000392597 IGLC2P0DOY2 106 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 UBE2G1P62253 170 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 GNG5P63218 68 aa15.67■□□□□ 0.1
PTPN11-202ENST00000392597 USF2Q15853 346 aaPredicted RBP15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms