RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 LINC00473A8K010 186 aa12.35□□□□□ -0.43
NPHP4-201ENST00000378156 LINC01559Q495D7 138 aa12.35□□□□□ -0.43
NPHP4-201ENST00000378156 Q5PR19 223 aa12.35□□□□□ -0.43
NPHP4-201ENST00000378156 DTX1Q86Y01 620 aa12.35□□□□□ -0.43
NPHP4-201ENST00000378156 TMEM190Q8WZ59 177 aa12.35□□□□□ -0.43
NPHP4-201ENST00000378156 H3BRM9 83 aa12.34□□□□□ -0.43
NPHP4-201ENST00000378156 ATP5L2Q7Z4Y8 100 aa12.34□□□□□ -0.43
NPHP4-201ENST00000378156 SLC25A2Q9BXI2 301 aa12.34□□□□□ -0.43
NPHP4-201ENST00000378156 GTF3C1Q12789 2109 aa12.34□□□□□ -0.43
NPHP4-201ENST00000378156 NPFFR1Q9GZQ6 430 aa12.34□□□□□ -0.43
NPHP4-201ENST00000378156 NXT2Q9NPJ8 142 aaKnown RBP12.34□□□□□ -0.43
NPHP4-201ENST00000378156 TRAV3A0A0B4J244 114 aa12.34□□□□□ -0.43
NPHP4-201ENST00000378156 COL4A3Q01955 1670 aa12.33□□□□□ -0.43
NPHP4-201ENST00000378156 PF4P02776 101 aa12.33□□□□□ -0.43
NPHP4-201ENST00000378156 OR9G4Q8NGQ1 327 aa12.33□□□□□ -0.43
NPHP4-201ENST00000378156 OR13C6PQ8NH95 151 aa12.33□□□□□ -0.43
NPHP4-201ENST00000378156 GGTLC1Q9BX51 225 aa12.33□□□□□ -0.43
NPHP4-201ENST00000378156 Q9H3A6 140 aa12.33□□□□□ -0.43
NPHP4-201ENST00000378156 NPFFO15130 113 aa12.33□□□□□ -0.44
NPHP4-201ENST00000378156 CEACAM4O75871 244 aa12.33□□□□□ -0.44
NPHP4-201ENST00000378156 SPSB3Q6PJ21 355 aa12.33□□□□□ -0.44
NPHP4-201ENST00000378156 OR10W1Q8NGF6 305 aa12.33□□□□□ -0.44
NPHP4-201ENST00000378156 ANAPC13Q9BS18 74 aa12.33□□□□□ -0.44
NPHP4-201ENST00000378156 IGKV1D-17A0A075B6S4 117 aa12.33□□□□□ -0.44
NPHP4-201ENST00000378156 TCRBV4S1A1TA0A5B7 111 aa12.33□□□□□ -0.44
NPHP4-201ENST00000378156 C10orf55Q5SWW7 151 aa12.33□□□□□ -0.44
NPHP4-201ENST00000378156 PVRIGQ6DKI7 326 aa12.33□□□□□ -0.44
NPHP4-201ENST00000378156 SSBP4Q9BWG4 385 aaPredicted RBP12.33□□□□□ -0.44
NPHP4-201ENST00000378156 DPM2O94777 84 aa12.33□□□□□ -0.44
NPHP4-201ENST00000378156 RNF125Q96EQ8 232 aa12.33□□□□□ -0.44
NPHP4-201ENST00000378156 TRAV40A0A0B4J280 105 aa12.32□□□□□ -0.44
NPHP4-201ENST00000378156 M0R381 172 aa12.32□□□□□ -0.44
NPHP4-201ENST00000378156 RHOGP84095 191 aa12.32□□□□□ -0.44
NPHP4-201ENST00000378156 ZNF585BQ52M93 769 aa12.32□□□□□ -0.44
NPHP4-201ENST00000378156 IGFL3Q6UXB1 125 aa12.32□□□□□ -0.44
NPHP4-201ENST00000378156 DOCK10Q96BY6 2186 aa12.32□□□□□ -0.44
NPHP4-201ENST00000378156 PYYP10082 97 aa12.32□□□□□ -0.44
NPHP4-201ENST00000378156 LEPP41159 167 aa12.32□□□□□ -0.44
NPHP4-201ENST00000378156 SPATA31B1PQ5VZV4 182 aa12.32□□□□□ -0.44
NPHP4-201ENST00000378156 YAE1D1Q9NRH1 226 aa12.32□□□□□ -0.44
NPHP4-201ENST00000378156 EPDR1Q9UM22 224 aa12.31□□□□□ -0.44
NPHP4-201ENST00000378156 TNFRSF18Q9Y5U5 241 aa12.31□□□□□ -0.44
NPHP4-201ENST00000378156 ZGRF1Q86YA3 2104 aa12.31□□□□□ -0.44
NPHP4-201ENST00000378156 GAFA1Q96PS6 74 aa12.31□□□□□ -0.44
NPHP4-201ENST00000378156 ASCL2Q99929 193 aa12.31□□□□□ -0.44
NPHP4-201ENST00000378156 KIAA1671Q9BY89 1806 aa12.31□□□□□ -0.44
NPHP4-201ENST00000378156 FABP5P3A8MUU1 101 aa12.31□□□□□ -0.44
NPHP4-201ENST00000378156 GNG5P63218 68 aa12.31□□□□□ -0.44
NPHP4-201ENST00000378156 TSKUQ8WUA8 353 aa12.31□□□□□ -0.44
NPHP4-201ENST00000378156 PRSS22Q9GZN4 317 aa12.31□□□□□ -0.44
NPHP4-201ENST00000378156 SMPXQ9UHP9 88 aa12.31□□□□□ -0.44
NPHP4-201ENST00000378156 NOTCH2Q04721 2471 aa12.31□□□□□ -0.44
NPHP4-201ENST00000378156 ZNF503-AS2A6NEH8 195 aa12.31□□□□□ -0.44
NPHP4-201ENST00000378156 CRIM1Q9NZV1 1036 aa12.31□□□□□ -0.44
NPHP4-201ENST00000378156 PTPRQQ9UMZ3 2332 aa12.3□□□□□ -0.44
NPHP4-201ENST00000378156 HOXA3O43365 443 aaPredicted RBP12.3□□□□□ -0.44
NPHP4-201ENST00000378156 PYY3Q5JQD4 70 aa12.3□□□□□ -0.44
NPHP4-201ENST00000378156 RASL11AQ6T310 242 aa12.3□□□□□ -0.44
NPHP4-201ENST00000378156 ZNF479Q96JC4 524 aa12.3□□□□□ -0.44
NPHP4-201ENST00000378156 SPG11Q96JI7 2443 aa12.3□□□□□ -0.44
NPHP4-201ENST00000378156 LINC01549A6NIU2 74 aa12.3□□□□□ -0.44
NPHP4-201ENST00000378156 PRR30Q53SZ7 412 aaPredicted RBP12.3□□□□□ -0.44
NPHP4-201ENST00000378156 RPRMLQ8N4K4 120 aa12.3□□□□□ -0.44
NPHP4-201ENST00000378156 CYYR1Q96J86 154 aa12.3□□□□□ -0.44
NPHP4-201ENST00000378156 NUP210Q8TEM1 1887 aaPredicted RBP12.3□□□□□ -0.44
NPHP4-201ENST00000378156 NDUFA3O95167 84 aa12.3□□□□□ -0.44
NPHP4-201ENST00000378156 MYOD1P15172 320 aa12.3□□□□□ -0.44
NPHP4-201ENST00000378156 SEPSECSQ9HD40 501 aaKnown RBP12.3□□□□□ -0.44
NPHP4-201ENST00000378156 A8MWV9 139 aa12.3□□□□□ -0.44
NPHP4-201ENST00000378156 DSCR9P59020 149 aa12.3□□□□□ -0.44
NPHP4-201ENST00000378156 ERVK11-1P61568 191 aa12.3□□□□□ -0.44
NPHP4-201ENST00000378156 CACNA1AO00555 2505 aa12.3□□□□□ -0.44
NPHP4-201ENST00000378156 IGHV1-3A0A0C4DH29 117 aa12.29□□□□□ -0.44
NPHP4-201ENST00000378156 SLC25A48Q6ZT89 311 aaKnown RBP12.29□□□□□ -0.44
NPHP4-201ENST00000378156 SAMD5Q5TGI4 173 aa12.29□□□□□ -0.44
NPHP4-201ENST00000378156 LINC01551Q86U37 167 aa12.29□□□□□ -0.44
NPHP4-201ENST00000378156 GHRHP01286 108 aa12.29□□□□□ -0.44
NPHP4-201ENST00000378156 IGLV3-1P01715 115 aa12.29□□□□□ -0.44
NPHP4-201ENST00000378156 PAX1P15863 534 aa12.29□□□□□ -0.44
NPHP4-201ENST00000378156 SRSF1Q07955 248 aaKnown RBP eCLIP12.29□□□□□ -0.44
NPHP4-201ENST00000378156 GAGE13Q4V321 117 aa12.29□□□□□ -0.44
NPHP4-201ENST00000378156 FAM90A2PQ658T7 463 aa12.29□□□□□ -0.44
NPHP4-201ENST00000378156 TMEM101Q96IK0 257 aa12.29□□□□□ -0.44
NPHP4-201ENST00000378156 MGST2Q99735 147 aa12.29□□□□□ -0.44
NPHP4-201ENST00000378156 C9JCJ5 164 aa12.29□□□□□ -0.44
NPHP4-201ENST00000378156 WNT2P09544 360 aa12.29□□□□□ -0.44
NPHP4-201ENST00000378156 RIPPLY3P57055 190 aa12.29□□□□□ -0.44
NPHP4-201ENST00000378156 TRAV5A0A0B4J249 113 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 OOSP1A8MZH6 123 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 E7EQL1 145 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 IFI27L1Q96BM0 104 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 CYSLTR1Q9Y271 337 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 C15orf62A8K5M9 175 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 LY6HO94772 140 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 PAX9P55771 341 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 ORMDL2Q53FV1 153 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 TPTE2P1Q5T6R2 138 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 MINOS1Q5TGZ0 78 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 VMO1Q7Z5L0 202 aa12.28□□□□□ -0.44
NPHP4-201ENST00000378156 PIP4P1Q86T03 277 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms