RNA–Protein interactions for RNA: ENST00000378676.1

SHROOM1-202, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHROOM1, Length 2,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-202ENST00000378676 LINC00322Q6ZN03 302 aaPredicted RBP15.55■□□□□ 0.08
SHROOM1-202ENST00000378676 NIT1Q86X76 327 aa15.55■□□□□ 0.08
SHROOM1-202ENST00000378676 C18orf32Q8TCD1 76 aa15.55■□□□□ 0.08
SHROOM1-202ENST00000378676 VAMP8Q9BV40 100 aa15.55■□□□□ 0.08
SHROOM1-202ENST00000378676 SIAH2O43255 324 aa15.54■□□□□ 0.08
SHROOM1-202ENST00000378676 GRNP28799 593 aaKnown RBP15.54■□□□□ 0.08
SHROOM1-202ENST00000378676 FAM19A2Q8N3H0 131 aa15.54■□□□□ 0.08
SHROOM1-202ENST00000378676 TSKUQ8WUA8 353 aa15.54■□□□□ 0.08
SHROOM1-202ENST00000378676 KLF12Q9Y4X4 402 aa15.54■□□□□ 0.08
SHROOM1-202ENST00000378676 PTPRQQ9UMZ3 2332 aa15.54■□□□□ 0.08
SHROOM1-202ENST00000378676 SSBP4Q9BWG4 385 aaPredicted RBP15.54■□□□□ 0.08
SHROOM1-202ENST00000378676 ZFP30Q9Y2G7 519 aa15.54■□□□□ 0.08
SHROOM1-202ENST00000378676 HIGD1CA8MV81 97 aa15.53■□□□□ 0.08
SHROOM1-202ENST00000378676 COL5A1-AS1Q5SY13 56 aa15.53■□□□□ 0.08
SHROOM1-202ENST00000378676 RASL11AQ6T310 242 aa15.53■□□□□ 0.08
SHROOM1-202ENST00000378676 SRSF12Q8WXF0 261 aaKnown RBP15.53■□□□□ 0.08
SHROOM1-202ENST00000378676 PPIAL4CA0A0B4J2A2 164 aa15.53■□□□□ 0.08
SHROOM1-202ENST00000378676 DIRC3C9JPN6 131 aa15.53■□□□□ 0.08
SHROOM1-202ENST00000378676 K7ENP7 123 aa15.53■□□□□ 0.08
SHROOM1-202ENST00000378676 PPIAL4GP0DN37 164 aa15.53■□□□□ 0.08
SHROOM1-202ENST00000378676 HIST1H1EP10412 219 aaKnown RBP15.53■□□□□ 0.08
SHROOM1-202ENST00000378676 PAX2Q02962 417 aa15.53■□□□□ 0.08
SHROOM1-202ENST00000378676 LDLRAD2Q5SZI1 272 aa15.53■□□□□ 0.08
SHROOM1-202ENST00000378676 VKORC1Q9BQB6 163 aa15.53■□□□□ 0.08
SHROOM1-202ENST00000378676 MLST8Q9BVC4 326 aa15.53■□□□□ 0.08
SHROOM1-202ENST00000378676 Q9H3A6 140 aa15.53■□□□□ 0.08
SHROOM1-202ENST00000378676 TPRP12270 2363 aaKnown RBP15.53■□□□□ 0.08
SHROOM1-202ENST00000378676 SPTBN4Q9H254 2564 aa15.52■□□□□ 0.08
SHROOM1-202ENST00000378676 FAM90A27PA6NNH2 459 aa15.52■□□□□ 0.08
SHROOM1-202ENST00000378676 PLP1P60201 277 aa15.52■□□□□ 0.08
SHROOM1-202ENST00000378676 RBPJQ06330 500 aa15.52■□□□□ 0.08
SHROOM1-202ENST00000378676 IGLC1P0CG04 106 aa15.51■□□□□ 0.07
SHROOM1-202ENST00000378676 GPR6P46095 362 aaPredicted RBP15.51■□□□□ 0.07
SHROOM1-202ENST00000378676 LYZP61626 148 aa15.51■□□□□ 0.07
SHROOM1-202ENST00000378676 TCF24Q7RTU0 167 aa15.51■□□□□ 0.07
SHROOM1-202ENST00000378676 MUC15Q8N387 334 aa15.51■□□□□ 0.07
SHROOM1-202ENST00000378676 C8orf46Q8TAG6 207 aa15.51■□□□□ 0.07
SHROOM1-202ENST00000378676 IGFBPL1Q8WX77 278 aa15.51■□□□□ 0.07
SHROOM1-202ENST00000378676 RPEQ96AT9 228 aa15.51■□□□□ 0.07
SHROOM1-202ENST00000378676 GPR82Q96P67 336 aa15.51■□□□□ 0.07
SHROOM1-202ENST00000378676 PSG1P11464 419 aa15.51■□□□□ 0.07
SHROOM1-202ENST00000378676 CAMPP49913 170 aa15.51■□□□□ 0.07
SHROOM1-202ENST00000378676 Q71RC1 249 aaPredicted RBP15.51■□□□□ 0.07
SHROOM1-202ENST00000378676 C5orf17Q8NAS9 161 aa15.51■□□□□ 0.07
SHROOM1-202ENST00000378676 ANKHD1Q8IWZ3 2542 aaKnown RBP15.51■□□□□ 0.07
SHROOM1-202ENST00000378676 A0A1B0GXF2 115 aa15.5■□□□□ 0.07
SHROOM1-202ENST00000378676 TOMM40O96008 361 aa15.5■□□□□ 0.07
SHROOM1-202ENST00000378676 TCRAP04437 139 aa15.5■□□□□ 0.07
SHROOM1-202ENST00000378676 C3orf79P0CE67 100 aa15.5■□□□□ 0.07
SHROOM1-202ENST00000378676 NTF3P20783 257 aa15.5■□□□□ 0.07
SHROOM1-202ENST00000378676 CHRDL1Q9BU40 450 aa15.5■□□□□ 0.07
SHROOM1-202ENST00000378676 HIGD1AQ9Y241 93 aa15.5■□□□□ 0.07
SHROOM1-202ENST00000378676 LY6LH3BQJ8 138 aa15.5■□□□□ 0.07
SHROOM1-202ENST00000378676 I3L2K1 104 aa15.5■□□□□ 0.07
SHROOM1-202ENST00000378676 LTAP01374 205 aa15.49■□□□□ 0.07
SHROOM1-202ENST00000378676 FMC1Q96HJ9 113 aa15.49■□□□□ 0.07
SHROOM1-202ENST00000378676 RPP21Q9H633 154 aaKnown RBP15.49■□□□□ 0.07
SHROOM1-202ENST00000378676 MRPL27Q9P0M9 148 aaKnown RBP15.49■□□□□ 0.07
SHROOM1-202ENST00000378676 ONECUT1Q9UBC0 465 aa15.49■□□□□ 0.07
SHROOM1-202ENST00000378676 ABCA4P78363 2273 aa15.49■□□□□ 0.07
SHROOM1-202ENST00000378676 LY6HO94772 140 aa15.49■□□□□ 0.07
SHROOM1-202ENST00000378676 CA7P43166 264 aa15.49■□□□□ 0.07
SHROOM1-202ENST00000378676 ZNF672Q499Z4 452 aaPredicted RBP15.49■□□□□ 0.07
SHROOM1-202ENST00000378676 SMIM12Q96EX1 92 aa15.49■□□□□ 0.07
SHROOM1-202ENST00000378676 C19orf71A6NCJ1 209 aa15.48■□□□□ 0.07
SHROOM1-202ENST00000378676 ALKBH7Q9BT30 221 aaPredicted RBP15.48■□□□□ 0.07
SHROOM1-202ENST00000378676 TRAV8-1A0A0A6YYK1 113 aa15.48■□□□□ 0.07
SHROOM1-202ENST00000378676 OR2J3O76001 311 aa15.48■□□□□ 0.07
SHROOM1-202ENST00000378676 CTRLP40313 264 aa15.48■□□□□ 0.07
SHROOM1-202ENST00000378676 PLGLAQ15195 96 aa15.48■□□□□ 0.07
SHROOM1-202ENST00000378676 GTSF1Q8WW33 167 aa15.48■□□□□ 0.07
SHROOM1-202ENST00000378676 SLC25A39Q9BZJ4 359 aaPredicted RBP15.48■□□□□ 0.07
SHROOM1-202ENST00000378676 PRSS22Q9GZN4 317 aa15.48■□□□□ 0.07
SHROOM1-202ENST00000378676 HRNRQ86YZ3 2850 aaPredicted RBP15.48■□□□□ 0.07
SHROOM1-202ENST00000378676 TIMM23O14925 209 aa15.47■□□□□ 0.07
SHROOM1-202ENST00000378676 TOX4O94842 621 aa15.47■□□□□ 0.07
SHROOM1-202ENST00000378676 RBP4P02753 201 aa15.47■□□□□ 0.07
SHROOM1-202ENST00000378676 KLF5Q13887 457 aaPredicted RBP15.47■□□□□ 0.07
SHROOM1-202ENST00000378676 OR4B1Q8NGF8 309 aa15.47■□□□□ 0.07
SHROOM1-202ENST00000378676 WNT10AQ9GZT5 417 aa15.47■□□□□ 0.07
SHROOM1-202ENST00000378676 TCF21O43680 179 aa15.47■□□□□ 0.07
SHROOM1-202ENST00000378676 SAPCD1Q5SSQ6 148 aa15.47■□□□□ 0.07
SHROOM1-202ENST00000378676 ATP5L2Q7Z4Y8 100 aa15.47■□□□□ 0.07
SHROOM1-202ENST00000378676 Q86TA4 180 aa15.47■□□□□ 0.07
SHROOM1-202ENST00000378676 EXOC3-AS1Q8N2X6 119 aa15.47■□□□□ 0.07
SHROOM1-202ENST00000378676 ZNF492Q9P255 531 aa15.47■□□□□ 0.07
SHROOM1-202ENST00000378676 IGKV1-17P01599 117 aa15.46■□□□□ 0.07
SHROOM1-202ENST00000378676 COTL1Q14019 142 aa15.46■□□□□ 0.07
SHROOM1-202ENST00000378676 BATFQ16520 125 aa15.46■□□□□ 0.07
SHROOM1-202ENST00000378676 FBLN7Q53RD9 439 aa15.46■□□□□ 0.07
SHROOM1-202ENST00000378676 OR8B3Q8NGG8 313 aa15.46■□□□□ 0.06
SHROOM1-202ENST00000378676 OR2D3Q8NGH3 330 aa15.46■□□□□ 0.06
SHROOM1-202ENST00000378676 OR8B2Q96RD0 313 aa15.46■□□□□ 0.06
SHROOM1-202ENST00000378676 RASL11BQ9BPW5 248 aa15.46■□□□□ 0.06
SHROOM1-202ENST00000378676 K7EIM0 57 aa15.45■□□□□ 0.06
SHROOM1-202ENST00000378676 CD24P25063 80 aa15.45■□□□□ 0.06
SHROOM1-202ENST00000378676 CDSNQ15517 529 aa15.45■□□□□ 0.06
SHROOM1-202ENST00000378676 MMDQ15546 238 aa15.45■□□□□ 0.06
SHROOM1-202ENST00000378676 SPATA45Q537H7 98 aa15.45■□□□□ 0.06
SHROOM1-202ENST00000378676 P01737 135 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms