RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 HIST1H1AQ02539 215 aaPredicted RBP10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 RBMXL3Q8N7X1 1067 aaKnown RBP10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 OR10X1Q8NGY0 326 aa10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 MRPL36Q9P0J6 103 aaKnown RBP10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 S4R3C0 116 aa10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 CHD8Q9HCK8 2581 aa10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 PTPRBP23467 1997 aa10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 RTL8BQ17RB0 113 aa10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 FAM120AOSQ5T036 256 aa10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 TMEM116Q8NCL8 245 aa10.08□□□□□ -0.8
PRPF40B-202ENST00000380281 SMIM27A0A1W2PRY6 76 aa10.07□□□□□ -0.8
PRPF40B-202ENST00000380281 IZUMO1RA6ND01 250 aa10.07□□□□□ -0.8
PRPF40B-202ENST00000380281 LEPROTL1O95214 131 aa10.07□□□□□ -0.8
PRPF40B-202ENST00000380281 RUSC1-AS1Q66K80 236 aa10.07□□□□□ -0.8
PRPF40B-202ENST00000380281 OSTCQ9NRP0 149 aa10.07□□□□□ -0.8
PRPF40B-202ENST00000380281 TMEM14BQ9NUH8 114 aa10.07□□□□□ -0.8
PRPF40B-202ENST00000380281 TEX48A0A1B0GUV7 120 aa10.07□□□□□ -0.8
PRPF40B-202ENST00000380281 A0A1B0GV72 72 aa10.07□□□□□ -0.8
PRPF40B-202ENST00000380281 IGHV1-46P01743 117 aa10.07□□□□□ -0.8
PRPF40B-202ENST00000380281 RAB9AP51151 201 aa10.07□□□□□ -0.8
PRPF40B-202ENST00000380281 TMEM249Q2WGJ8 235 aa10.07□□□□□ -0.8
PRPF40B-202ENST00000380281 TCF24Q7RTU0 167 aa10.07□□□□□ -0.8
PRPF40B-202ENST00000380281 NEGR1Q7Z3B1 354 aa10.07□□□□□ -0.8
PRPF40B-202ENST00000380281 OR2K2Q8NGT1 345 aa10.07□□□□□ -0.8
PRPF40B-202ENST00000380281 C11orf52Q96A22 123 aa10.07□□□□□ -0.8
PRPF40B-202ENST00000380281 RITA1Q96K30 269 aa10.07□□□□□ -0.8
PRPF40B-202ENST00000380281 TPPP3Q9BW30 176 aa10.07□□□□□ -0.8
PRPF40B-202ENST00000380281 TRAV26-1A0A087WT03 109 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 IGHV1-24A0A0C4DH33 117 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 ISLRO14498 428 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 CSN3P07498 182 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 FTH1P19P0C7X4 201 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 SCGB2A2Q13296 93 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 C2orf91Q6ZV80 131 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 DDB2Q92466 427 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 PLSCR4Q9NRQ2 329 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 LYNX1G3V0Z9 82 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 LYNX1P0DP58 116 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 HIST1H1EP10412 219 aaKnown RBP10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 PRR20EP86478 221 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 PRR20CP86479 221 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 PRR20DP86480 221 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 PRR20BP86481 221 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 PRR20AP86496 221 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 COX19Q49B96 90 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 TMEM97Q5BJF2 176 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 OR10AG1Q8NH19 301 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 TMEM191AQ9H0A3 160 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 AMMECR1Q9Y4X0 333 aaPredicted RBP10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 TMEM265A0A087WTH1 108 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 K7EP34 96 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 IGLV2-8P01709 118 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 LYPD2Q6UXB3 125 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 BPIFA4PQ86YQ2 179 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 NUP35Q8NFH5 326 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 ATP6V0BQ99437 205 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 NPFFR1Q9GZQ6 430 aa10.06□□□□□ -0.8
PRPF40B-202ENST00000380281 TRAV8-1A0A0A6YYK1 113 aa10.05□□□□□ -0.8
PRPF40B-202ENST00000380281 F2RL2O00254 374 aa10.05□□□□□ -0.8
PRPF40B-202ENST00000380281 UPK2O00526 184 aa10.05□□□□□ -0.8
PRPF40B-202ENST00000380281 MBNL2Q5VZF2 373 aaKnown RBP10.05□□□□□ -0.8
PRPF40B-202ENST00000380281 ZNF788Q6ZQV5 615 aa10.05□□□□□ -0.8
PRPF40B-202ENST00000380281 GAFA1Q96PS6 74 aa10.05□□□□□ -0.8
PRPF40B-202ENST00000380281 SLC25A10Q9UBX3 287 aaPredicted RBP10.05□□□□□ -0.8
PRPF40B-202ENST00000380281 LY96Q9Y6Y9 160 aa10.05□□□□□ -0.8
PRPF40B-202ENST00000380281 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.05□□□□□ -0.8
PRPF40B-202ENST00000380281 A0A0G2JLM5 398 aa10.05□□□□□ -0.8
PRPF40B-202ENST00000380281 IGLV1-44P01699 117 aa10.05□□□□□ -0.8
PRPF40B-202ENST00000380281 SLC25A5P05141 298 aaKnown RBP10.05□□□□□ -0.8
PRPF40B-202ENST00000380281 ZNF883P0CG24 379 aa10.05□□□□□ -0.8
PRPF40B-202ENST00000380281 C8orf88P0DMB2 117 aa10.05□□□□□ -0.8
PRPF40B-202ENST00000380281 Q71RC1 249 aaPredicted RBP10.05□□□□□ -0.8
PRPF40B-202ENST00000380281 SIGMAR1Q99720 223 aa10.05□□□□□ -0.8
PRPF40B-202ENST00000380281 PRNDQ9UKY0 176 aa10.05□□□□□ -0.8
PRPF40B-202ENST00000380281 PTPRQQ9UMZ3 2332 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 C9orf118A6NHY6 69 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 IGHG3P01860 377 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 ERHP84090 104 aaKnown RBP10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 TEX45Q8NA69 505 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 PAXXQ9BUH6 204 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 TMEM167BQ9NRX6 74 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 SPCS1Q9Y6A9 102 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 SPTBN4Q9H254 2564 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 RNASE2P10153 161 aaKnown RBP10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 AREGP15514 252 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 GLRXP35754 106 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 CRYBA4P53673 196 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 TAS2R45P59539 299 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 MZT1Q08AG7 82 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 ZADH2Q8N4Q0 377 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 FLYWCH2Q96CP2 140 aaKnown RBP10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 SLC25A33Q9BSK2 321 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 JKAMPQ9P055 326 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 FOXA2Q9Y261 457 aaPredicted RBP10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 A0A1W2PRE2 83 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 PGPA6NDG6 321 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 CNTFRP26992 372 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 PRCDQ00LT1 54 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 WT1-ASQ06250 92 aa10.04□□□□□ -0.8
PRPF40B-202ENST00000380281 KIR3DS1Q14943 382 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms