RNA–Protein interactions for RNA: ENST00000390990.1

RNU6-239P-201, Transcript of RNA, U6 small nuclear 239, pseudogene, humanhuman

BASIC

Gene RNU6-239P, Length 99 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-239P-201ENST00000390990 TMEM161BQ8NDZ6 487 aa-2.18□□□□□ -2.76
RNU6-239P-201ENST00000390990 ATP6V1C2Q8NEY4 427 aa-2.18□□□□□ -2.76
RNU6-239P-201ENST00000390990 PACRGQ96M98 296 aaPredicted RBP-2.18□□□□□ -2.76
RNU6-239P-201ENST00000390990 PRR15LQ9BU68 103 aa-2.18□□□□□ -2.76
RNU6-239P-201ENST00000390990 POFUT2Q9Y2G5 429 aa-2.18□□□□□ -2.76
RNU6-239P-201ENST00000390990 COL24A1Q17RW2 1714 aa-2.19□□□□□ -2.76
RNU6-239P-201ENST00000390990 A0A087WSZ3 146 aa-2.19□□□□□ -2.76
RNU6-239P-201ENST00000390990 A6NN06 94 aa-2.19□□□□□ -2.76
RNU6-239P-201ENST00000390990 IFNA10P01566 189 aa-2.19□□□□□ -2.76
RNU6-239P-201ENST00000390990 KCNJ3P48549 501 aa-2.19□□□□□ -2.76
RNU6-239P-201ENST00000390990 WFDC2Q14508 124 aa-2.19□□□□□ -2.76
RNU6-239P-201ENST00000390990 TRAPPC6BQ86SZ2 158 aa-2.19□□□□□ -2.76
RNU6-239P-201ENST00000390990 OR5L1Q8NGL2 311 aa-2.19□□□□□ -2.76
RNU6-239P-201ENST00000390990 DIRAS2Q96HU8 199 aa-2.19□□□□□ -2.76
RNU6-239P-201ENST00000390990 OR51I2Q9H344 312 aa-2.19□□□□□ -2.76
RNU6-239P-201ENST00000390990 CTTNBP2Q8WZ74 1663 aa-2.2□□□□□ -2.76
RNU6-239P-201ENST00000390990 DPRXA6NFQ7 191 aa-2.2□□□□□ -2.76
RNU6-239P-201ENST00000390990 SULT1C4O75897 302 aa-2.2□□□□□ -2.76
RNU6-239P-201ENST00000390990 BRI3O95415 125 aa-2.2□□□□□ -2.76
RNU6-239P-201ENST00000390990 ANP32AP39687 249 aaKnown RBP-2.2□□□□□ -2.76
RNU6-239P-201ENST00000390990 ZNHIT3Q15649 155 aaPredicted RBP-2.2□□□□□ -2.76
RNU6-239P-201ENST00000390990 FBXO48Q5FWF7 155 aa-2.2□□□□□ -2.76
RNU6-239P-201ENST00000390990 LINC00299Q6ZSB3 139 aa-2.2□□□□□ -2.76
RNU6-239P-201ENST00000390990 HIST1H2BLQ99880 126 aa-2.2□□□□□ -2.76
RNU6-239P-201ENST00000390990 C11orf68Q9H3H3 251 aaKnown RBP-2.2□□□□□ -2.76
RNU6-239P-201ENST00000390990 FBXL12Q9NXK8 326 aa-2.2□□□□□ -2.76
RNU6-239P-201ENST00000390990 HECW1Q76N89 1606 aa-2.2□□□□□ -2.76
RNU6-239P-201ENST00000390990 PLXND1Q9Y4D7 1925 aa-2.21□□□□□ -2.76
RNU6-239P-201ENST00000390990 EPPK1P58107 5090 aaKnown RBP-2.21□□□□□ -2.76
RNU6-239P-201ENST00000390990 RYR1P21817 5038 aa-2.21□□□□□ -2.76
RNU6-239P-201ENST00000390990 TINCRA0A1B0GVN0 87 aa-2.21□□□□□ -2.76
RNU6-239P-201ENST00000390990 H0YIV9 168 aa-2.21□□□□□ -2.76
RNU6-239P-201ENST00000390990 TNNC1P63316 161 aa-2.21□□□□□ -2.76
RNU6-239P-201ENST00000390990 RYR3Q15413 4870 aa-2.21□□□□□ -2.76
RNU6-239P-201ENST00000390990 C1orf134Q5TEV5 83 aa-2.21□□□□□ -2.76
RNU6-239P-201ENST00000390990 DNM1P34Q6PK57 102 aa-2.21□□□□□ -2.76
RNU6-239P-201ENST00000390990 SLC51BQ86UW2 128 aa-2.21□□□□□ -2.76
RNU6-239P-201ENST00000390990 PPTC7Q8NI37 304 aa-2.21□□□□□ -2.76
RNU6-239P-201ENST00000390990 TOMM6Q96B49 74 aa-2.21□□□□□ -2.76
RNU6-239P-201ENST00000390990 ADAT3Q96EY9 351 aaPredicted RBP-2.21□□□□□ -2.76
RNU6-239P-201ENST00000390990 NIPSNAP1Q9BPW8 284 aa-2.21□□□□□ -2.76
RNU6-239P-201ENST00000390990 SLC25A21Q9BQT8 299 aaPredicted RBP-2.21□□□□□ -2.76
RNU6-239P-201ENST00000390990 PRADC1Q9BSG0 188 aa-2.21□□□□□ -2.76
RNU6-239P-201ENST00000390990 MYLKQ15746 1914 aa-2.22□□□□□ -2.76
RNU6-239P-201ENST00000390990 S100A4P26447 101 aaKnown RBP-2.22□□□□□ -2.76
RNU6-239P-201ENST00000390990 AP2S1P53680 142 aaPredicted RBP-2.22□□□□□ -2.76
RNU6-239P-201ENST00000390990 CDK6Q00534 326 aa-2.22□□□□□ -2.76
RNU6-239P-201ENST00000390990 PPP1R1AQ13522 171 aa-2.22□□□□□ -2.76
RNU6-239P-201ENST00000390990 RSU1Q15404 277 aa-2.22□□□□□ -2.76
RNU6-239P-201ENST00000390990 RAB37Q96AX2 223 aa-2.22□□□□□ -2.76
RNU6-239P-201ENST00000390990 LINC00467Q9BRT7 94 aa-2.22□□□□□ -2.76
RNU6-239P-201ENST00000390990 MAP2P11137 1827 aaKnown RBP-2.22□□□□□ -2.77
RNU6-239P-201ENST00000390990 PPRC1Q5VV67 1664 aaKnown RBP-2.22□□□□□ -2.77
RNU6-239P-201ENST00000390990 BIVM-ERCC5R4GMW8 1640 aa-2.23□□□□□ -2.77
RNU6-239P-201ENST00000390990 A0A087X0T9 212 aa-2.23□□□□□ -2.77
RNU6-239P-201ENST00000390990 A0A0J9YY99 117 aa-2.23□□□□□ -2.77
RNU6-239P-201ENST00000390990 M0R233 179 aa-2.23□□□□□ -2.77
RNU6-239P-201ENST00000390990 NMBP08949 121 aa-2.23□□□□□ -2.77
RNU6-239P-201ENST00000390990 CDC34P49427 236 aaPredicted RBP-2.23□□□□□ -2.77
RNU6-239P-201ENST00000390990 YPEL3P61236 119 aaPredicted RBP-2.23□□□□□ -2.77
RNU6-239P-201ENST00000390990 SYCP1Q15431 976 aa-2.23□□□□□ -2.77
RNU6-239P-201ENST00000390990 BATFQ16520 125 aa-2.23□□□□□ -2.77
RNU6-239P-201ENST00000390990 ST13P4Q8IZP2 240 aaPredicted RBP-2.23□□□□□ -2.77
RNU6-239P-201ENST00000390990 LY96Q9Y6Y9 160 aa-2.23□□□□□ -2.77
RNU6-239P-201ENST00000390990 SPTA1P02549 2419 aa-2.24□□□□□ -2.77
RNU6-239P-201ENST00000390990 FTCDNL1E5RQL4 147 aa-2.24□□□□□ -2.77
RNU6-239P-201ENST00000390990 MKRN2OSH3BPM6 223 aa-2.24□□□□□ -2.77
RNU6-239P-201ENST00000390990 OR7C1O76099 320 aaPredicted RBP-2.24□□□□□ -2.77
RNU6-239P-201ENST00000390990 CCL2P13500 99 aa-2.24□□□□□ -2.77
RNU6-239P-201ENST00000390990 SYT1P21579 422 aa-2.24□□□□□ -2.77
RNU6-239P-201ENST00000390990 MARCKSL1P49006 195 aa-2.24□□□□□ -2.77
RNU6-239P-201ENST00000390990 SLAMF1Q13291 335 aa-2.24□□□□□ -2.77
RNU6-239P-201ENST00000390990 FXYD3Q14802 87 aa-2.24□□□□□ -2.77
RNU6-239P-201ENST00000390990 CD200R1LQ6Q8B3 271 aa-2.24□□□□□ -2.77
RNU6-239P-201ENST00000390990 C5orf56Q8N8D9 126 aa-2.24□□□□□ -2.77
RNU6-239P-201ENST00000390990 OR10K1Q8NGX5 313 aa-2.24□□□□□ -2.77
RNU6-239P-201ENST00000390990 DHRS9Q9BPW9 319 aa-2.24□□□□□ -2.77
RNU6-239P-201ENST00000390990 EPG5Q9HCE0 2579 aa-2.24□□□□□ -2.77
RNU6-239P-201ENST00000390990 CHD8Q9HCK8 2581 aa-2.24□□□□□ -2.77
RNU6-239P-201ENST00000390990 DOCK5Q9H7D0 1870 aa-2.24□□□□□ -2.77
RNU6-239P-201ENST00000390990 NBDYA0A0U1RRE5 68 aa-2.25□□□□□ -2.77
RNU6-239P-201ENST00000390990 EXOC1LA0A1B0GW35 172 aa-2.25□□□□□ -2.77
RNU6-239P-201ENST00000390990 H7BYZ3 331 aa-2.25□□□□□ -2.77
RNU6-239P-201ENST00000390990 IGHV3-33P01772 117 aa-2.25□□□□□ -2.77
RNU6-239P-201ENST00000390990 RPS3P23396 243 aaKnown RBP eCLIP-2.25□□□□□ -2.77
RNU6-239P-201ENST00000390990 KRTAP6-2Q3LI66 62 aa-2.25□□□□□ -2.77
RNU6-239P-201ENST00000390990 TNFAIP8L2Q6P589 184 aaPredicted RBP-2.25□□□□□ -2.77
RNU6-239P-201ENST00000390990 OR51A2Q8NGJ7 313 aa-2.25□□□□□ -2.77
RNU6-239P-201ENST00000390990 LRRC20Q8TCA0 184 aa-2.25□□□□□ -2.77
RNU6-239P-201ENST00000390990 CYP4F30PQ9H0H9 118 aa-2.25□□□□□ -2.77
RNU6-239P-201ENST00000390990 C1orf109Q9NX04 203 aa-2.25□□□□□ -2.77
RNU6-239P-201ENST00000390990 USP9YO00507 2555 aaPredicted RBP-2.25□□□□□ -2.77
RNU6-239P-201ENST00000390990 DNAH6Q9C0G6 4158 aa-2.26□□□□□ -2.77
RNU6-239P-201ENST00000390990 CSTAP01040 98 aa-2.26□□□□□ -2.77
RNU6-239P-201ENST00000390990 ORM1P02763 201 aa-2.26□□□□□ -2.77
RNU6-239P-201ENST00000390990 Q5VSD8 79 aa-2.26□□□□□ -2.77
RNU6-239P-201ENST00000390990 CCDC124Q96CT7 223 aaKnown RBP-2.26□□□□□ -2.77
RNU6-239P-201ENST00000390990 CMTM6Q9NX76 183 aa-2.26□□□□□ -2.77
RNU6-239P-201ENST00000390990 ATG2AQ2TAZ0 1938 aa-2.27□□□□□ -2.77
RNU6-239P-201ENST00000390990 ATRQ13535 2644 aa-2.27□□□□□ -2.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms