RNA–Protein interactions for RNA: ENST00000380025.8

NDEL1-202, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 5 BASIC

Gene NDEL1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-202ENST00000380025 SHANK2-AS3Q9BTD1 123 aa19.63■□□□□ 0.73
NDEL1-202ENST00000380025 Q9H3A6 140 aa19.63■□□□□ 0.73
NDEL1-202ENST00000380025 USP9XQ93008 2570 aaPredicted RBP19.63■□□□□ 0.73
NDEL1-202ENST00000380025 TRAV30A0A087WSZ9 112 aa19.63■□□□□ 0.73
NDEL1-202ENST00000380025 BAGE2Q86Y30 109 aa19.63■□□□□ 0.73
NDEL1-202ENST00000380025 RNF125Q96EQ8 232 aa19.63■□□□□ 0.73
NDEL1-202ENST00000380025 ZNF586Q9NXT0 402 aa19.63■□□□□ 0.73
NDEL1-202ENST00000380025 WI2-2373I1.2A0A1W2PRP0 233 aa19.62■□□□□ 0.73
NDEL1-202ENST00000380025 VWC2LB2RUY7 222 aa19.62■□□□□ 0.73
NDEL1-202ENST00000380025 H3BRN7 92 aa19.62■□□□□ 0.73
NDEL1-202ENST00000380025 YPEL3P61236 119 aaPredicted RBP19.62■□□□□ 0.73
NDEL1-202ENST00000380025 KLF12Q9Y4X4 402 aa19.62■□□□□ 0.73
NDEL1-202ENST00000380025 USP24Q9UPU5 2620 aa19.62■□□□□ 0.73
NDEL1-202ENST00000380025 NDUFB8O95169 186 aa19.61■□□□□ 0.73
NDEL1-202ENST00000380025 IL4P05112 153 aa19.61■□□□□ 0.73
NDEL1-202ENST00000380025 OR8I2Q8N0Y5 310 aa19.61■□□□□ 0.73
NDEL1-202ENST00000380025 C5orf17Q8NAS9 161 aa19.61■□□□□ 0.73
NDEL1-202ENST00000380025 HIST1H1EP10412 219 aaKnown RBP19.61■□□□□ 0.73
NDEL1-202ENST00000380025 C21orf62Q9NYP8 219 aa19.61■□□□□ 0.73
NDEL1-202ENST00000380025 THYN1Q9P016 225 aa19.61■□□□□ 0.73
NDEL1-202ENST00000380025 OR2J3O76001 311 aa19.6■□□□□ 0.73
NDEL1-202ENST00000380025 OR10D4PQ8NGN7 298 aa19.6■□□□□ 0.73
NDEL1-202ENST00000380025 TMEM68Q96MH6 324 aa19.6■□□□□ 0.73
NDEL1-202ENST00000380025 ATG101Q9BSB4 218 aa19.6■□□□□ 0.73
NDEL1-202ENST00000380025 RPH3ALQ9UNE2 315 aa19.6■□□□□ 0.73
NDEL1-202ENST00000380025 VPS13CQ709C8 3753 aa19.6■□□□□ 0.73
NDEL1-202ENST00000380025 NDUFS8O00217 210 aa19.6■□□□□ 0.73
NDEL1-202ENST00000380025 FABP4P15090 132 aa19.6■□□□□ 0.73
NDEL1-202ENST00000380025 UBE2G1P62253 170 aa19.6■□□□□ 0.73
NDEL1-202ENST00000380025 CACNA1BQ00975 2339 aa19.59■□□□□ 0.73
NDEL1-202ENST00000380025 ATP5J2P56134 94 aa19.59■□□□□ 0.73
NDEL1-202ENST00000380025 Q56UQ5 140 aa19.59■□□□□ 0.73
NDEL1-202ENST00000380025 HIST1H2BLQ99880 126 aa19.59■□□□□ 0.73
NDEL1-202ENST00000380025 SPOCK3Q9BQ16 436 aa19.59■□□□□ 0.73
NDEL1-202ENST00000380025 NIT2Q9NQR4 276 aa19.59■□□□□ 0.73
NDEL1-202ENST00000380025 PRB1P04280 392 aa19.59■□□□□ 0.73
NDEL1-202ENST00000380025 CBLN1P23435 193 aa19.59■□□□□ 0.73
NDEL1-202ENST00000380025 USF2Q15853 346 aaPredicted RBP19.59■□□□□ 0.73
NDEL1-202ENST00000380025 CLEC2AQ6UVW9 174 aa19.59■□□□□ 0.73
NDEL1-202ENST00000380025 SGK494Q96LW2 274 aa19.59■□□□□ 0.73
NDEL1-202ENST00000380025 C7orf69Q9H7B7 122 aa19.59■□□□□ 0.73
NDEL1-202ENST00000380025 TCRAP04437 139 aa19.58■□□□□ 0.72
NDEL1-202ENST00000380025 FRMD6-AS1P0C7T7 363 aa19.58■□□□□ 0.72
NDEL1-202ENST00000380025 PYY3Q5JQD4 70 aa19.58■□□□□ 0.72
NDEL1-202ENST00000380025 FAM231DQ6ZW35 169 aa19.58■□□□□ 0.72
NDEL1-202ENST00000380025 OTORQ9NRC9 128 aa19.58■□□□□ 0.72
NDEL1-202ENST00000380025 IGHV3-23P01764 117 aa19.57■□□□□ 0.72
NDEL1-202ENST00000380025 BPIFA4PQ86YQ2 179 aa19.57■□□□□ 0.72
NDEL1-202ENST00000380025 BCL6BQ8N143 479 aaPredicted RBP19.57■□□□□ 0.72
NDEL1-202ENST00000380025 SERTAD4Q9NUC0 356 aa19.57■□□□□ 0.72
NDEL1-202ENST00000380025 IGHV3OR16-10A0A075B7F0 116 aa19.57■□□□□ 0.72
NDEL1-202ENST00000380025 SMIM27A0A1W2PRY6 76 aa19.57■□□□□ 0.72
NDEL1-202ENST00000380025 ZNF705GA8MUZ8 300 aaPredicted RBP19.57■□□□□ 0.72
NDEL1-202ENST00000380025 ATP6V0E1O15342 81 aa19.57■□□□□ 0.72
NDEL1-202ENST00000380025 ADMP35318 185 aa19.57■□□□□ 0.72
NDEL1-202ENST00000380025 FAM110DQ8TAY7 271 aaPredicted RBP19.57■□□□□ 0.72
NDEL1-202ENST00000380025 IGHV4-30-2A0A087WSY4 118 aa19.56■□□□□ 0.72
NDEL1-202ENST00000380025 IGLC2P0DOY2 106 aa19.56■□□□□ 0.72
NDEL1-202ENST00000380025 FBXL7Q9UJT9 491 aa19.56■□□□□ 0.72
NDEL1-202ENST00000380025 TCL1AP56279 114 aa19.56■□□□□ 0.72
NDEL1-202ENST00000380025 SMIM12Q96EX1 92 aa19.56■□□□□ 0.72
NDEL1-202ENST00000380025 FMC1Q96HJ9 113 aa19.56■□□□□ 0.72
NDEL1-202ENST00000380025 TMUB1Q9BVT8 246 aa19.56■□□□□ 0.72
NDEL1-202ENST00000380025 TRBV19A0A075B6N1 114 aa19.55■□□□□ 0.72
NDEL1-202ENST00000380025 IGHV1-69DA0A0B4J2H0 117 aa19.55■□□□□ 0.72
NDEL1-202ENST00000380025 MRPS12O15235 138 aaKnown RBP19.55■□□□□ 0.72
NDEL1-202ENST00000380025 CA1P00915 261 aaPredicted RBP19.55■□□□□ 0.72
NDEL1-202ENST00000380025 IGHV1-69P01742 117 aa19.55■□□□□ 0.72
NDEL1-202ENST00000380025 FCGR2BP31994 310 aaPredicted RBP19.55■□□□□ 0.72
NDEL1-202ENST00000380025 IER3P46695 156 aa19.55■□□□□ 0.72
NDEL1-202ENST00000380025 ECSCRQ19T08 205 aa19.55■□□□□ 0.72
NDEL1-202ENST00000380025 UNQ5815/PRO19632Q6UWF5 114 aa19.55■□□□□ 0.72
NDEL1-202ENST00000380025 EXOC3-AS1Q8N2X6 119 aa19.55■□□□□ 0.72
NDEL1-202ENST00000380025 MBD6Q96DN6 1003 aa19.55■□□□□ 0.72
NDEL1-202ENST00000380025 GPR82Q96P67 336 aa19.55■□□□□ 0.72
NDEL1-202ENST00000380025 OR2T8A6NH00 312 aa19.54■□□□□ 0.72
NDEL1-202ENST00000380025 NUDT10Q8NFP7 164 aa19.54■□□□□ 0.72
NDEL1-202ENST00000380025 NUDT11Q96G61 164 aa19.54■□□□□ 0.72
NDEL1-202ENST00000380025 PACRGQ96M98 296 aaPredicted RBP19.54■□□□□ 0.72
NDEL1-202ENST00000380025 C17orf77Q96MU5 243 aa19.54■□□□□ 0.72
NDEL1-202ENST00000380025 BBC3Q96PG8 261 aaPredicted RBP19.54■□□□□ 0.72
NDEL1-202ENST00000380025 MLST8Q9BVC4 326 aa19.54■□□□□ 0.72
NDEL1-202ENST00000380025 KLK9Q2XQG4 91 aa19.54■□□□□ 0.72
NDEL1-202ENST00000380025 OR4F17Q8NGA8 305 aa19.54■□□□□ 0.72
NDEL1-202ENST00000380025 MRPL18Q9H0U6 180 aaKnown RBP19.54■□□□□ 0.72
NDEL1-202ENST00000380025 KLK9Q9UKQ9 250 aa19.54■□□□□ 0.72
NDEL1-202ENST00000380025 TRAV40A0A0B4J280 105 aa19.53■□□□□ 0.72
NDEL1-202ENST00000380025 SH2D7A6NKC9 451 aaPredicted RBP19.53■□□□□ 0.72
NDEL1-202ENST00000380025 LTAP01374 205 aa19.53■□□□□ 0.72
NDEL1-202ENST00000380025 AMBPP02760 352 aa19.53■□□□□ 0.72
NDEL1-202ENST00000380025 CTSGP08311 255 aa19.53■□□□□ 0.72
NDEL1-202ENST00000380025 PRR27Q6MZM9 219 aa19.53■□□□□ 0.72
NDEL1-202ENST00000380025 C5orf56Q8N8D9 126 aa19.53■□□□□ 0.72
NDEL1-202ENST00000380025 LINC01548A6NM66 108 aa19.53■□□□□ 0.72
NDEL1-202ENST00000380025 GATCO43716 136 aaKnown RBP19.53■□□□□ 0.72
NDEL1-202ENST00000380025 SPINK4O60575 86 aa19.53■□□□□ 0.72
NDEL1-202ENST00000380025 BRD3OSQ6XYD6 125 aa19.53■□□□□ 0.72
NDEL1-202ENST00000380025 RNF24Q9Y225 148 aa19.53■□□□□ 0.72
NDEL1-202ENST00000380025 SLC35B1P78383 322 aa19.52■□□□□ 0.72
NDEL1-202ENST00000380025 VN1R17PQ8TDU5 208 aa19.52■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms