RNA–Protein interactions for RNA: ENST00000379989.6

CDKL5-201, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 1 (best) BASIC

Gene CDKL5, Length 3,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-201ENST00000379989 CHAC1Q9BUX1 264 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 PTPRBP23467 1997 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 ASCC3Q8N3C0 2202 aaKnown RBP6.05□□□□□ -1.44
CDKL5-201ENST00000379989 TRAV17A0A0B4J275 112 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 KIR2DS1A0A191URI9 304 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 LINC01548A6NM66 108 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 C15orf62A8K5M9 175 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 SS18L1O75177 396 aaPredicted RBP6.05□□□□□ -1.44
CDKL5-201ENST00000379989 HBBP68871 147 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 PLGLB1Q02325 96 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 GAGE2BQ13066 116 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 KIR2DS1Q14954 304 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 GAGE2EQ4V326 116 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 ABHD12Q8N2K0 398 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 C3orf56Q8N813 242 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 DLL3Q9NYJ7 618 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 HIGD1BQ9P298 99 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 GAGE2DQ9UEU5 116 aa6.05□□□□□ -1.44
CDKL5-201ENST00000379989 C5orf49A4QMS7 147 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 GGTLC3B5MD39 225 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 CSN3P07498 182 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 CELA2AP08217 269 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 MBNL2Q5VZF2 373 aaKnown RBP6.04□□□□□ -1.44
CDKL5-201ENST00000379989 FAM231DQ6ZW35 169 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 CEND1Q8N111 149 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 RPEQ96AT9 228 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 DNAJC30Q96LL9 226 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 TPPP3Q9BW30 176 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 TTTY13Q9BZ97 58 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 HEYLQ9NQ87 328 aaPredicted RBP6.04□□□□□ -1.44
CDKL5-201ENST00000379989 TRAV4A0A0B4J268 109 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 HSPB6O14558 160 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 ERVK11-1P61568 191 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 MZT1Q08AG7 82 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 LGALS9BQ3B8N2 356 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 TTC32Q5I0X7 151 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 LGALS9CQ6DKI2 356 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 IGFL3Q6UXB1 125 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 MKXQ8IYA7 352 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 Q8IYB0 196 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 OR8A1Q8NGG7 326 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 PPDPFLQ8WWR9 84 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 TMEM126AQ9H061 195 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 LOC107984640A0A0U1RRK4 108 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 MPDU1O75352 247 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 P0C879 139 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 MYOD1P15172 320 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 CACNG7P62955 275 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 RRN3P1Q2M238 152 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 SSMEM1Q8WWF3 244 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 RASL10AQ92737 203 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 SPANXA1Q9NS26 97 aa6.04□□□□□ -1.44
CDKL5-201ENST00000379989 C12orf74Q32Q52 190 aa6.03□□□□□ -1.44
CDKL5-201ENST00000379989 C20orf204Q6ZNR8 217 aa6.03□□□□□ -1.44
CDKL5-201ENST00000379989 SLC25A33Q9BSK2 321 aa6.03□□□□□ -1.44
CDKL5-201ENST00000379989 PRRG4Q9BZD6 226 aa6.03□□□□□ -1.44
CDKL5-201ENST00000379989 ONECUT1Q9UBC0 465 aa6.03□□□□□ -1.44
CDKL5-201ENST00000379989 SOX21Q9Y651 276 aaPredicted RBP6.03□□□□□ -1.44
CDKL5-201ENST00000379989 TRIOBPQ9H2D6 2365 aa6.03□□□□□ -1.44
CDKL5-201ENST00000379989 TRBV6-6A0A0A6YYG2 114 aa6.03□□□□□ -1.44
CDKL5-201ENST00000379989 TRGV5A0A0B4J1U4 118 aa6.03□□□□□ -1.44
CDKL5-201ENST00000379989 CRLF1O75462 422 aa6.03□□□□□ -1.44
CDKL5-201ENST00000379989 LINC00694P0DN24 101 aa6.03□□□□□ -1.44
CDKL5-201ENST00000379989 ZNF32P17041 273 aa6.03□□□□□ -1.44
CDKL5-201ENST00000379989 RPL7P18124 248 aaKnown RBP6.03□□□□□ -1.44
CDKL5-201ENST00000379989 NBL1P41271 181 aa6.03□□□□□ -1.44
CDKL5-201ENST00000379989 LINC00479Q96M42 142 aa6.03□□□□□ -1.44
CDKL5-201ENST00000379989 AP5S1Q9NUS5 200 aa6.03□□□□□ -1.44
CDKL5-201ENST00000379989 TCF19Q9Y242 345 aa6.03□□□□□ -1.44
CDKL5-201ENST00000379989 A0A096LNJ9 63 aa6.02□□□□□ -1.44
CDKL5-201ENST00000379989 IGKV2D-26A0A0A0MRZ7 120 aa6.02□□□□□ -1.44
CDKL5-201ENST00000379989 ZNF688P0C7X2 276 aa6.02□□□□□ -1.44
CDKL5-201ENST00000379989 MPV17P39210 176 aa6.02□□□□□ -1.44
CDKL5-201ENST00000379989 ZNF137PP52743 207 aa6.02□□□□□ -1.44
CDKL5-201ENST00000379989 RBMXL3Q8N7X1 1067 aaKnown RBP6.02□□□□□ -1.44
CDKL5-201ENST00000379989 UBTD1Q9HAC8 227 aa6.02□□□□□ -1.44
CDKL5-201ENST00000379989 APOHP02749 345 aaPredicted RBP6.02□□□□□ -1.45
CDKL5-201ENST00000379989 EVI2AP22794 236 aa6.02□□□□□ -1.45
CDKL5-201ENST00000379989 ATP5IP56385 69 aaPredicted RBP6.02□□□□□ -1.45
CDKL5-201ENST00000379989 MIR17HGQ75NE6 70 aa6.02□□□□□ -1.45
CDKL5-201ENST00000379989 C1orf159Q96HA4 380 aa6.02□□□□□ -1.45
CDKL5-201ENST00000379989 HS3ST6Q96QI5 342 aa6.02□□□□□ -1.45
CDKL5-201ENST00000379989 LINC01587Q99440 93 aa6.02□□□□□ -1.45
CDKL5-201ENST00000379989 MDFICQ9P1T7 246 aa6.02□□□□□ -1.45
CDKL5-201ENST00000379989 SDK2Q58EX2 2172 aa6.02□□□□□ -1.45
CDKL5-201ENST00000379989 MOSP00540 346 aa6.02□□□□□ -1.45
CDKL5-201ENST00000379989 FOXG1P55316 489 aaPredicted RBP6.02□□□□□ -1.45
CDKL5-201ENST00000379989 TEN1Q86WV5 123 aa6.02□□□□□ -1.45
CDKL5-201ENST00000379989 OR1L8Q8NGR8 309 aa6.02□□□□□ -1.45
CDKL5-201ENST00000379989 WDFY4Q6ZS81 3184 aa6.02□□□□□ -1.45
CDKL5-201ENST00000379989 TRBV25-1A0A075B6N4 114 aa6.01□□□□□ -1.45
CDKL5-201ENST00000379989 RFPL3SP0C7P2 107 aa6.01□□□□□ -1.45
CDKL5-201ENST00000379989 PRR30Q53SZ7 412 aaPredicted RBP6.01□□□□□ -1.45
CDKL5-201ENST00000379989 ZNF503Q96F45 646 aa6.01□□□□□ -1.45
CDKL5-201ENST00000379989 FBXL15Q9H469 300 aa6.01□□□□□ -1.45
CDKL5-201ENST00000379989 TMEM262E9PQX1 116 aa6.01□□□□□ -1.45
CDKL5-201ENST00000379989 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.01□□□□□ -1.45
CDKL5-201ENST00000379989 WISP2O76076 250 aa6.01□□□□□ -1.45
CDKL5-201ENST00000379989 FAM106CPP0CH98 169 aa6.01□□□□□ -1.45
CDKL5-201ENST00000379989 RPL30P62888 115 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms