RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 A0A087X0K7 114 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 IZUMO1RA6ND01 250 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 NDUFA2O43678 99 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 CD7P09564 240 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 HOXB1P14653 301 aaPredicted RBP4.09□□□□□ -1.75
LTN1-202ENST00000389194 ADIPOQQ15848 244 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 C3orf36Q3SXR2 165 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 Q6P435 159 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 OR13C6PQ8NH95 151 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 C11orf68Q9H3H3 251 aaKnown RBP4.09□□□□□ -1.75
LTN1-202ENST00000389194 WDR83OSQ9Y284 106 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 COL8A2P25067 703 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 CA7P43166 264 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 PSG9Q00887 426 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 FAM106AQ4KMX7 169 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 ZNF585BQ52M93 769 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 C19orf54Q5BKX5 351 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 SPACA3Q8IXA5 215 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 LINC00469Q8N7U9 141 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 RNASE6Q93091 150 aaKnown RBP4.09□□□□□ -1.75
LTN1-202ENST00000389194 A0A087WWC5 75 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 RSPO1Q2MKA7 263 aaPredicted RBP4.09□□□□□ -1.75
LTN1-202ENST00000389194 C17orf82Q86X59 251 aaPredicted RBP4.09□□□□□ -1.75
LTN1-202ENST00000389194 FBLN5Q9UBX5 448 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 A0A0G2JNJ9 132 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 NBR2O15453 112 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 PPP1R17O96001 155 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 DIAPH2-AS1Q14236 149 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 ZNF474Q6S9Z5 364 aaPredicted RBP4.09□□□□□ -1.75
LTN1-202ENST00000389194 COLCA1Q6ZS62 124 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 MTURNQ8N3F0 131 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 Q9UFV3 132 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 C15orf62A8K5M9 175 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 OR5AN1Q8NGI8 311 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 RNASEH2CQ8TDP1 164 aaKnown RBP4.09□□□□□ -1.75
LTN1-202ENST00000389194 PSG8Q9UQ74 426 aa4.09□□□□□ -1.75
LTN1-202ENST00000389194 A0A1W2PS18 150 aa4.09□□□□□ -1.76
LTN1-202ENST00000389194 TCRBV4S1A1TA0A5B7 111 aa4.09□□□□□ -1.76
LTN1-202ENST00000389194 SPRY2O43597 315 aa4.09□□□□□ -1.76
LTN1-202ENST00000389194 LBHQ53QV2 105 aaPredicted RBP4.09□□□□□ -1.76
LTN1-202ENST00000389194 MRAP2Q96G30 205 aa4.09□□□□□ -1.76
LTN1-202ENST00000389194 SLC25A39Q9BZJ4 359 aaPredicted RBP4.09□□□□□ -1.76
LTN1-202ENST00000389194 GEMIN7Q9H840 131 aaKnown RBP4.09□□□□□ -1.76
LTN1-202ENST00000389194 PROK2Q9HC23 129 aa4.09□□□□□ -1.76
LTN1-202ENST00000389194 C2orf16Q68DN1 1984 aa4.09□□□□□ -1.76
LTN1-202ENST00000389194 OR11H12B2RN74 326 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 SRRM5B3KS81 715 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 MMP23AO75900 390 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 ZNF672Q499Z4 452 aaPredicted RBP4.08□□□□□ -1.76
LTN1-202ENST00000389194 LDLRAD2Q5SZI1 272 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 SPSB3Q6PJ21 355 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 GTSCR1Q86UQ5 136 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 LRTM2Q8N967 370 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 OR11H1Q8NG94 326 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 OR11H2Q8NH07 326 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 FAM168AQ92567 244 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 PRCDQ00LT1 54 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 WDR86Q86TI4 376 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 ZNF664Q8N3J9 261 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 DUX3Q96PT4 197 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 KIR2DL4Q99706 377 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 COL25A1Q9BXS0 654 aaPredicted RBP4.08□□□□□ -1.76
LTN1-202ENST00000389194 TECTAO75443 2155 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 IGHV2-26A0A0B4J1V2 119 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 A0A1B0GWB2 263 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 ERCC8Q13216 396 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 TMEM249Q2WGJ8 235 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 C15orf32Q32M92 178 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 ORMDL3Q8N138 153 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 C1orf147Q96MC9 270 aaPredicted RBP4.08□□□□□ -1.76
LTN1-202ENST00000389194 C19orf24Q9BVV8 132 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 D6R8Y8 96 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 SMIM13P0DJ93 91 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 KLRB1Q12918 225 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 CD300EQ496F6 205 aaPredicted RBP4.08□□□□□ -1.76
LTN1-202ENST00000389194 ZNF114Q8NC26 417 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 NDUFAF3Q9BU61 184 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 XIRP2A4UGR9 3374 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 PLXNA2O75051 1894 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 TLN1Q9Y490 2541 aaKnown RBP4.08□□□□□ -1.76
LTN1-202ENST00000389194 A0A1W2PRE2 83 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 IGHV4-39P01824 125 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 JOSD1Q15040 202 aaPredicted RBP4.08□□□□□ -1.76
LTN1-202ENST00000389194 RNF182Q8N6D2 247 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 TPSG1Q9NRR2 321 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 TRAV30A0A087WSZ9 112 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.08□□□□□ -1.76
LTN1-202ENST00000389194 TM4SF5O14894 197 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 FAM90A2PQ658T7 463 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 ALKBH7Q9BT30 221 aaPredicted RBP4.08□□□□□ -1.76
LTN1-202ENST00000389194 MBNL3Q9NUK0 354 aaKnown RBP4.08□□□□□ -1.76
LTN1-202ENST00000389194 SPCS1Q9Y6A9 102 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 NUP35Q8NFH5 326 aa4.08□□□□□ -1.76
LTN1-202ENST00000389194 EREGO14944 169 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 IGHV3-53P01767 116 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 ZNF688P0C7X2 276 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 SPRNQ5BIV9 151 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 C1orf122Q6ZSJ8 110 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 SYT8Q8NBV8 401 aa4.07□□□□□ -1.76
LTN1-202ENST00000389194 MBD3L1Q8WWY6 194 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms