RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 SGK494Q96LW2 274 aa11.84□□□□□ -0.51
VPS9D1-201ENST00000389386 AP5S1Q9NUS5 200 aa11.84□□□□□ -0.51
VPS9D1-201ENST00000389386 IGHV3-7P01780 117 aa11.83□□□□□ -0.52
VPS9D1-201ENST00000389386 ZNF826PQ6ZT77 177 aa11.83□□□□□ -0.52
VPS9D1-201ENST00000389386 DDB2Q92466 427 aa11.83□□□□□ -0.52
VPS9D1-201ENST00000389386 PAXXQ9BUH6 204 aa11.83□□□□□ -0.52
VPS9D1-201ENST00000389386 KLF12Q9Y4X4 402 aa11.83□□□□□ -0.52
VPS9D1-201ENST00000389386 APOHP02749 345 aaPredicted RBP11.83□□□□□ -0.52
VPS9D1-201ENST00000389386 MYCNOSP40205 109 aa11.83□□□□□ -0.52
VPS9D1-201ENST00000389386 ACP7Q6ZNF0 438 aa11.83□□□□□ -0.52
VPS9D1-201ENST00000389386 PRR7Q8TB68 274 aa11.83□□□□□ -0.52
VPS9D1-201ENST00000389386 GPR82Q96P67 336 aa11.83□□□□□ -0.52
VPS9D1-201ENST00000389386 GNG12Q9UBI6 72 aa11.83□□□□□ -0.52
VPS9D1-201ENST00000389386 C19orf71A6NCJ1 209 aa11.82□□□□□ -0.52
VPS9D1-201ENST00000389386 ZNF207O43670 478 aaKnown RBP11.82□□□□□ -0.52
VPS9D1-201ENST00000389386 FCGR2BP31994 310 aaPredicted RBP11.82□□□□□ -0.52
VPS9D1-201ENST00000389386 KIR2DS2P43631 304 aa11.82□□□□□ -0.52
VPS9D1-201ENST00000389386 CSN1S1P47710 185 aa11.82□□□□□ -0.52
VPS9D1-201ENST00000389386 TCTEX1D4Q5JR98 221 aa11.82□□□□□ -0.52
VPS9D1-201ENST00000389386 C1orf229Q6ZS94 237 aaPredicted RBP11.82□□□□□ -0.52
VPS9D1-201ENST00000389386 VGLL1Q99990 258 aa11.82□□□□□ -0.52
VPS9D1-201ENST00000389386 GFRA4Q9GZZ7 299 aa11.82□□□□□ -0.52
VPS9D1-201ENST00000389386 SPANXB1Q9NS25 103 aaPredicted RBP11.82□□□□□ -0.52
VPS9D1-201ENST00000389386 PIEZO2Q9H5I5 2752 aa11.82□□□□□ -0.52
VPS9D1-201ENST00000389386 P01737 135 aa11.82□□□□□ -0.52
VPS9D1-201ENST00000389386 SMIM13P0DJ93 91 aa11.82□□□□□ -0.52
VPS9D1-201ENST00000389386 ZNF134P52741 427 aa11.82□□□□□ -0.52
VPS9D1-201ENST00000389386 C11orf53Q8IXP5 236 aa11.82□□□□□ -0.52
VPS9D1-201ENST00000389386 ZADH2Q8N4Q0 377 aa11.82□□□□□ -0.52
VPS9D1-201ENST00000389386 EPDR1Q9UM22 224 aa11.82□□□□□ -0.52
VPS9D1-201ENST00000389386 TNCP24821 2201 aa11.82□□□□□ -0.52
VPS9D1-201ENST00000389386 NKX2-8O15522 239 aa11.81□□□□□ -0.52
VPS9D1-201ENST00000389386 MOSP00540 346 aa11.81□□□□□ -0.52
VPS9D1-201ENST00000389386 IGHV3-13P01766 116 aa11.81□□□□□ -0.52
VPS9D1-201ENST00000389386 CXorf67Q86X51 503 aaPredicted RBP11.81□□□□□ -0.52
VPS9D1-201ENST00000389386 FXYD5Q96DB9 178 aa11.81□□□□□ -0.52
VPS9D1-201ENST00000389386 PGPEP1Q9NXJ5 209 aa11.81□□□□□ -0.52
VPS9D1-201ENST00000389386 ANKRD11Q6UB99 2663 aaPredicted RBP11.81□□□□□ -0.52
VPS9D1-201ENST00000389386 TEX50A0A1B0GTY4 177 aa11.81□□□□□ -0.52
VPS9D1-201ENST00000389386 WT1P19544 449 aaPredicted RBP11.81□□□□□ -0.52
VPS9D1-201ENST00000389386 TMEM177Q53S58 311 aa11.81□□□□□ -0.52
VPS9D1-201ENST00000389386 IFI27L2Q9H2X8 130 aa11.81□□□□□ -0.52
VPS9D1-201ENST00000389386 ZNF492Q9P255 531 aa11.81□□□□□ -0.52
VPS9D1-201ENST00000389386 HAX1O00165 279 aa11.8□□□□□ -0.52
VPS9D1-201ENST00000389386 TCTAP57738 103 aa11.8□□□□□ -0.52
VPS9D1-201ENST00000389386 ITLN1Q8WWA0 313 aa11.8□□□□□ -0.52
VPS9D1-201ENST00000389386 C18orf15Q96N68 181 aa11.8□□□□□ -0.52
VPS9D1-201ENST00000389386 LGALS9BQ3B8N2 356 aa11.8□□□□□ -0.52
VPS9D1-201ENST00000389386 LGALS9CQ6DKI2 356 aa11.8□□□□□ -0.52
VPS9D1-201ENST00000389386 MDP1Q86V88 176 aa11.8□□□□□ -0.52
VPS9D1-201ENST00000389386 ZNF714Q96N38 554 aa11.8□□□□□ -0.52
VPS9D1-201ENST00000389386 ICE1Q9Y2F5 2266 aa11.8□□□□□ -0.52
VPS9D1-201ENST00000389386 FBLL1A6NHQ2 334 aaKnown RBP11.8□□□□□ -0.52
VPS9D1-201ENST00000389386 J3QR89 54 aa11.8□□□□□ -0.52
VPS9D1-201ENST00000389386 CCL11P51671 97 aa11.8□□□□□ -0.52
VPS9D1-201ENST00000389386 WFDC2Q14508 124 aa11.8□□□□□ -0.52
VPS9D1-201ENST00000389386 PCP2Q8IVA1 136 aa11.8□□□□□ -0.52
VPS9D1-201ENST00000389386 MDS2Q8NDY4 140 aa11.8□□□□□ -0.52
VPS9D1-201ENST00000389386 OR8A1Q8NGG7 326 aa11.8□□□□□ -0.52
VPS9D1-201ENST00000389386 BLNKQ8WV28 456 aa11.8□□□□□ -0.52
VPS9D1-201ENST00000389386 SPRR3Q9UBC9 169 aa11.8□□□□□ -0.52
VPS9D1-201ENST00000389386 JPT1Q9UK76 154 aa11.8□□□□□ -0.52
VPS9D1-201ENST00000389386 A0A096LNJ9 63 aa11.79□□□□□ -0.52
VPS9D1-201ENST00000389386 VSTM5A8MXK1 200 aa11.79□□□□□ -0.52
VPS9D1-201ENST00000389386 K7EQM0 130 aa11.79□□□□□ -0.52
VPS9D1-201ENST00000389386 PRCDQ00LT1 54 aa11.79□□□□□ -0.52
VPS9D1-201ENST00000389386 C2orf83Q53S99 150 aa11.79□□□□□ -0.52
VPS9D1-201ENST00000389386 PATE2Q6UY27 113 aa11.79□□□□□ -0.52
VPS9D1-201ENST00000389386 OVOL3O00110 214 aa11.79□□□□□ -0.52
VPS9D1-201ENST00000389386 COX7A2P2O60397 106 aa11.79□□□□□ -0.52
VPS9D1-201ENST00000389386 FSTL3O95633 263 aa11.79□□□□□ -0.52
VPS9D1-201ENST00000389386 SLC25A5P05141 298 aaKnown RBP11.79□□□□□ -0.52
VPS9D1-201ENST00000389386 CD69Q07108 199 aa11.79□□□□□ -0.52
VPS9D1-201ENST00000389386 EDDM3AQ14507 147 aa11.79□□□□□ -0.52
VPS9D1-201ENST00000389386 FER1L6-AS2Q96M78 137 aa11.79□□□□□ -0.52
VPS9D1-201ENST00000389386 SPAG8Q99932 426 aaPredicted RBP11.79□□□□□ -0.52
VPS9D1-201ENST00000389386 IGF2RP11717 2491 aa11.78□□□□□ -0.52
VPS9D1-201ENST00000389386 KLRC4-KLRK1H3BQV0 150 aa11.78□□□□□ -0.52
VPS9D1-201ENST00000389386 FAM106CPP0CH98 169 aa11.78□□□□□ -0.52
VPS9D1-201ENST00000389386 FAM106AQ4KMX7 169 aa11.78□□□□□ -0.52
VPS9D1-201ENST00000389386 C10orf113Q5VZT2 155 aa11.78□□□□□ -0.52
VPS9D1-201ENST00000389386 PRSS3P2Q8NHM4 247 aa11.78□□□□□ -0.52
VPS9D1-201ENST00000389386 MRAP2Q96G30 205 aa11.78□□□□□ -0.52
VPS9D1-201ENST00000389386 GEMIN7Q9H840 131 aaKnown RBP11.78□□□□□ -0.52
VPS9D1-201ENST00000389386 CADP27708 2225 aa11.78□□□□□ -0.52
VPS9D1-201ENST00000389386 F8W1H4 67 aa11.78□□□□□ -0.52
VPS9D1-201ENST00000389386 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.78□□□□□ -0.52
VPS9D1-201ENST00000389386 LOXL3P58215 753 aa11.78□□□□□ -0.52
VPS9D1-201ENST00000389386 TM4SF20Q53R12 229 aa11.78□□□□□ -0.52
VPS9D1-201ENST00000389386 RPRMLQ8N4K4 120 aa11.78□□□□□ -0.52
VPS9D1-201ENST00000389386 GCSAMQ8N6F7 178 aa11.78□□□□□ -0.52
VPS9D1-201ENST00000389386 DAZAP1Q96EP5 407 aaKnown RBP11.78□□□□□ -0.52
VPS9D1-201ENST00000389386 PRNDQ9UKY0 176 aa11.78□□□□□ -0.52
VPS9D1-201ENST00000389386 LTAP01374 205 aa11.77□□□□□ -0.52
VPS9D1-201ENST00000389386 RNASE2P10153 161 aaKnown RBP11.77□□□□□ -0.52
VPS9D1-201ENST00000389386 ATP5IP56385 69 aaPredicted RBP11.77□□□□□ -0.52
VPS9D1-201ENST00000389386 CR1LQ2VPA4 569 aa11.77□□□□□ -0.52
VPS9D1-201ENST00000389386 INTS1Q8N201 2190 aaKnown RBP11.77□□□□□ -0.52
VPS9D1-201ENST00000389386 ZZEF1O43149 2961 aa11.77□□□□□ -0.53
VPS9D1-201ENST00000389386 PGPA6NDG6 321 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms