RNA–Protein interactions for RNA: ENST00000380877.7

GABPB1-203, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABPB1, Length 4,816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-203ENST00000380877 FAM209BQ5JX69 171 aa9.89□□□□□ -0.83
GABPB1-203ENST00000380877 RUSC1-AS1Q66K80 236 aa9.89□□□□□ -0.83
GABPB1-203ENST00000380877 SPSB3Q6PJ21 355 aa9.89□□□□□ -0.83
GABPB1-203ENST00000380877 TMEM97Q5BJF2 176 aa9.89□□□□□ -0.83
GABPB1-203ENST00000380877 SONP18583 2426 aaKnown RBP9.89□□□□□ -0.83
GABPB1-203ENST00000380877 MYO18BQ8IUG5 2567 aa9.89□□□□□ -0.83
GABPB1-203ENST00000380877 PCNTO95613 3336 aa9.89□□□□□ -0.83
GABPB1-203ENST00000380877 M0R381 172 aa9.89□□□□□ -0.83
GABPB1-203ENST00000380877 FAM74A4Q5TZK3 123 aa9.89□□□□□ -0.83
GABPB1-203ENST00000380877 SAMD13Q5VXD3 122 aa9.89□□□□□ -0.83
GABPB1-203ENST00000380877 Q6AWC8 147 aa9.89□□□□□ -0.83
GABPB1-203ENST00000380877 FABP5P3A8MUU1 101 aa9.88□□□□□ -0.83
GABPB1-203ENST00000380877 G0S2P27469 103 aa9.88□□□□□ -0.83
GABPB1-203ENST00000380877 ADORA2A-AS1P86434 159 aa9.88□□□□□ -0.83
GABPB1-203ENST00000380877 TMEM183AQ8IXX5 376 aa9.88□□□□□ -0.83
GABPB1-203ENST00000380877 EXOC3-AS1Q8N2X6 119 aa9.88□□□□□ -0.83
GABPB1-203ENST00000380877 MAPK1IP1LQ8NDC0 245 aa9.88□□□□□ -0.83
GABPB1-203ENST00000380877 SOX21Q9Y651 276 aaPredicted RBP9.88□□□□□ -0.83
GABPB1-203ENST00000380877 IZUMO1RA6ND01 250 aa9.88□□□□□ -0.83
GABPB1-203ENST00000380877 TMEM136Q6ZRR5 245 aa9.88□□□□□ -0.83
GABPB1-203ENST00000380877 C11orf44Q8N8P7 122 aa9.88□□□□□ -0.83
GABPB1-203ENST00000380877 IGHV2-70P01814 119 aa9.88□□□□□ -0.83
GABPB1-203ENST00000380877 PRB4P10163 310 aaPredicted RBP9.88□□□□□ -0.83
GABPB1-203ENST00000380877 LINC01551Q86U37 167 aa9.88□□□□□ -0.83
GABPB1-203ENST00000380877 PKIAP61925 76 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 MSMPQ1L6U9 139 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 FER1L6-AS1Q8NA97 138 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 PEMTQ9UBM1 199 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 TRBV20OR9-2A0A075B6H5 130 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 SRRM4A7MD48 611 aaKnown RBP9.87□□□□□ -0.83
GABPB1-203ENST00000380877 ASIPP42127 132 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 ZNF329Q86UD4 541 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 AP5S1Q9NUS5 200 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 IGHV1-69DA0A0B4J2H0 117 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 PSMB11A5LHX3 300 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 IGHV1-69P01742 117 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 GATA3P23771 443 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 RRN3P1Q2M238 152 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 CYB5R2Q6BCY4 276 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 OR10AG1Q8NH19 301 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 TPSG1Q9NRR2 321 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 C9JCJ5 164 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 RNF224P0DH78 156 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 WT1-ASQ06250 92 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 ITLN2Q8WWU7 325 aaPredicted RBP9.87□□□□□ -0.83
GABPB1-203ENST00000380877 ASCL2Q99929 193 aa9.87□□□□□ -0.83
GABPB1-203ENST00000380877 HERVK_113P61574 105 aa9.86□□□□□ -0.83
GABPB1-203ENST00000380877 POU2AF1Q16633 256 aa9.86□□□□□ -0.83
GABPB1-203ENST00000380877 TCF23Q7RTU1 214 aa9.86□□□□□ -0.83
GABPB1-203ENST00000380877 DMRTC2Q8IXT2 367 aaPredicted RBP9.86□□□□□ -0.83
GABPB1-203ENST00000380877 GLMPQ8WWB7 406 aa9.86□□□□□ -0.83
GABPB1-203ENST00000380877 JMJD8Q96S16 334 aa9.86□□□□□ -0.83
GABPB1-203ENST00000380877 CA1P00915 261 aaPredicted RBP9.86□□□□□ -0.83
GABPB1-203ENST00000380877 GUSBP1Q15486 140 aa9.86□□□□□ -0.83
GABPB1-203ENST00000380877 CHD8Q9HCK8 2581 aa9.86□□□□□ -0.83
GABPB1-203ENST00000380877 TRBV7-1A0A0A6YYK4 115 aa9.86□□□□□ -0.83
GABPB1-203ENST00000380877 NUTF2P61970 127 aaKnown RBP9.86□□□□□ -0.83
GABPB1-203ENST00000380877 Q5PR19 223 aa9.86□□□□□ -0.83
GABPB1-203ENST00000380877 C1QL4Q86Z23 238 aa9.86□□□□□ -0.83
GABPB1-203ENST00000380877 TMEM242Q9NWH2 141 aa9.86□□□□□ -0.83
GABPB1-203ENST00000380877 M0R143 59 aa9.86□□□□□ -0.83
GABPB1-203ENST00000380877 TCRAP04437 139 aa9.86□□□□□ -0.83
GABPB1-203ENST00000380877 SIGLEC15Q6ZMC9 328 aa9.86□□□□□ -0.83
GABPB1-203ENST00000380877 C9JQL5 133 aa9.85□□□□□ -0.83
GABPB1-203ENST00000380877 SCGB1D4Q6XE38 83 aa9.85□□□□□ -0.83
GABPB1-203ENST00000380877 HAPLN4Q86UW8 402 aa9.85□□□□□ -0.83
GABPB1-203ENST00000380877 TRBV24-1A0A075B6N3 115 aa9.85□□□□□ -0.83
GABPB1-203ENST00000380877 IFITM10A6NMD0 228 aa9.85□□□□□ -0.83
GABPB1-203ENST00000380877 ATP6V0E1O15342 81 aa9.85□□□□□ -0.83
GABPB1-203ENST00000380877 NUDT3O95989 172 aa9.85□□□□□ -0.83
GABPB1-203ENST00000380877 ZNF56Q15929 161 aa9.85□□□□□ -0.83
GABPB1-203ENST00000380877 ADCYAP1P18509 176 aa9.85□□□□□ -0.83
GABPB1-203ENST00000380877 PRELID3AQ96N28 172 aa9.85□□□□□ -0.83
GABPB1-203ENST00000380877 COLCA2A8K830 154 aa9.85□□□□□ -0.83
GABPB1-203ENST00000380877 TOMM40O96008 361 aa9.85□□□□□ -0.83
GABPB1-203ENST00000380877 SRD5A1P18405 259 aa9.85□□□□□ -0.83
GABPB1-203ENST00000380877 RNASE4P34096 147 aaKnown RBP9.85□□□□□ -0.83
GABPB1-203ENST00000380877 LDLRAD2Q5SZI1 272 aa9.85□□□□□ -0.83
GABPB1-203ENST00000380877 LRP4O75096 1905 aa9.84□□□□□ -0.83
GABPB1-203ENST00000380877 A0A1B0GW15 77 aa9.84□□□□□ -0.83
GABPB1-203ENST00000380877 PMCHL1Q16048 86 aa9.84□□□□□ -0.83
GABPB1-203ENST00000380877 USMG5Q96IX5 58 aa9.84□□□□□ -0.83
GABPB1-203ENST00000380877 NPIPB6E9PJ23 425 aa9.84□□□□□ -0.83
GABPB1-203ENST00000380877 FOLR2P14207 255 aa9.84□□□□□ -0.83
GABPB1-203ENST00000380877 FAM90A2PQ658T7 463 aa9.84□□□□□ -0.83
GABPB1-203ENST00000380877 LINC00518Q8N0U6 118 aa9.84□□□□□ -0.83
GABPB1-203ENST00000380877 TMEM170AQ8WVE7 144 aa9.84□□□□□ -0.83
GABPB1-203ENST00000380877 KLK15Q9H2R5 256 aa9.84□□□□□ -0.83
GABPB1-203ENST00000380877 IGKV2-40A0A087WW87 121 aaPredicted RBP9.84□□□□□ -0.83
GABPB1-203ENST00000380877 IGKV2D-40P01614 121 aaPredicted RBP9.84□□□□□ -0.83
GABPB1-203ENST00000380877 TCTAP57738 103 aa9.84□□□□□ -0.83
GABPB1-203ENST00000380877 NDPQ00604 133 aa9.84□□□□□ -0.83
GABPB1-203ENST00000380877 CXCL1P09341 107 aa9.83□□□□□ -0.84
GABPB1-203ENST00000380877 C8orf31Q8N9H6 132 aa9.83□□□□□ -0.84
GABPB1-203ENST00000380877 NUDT10Q8NFP7 164 aa9.83□□□□□ -0.84
GABPB1-203ENST00000380877 TSKUQ8WUA8 353 aa9.83□□□□□ -0.84
GABPB1-203ENST00000380877 NUDT11Q96G61 164 aa9.83□□□□□ -0.84
GABPB1-203ENST00000380877 SSBP4Q9BWG4 385 aaPredicted RBP9.83□□□□□ -0.84
GABPB1-203ENST00000380877 SELENOKQ9Y6D0 94 aa9.83□□□□□ -0.84
GABPB1-203ENST00000380877 NPIPB5A8MRT5 1133 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms