RNA–Protein interactions for RNA: ENST00000377918.7

PCDH17-201, Transcript of protocadherin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDH17, Length 8,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17-201ENST00000377918 TMEM141Q96I45 108 aa12.22□□□□□ -0.45
PCDH17-201ENST00000377918 RNASE7Q9H1E1 156 aaKnown RBP12.22□□□□□ -0.45
PCDH17-201ENST00000377918 PRCDQ00LT1 54 aa12.22□□□□□ -0.45
PCDH17-201ENST00000377918 LDLRAD4O15165 306 aa12.22□□□□□ -0.45
PCDH17-201ENST00000377918 ACYP1P07311 99 aa12.22□□□□□ -0.45
PCDH17-201ENST00000377918 TPRX1Q8N7U7 411 aa12.22□□□□□ -0.45
PCDH17-201ENST00000377918 PPDPFLQ8WWR9 84 aa12.22□□□□□ -0.45
PCDH17-201ENST00000377918 ZNF138P52744 262 aa12.22□□□□□ -0.45
PCDH17-201ENST00000377918 RCHY1Q96PM5 261 aa12.21□□□□□ -0.45
PCDH17-201ENST00000377918 C1QTNF5Q9BXJ0 243 aa12.21□□□□□ -0.45
PCDH17-201ENST00000377918 TNRC6BQ9UPQ9 1833 aaKnown RBP12.21□□□□□ -0.45
PCDH17-201ENST00000377918 SNAI2O43623 268 aa12.21□□□□□ -0.45
PCDH17-201ENST00000377918 HTN3P15516 51 aa12.21□□□□□ -0.45
PCDH17-201ENST00000377918 TMEM92Q6UXU6 159 aa12.21□□□□□ -0.46
PCDH17-201ENST00000377918 NKAPP1Q8N9T2 125 aa12.21□□□□□ -0.46
PCDH17-201ENST00000377918 ZPLD1Q8TCW7 415 aa12.2□□□□□ -0.46
PCDH17-201ENST00000377918 WNT2P09544 360 aa12.2□□□□□ -0.46
PCDH17-201ENST00000377918 ST6GALNAC6Q969X2 333 aa12.2□□□□□ -0.46
PCDH17-201ENST00000377918 ZNF497Q6ZNH5 498 aa12.2□□□□□ -0.46
PCDH17-201ENST00000377918 MYF5P13349 255 aa12.2□□□□□ -0.46
PCDH17-201ENST00000377918 STPG1Q5TH74 334 aa12.2□□□□□ -0.46
PCDH17-201ENST00000377918 SMRP1Q8NCR6 262 aa12.2□□□□□ -0.46
PCDH17-201ENST00000377918 HIST1H2BLQ99880 126 aa12.2□□□□□ -0.46
PCDH17-201ENST00000377918 C18orf12Q96KH6 178 aa12.19□□□□□ -0.46
PCDH17-201ENST00000377918 GTSF1LQ9H1H1 148 aa12.19□□□□□ -0.46
PCDH17-201ENST00000377918 FAM223BA6NKX1 122 aa12.19□□□□□ -0.46
PCDH17-201ENST00000377918 ERVH48-1M5A8F1 160 aa12.19□□□□□ -0.46
PCDH17-201ENST00000377918 FAM223AQ8IWN6 122 aa12.19□□□□□ -0.46
PCDH17-201ENST00000377918 FBXL15Q9H469 300 aa12.19□□□□□ -0.46
PCDH17-201ENST00000377918 K7EMI3 77 aa12.19□□□□□ -0.46
PCDH17-201ENST00000377918 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.19□□□□□ -0.46
PCDH17-201ENST00000377918 F8VVB4 439 aa12.19□□□□□ -0.46
PCDH17-201ENST00000377918 F8VWA3 439 aa12.19□□□□□ -0.46
PCDH17-201ENST00000377918 EFNB3Q15768 340 aa12.19□□□□□ -0.46
PCDH17-201ENST00000377918 DLEU1O43261 78 aa12.19□□□□□ -0.46
PCDH17-201ENST00000377918 COLCA1Q6ZS62 124 aa12.19□□□□□ -0.46
PCDH17-201ENST00000377918 ZNF826PQ6ZT77 177 aa12.19□□□□□ -0.46
PCDH17-201ENST00000377918 PRIMA1Q86XR5 153 aa12.19□□□□□ -0.46
PCDH17-201ENST00000377918 SMIM20Q8N5G0 67 aa12.19□□□□□ -0.46
PCDH17-201ENST00000377918 RNASE6Q93091 150 aaKnown RBP12.19□□□□□ -0.46
PCDH17-201ENST00000377918 PSG1P11464 419 aa12.18□□□□□ -0.46
PCDH17-201ENST00000377918 CCL4P13236 92 aa12.18□□□□□ -0.46
PCDH17-201ENST00000377918 TMEM133Q9H2Q1 129 aa12.18□□□□□ -0.46
PCDH17-201ENST00000377918 ZNF561-AS1K7EIQ3 104 aa12.18□□□□□ -0.46
PCDH17-201ENST00000377918 SNRPCP09234 159 aaKnown RBP12.18□□□□□ -0.46
PCDH17-201ENST00000377918 MPZP25189 248 aa12.18□□□□□ -0.46
PCDH17-201ENST00000377918 TEX38Q6PEX7 206 aa12.18□□□□□ -0.46
PCDH17-201ENST00000377918 RFNGQ9Y644 331 aa12.18□□□□□ -0.46
PCDH17-201ENST00000377918 KIR3DS1Q14943 382 aa12.18□□□□□ -0.46
PCDH17-201ENST00000377918 C9orf139Q6ZV77 190 aa12.18□□□□□ -0.46
PCDH17-201ENST00000377918 LIMS2Q7Z4I7 341 aa12.18□□□□□ -0.46
PCDH17-201ENST00000377918 METRNQ9UJH8 293 aa12.18□□□□□ -0.46
PCDH17-201ENST00000377918 CCL3L1P16619 93 aa12.18□□□□□ -0.46
PCDH17-201ENST00000377918 ZNF525Q8N782 197 aa12.18□□□□□ -0.46
PCDH17-201ENST00000377918 C7orf69Q9H7B7 122 aa12.18□□□□□ -0.46
PCDH17-201ENST00000377918 PRTN3P24158 256 aa12.17□□□□□ -0.46
PCDH17-201ENST00000377918 STPG4Q8N801 248 aa12.17□□□□□ -0.46
PCDH17-201ENST00000377918 TRPT1Q86TN4 253 aaKnown RBP12.17□□□□□ -0.46
PCDH17-201ENST00000377918 RNF114Q9Y508 228 aa12.17□□□□□ -0.46
PCDH17-201ENST00000377918 PRR19A6NJB7 356 aa12.17□□□□□ -0.46
PCDH17-201ENST00000377918 REPIN1Q9BWE0 567 aaKnown RBP12.17□□□□□ -0.46
PCDH17-201ENST00000377918 EVI2AP22794 236 aa12.17□□□□□ -0.46
PCDH17-201ENST00000377918 TRAV41A0A0B4J266 112 aa12.17□□□□□ -0.46
PCDH17-201ENST00000377918 C9JAW5 83 aa12.17□□□□□ -0.46
PCDH17-201ENST00000377918 GZMMP51124 257 aa12.17□□□□□ -0.46
PCDH17-201ENST00000377918 SEC61GP60059 68 aa12.17□□□□□ -0.46
PCDH17-201ENST00000377918 TFF3Q07654 80 aa12.17□□□□□ -0.46
PCDH17-201ENST00000377918 TPTE2P1Q5T6R2 138 aa12.17□□□□□ -0.46
PCDH17-201ENST00000377918 SONP18583 2426 aaKnown RBP12.17□□□□□ -0.46
PCDH17-201ENST00000377918 C17orf100A8MU93 164 aa12.17□□□□□ -0.46
PCDH17-201ENST00000377918 HRKO00198 91 aa12.17□□□□□ -0.46
PCDH17-201ENST00000377918 LINC01565O15544 149 aa12.17□□□□□ -0.46
PCDH17-201ENST00000377918 GUSBP1Q15486 140 aa12.17□□□□□ -0.46
PCDH17-201ENST00000377918 FOXS1O43638 330 aa12.16□□□□□ -0.46
PCDH17-201ENST00000377918 SYS1-DBNDD2H3BUS1 97 aa12.16□□□□□ -0.46
PCDH17-201ENST00000377918 SLAQ13239 276 aa12.16□□□□□ -0.46
PCDH17-201ENST00000377918 TRAV8-3A0A0A6YYJ7 113 aa12.16□□□□□ -0.46
PCDH17-201ENST00000377918 GATA2P23769 480 aaPredicted RBP12.16□□□□□ -0.46
PCDH17-201ENST00000377918 PCOLCEQ15113 449 aa12.16□□□□□ -0.46
PCDH17-201ENST00000377918 ACTL10Q5JWF8 245 aa12.16□□□□□ -0.46
PCDH17-201ENST00000377918 RNF166Q96A37 237 aaPredicted RBP12.16□□□□□ -0.46
PCDH17-201ENST00000377918 CEACAM1P13688 526 aa12.15□□□□□ -0.46
PCDH17-201ENST00000377918 MIR17HGQ75NE6 70 aa12.15□□□□□ -0.46
PCDH17-201ENST00000377918 RPL39P5Q59GN2 51 aa12.15□□□□□ -0.46
PCDH17-201ENST00000377918 OR11H6Q8NGC7 330 aa12.15□□□□□ -0.46
PCDH17-201ENST00000377918 FAM231BA6NCW3 169 aa12.15□□□□□ -0.46
PCDH17-201ENST00000377918 MORN2Q502X0 79 aa12.15□□□□□ -0.46
PCDH17-201ENST00000377918 MBNL3Q9NUK0 354 aaKnown RBP12.15□□□□□ -0.46
PCDH17-201ENST00000377918 CD300EQ496F6 205 aaPredicted RBP12.15□□□□□ -0.46
PCDH17-201ENST00000377918 ZNF883P0CG24 379 aa12.15□□□□□ -0.46
PCDH17-201ENST00000377918 RBM3P98179 157 aaKnown RBP12.15□□□□□ -0.46
PCDH17-201ENST00000377918 THAP8Q8NA92 274 aa12.15□□□□□ -0.46
PCDH17-201ENST00000377918 IGHV1-24A0A0C4DH33 117 aa12.15□□□□□ -0.46
PCDH17-201ENST00000377918 TRBV6-7A0A0A0MS04 114 aa12.15□□□□□ -0.47
PCDH17-201ENST00000377918 BSPH1Q075Z2 132 aa12.15□□□□□ -0.47
PCDH17-201ENST00000377918 PLA2G2FQ9BZM2 168 aa12.15□□□□□ -0.47
PCDH17-201ENST00000377918 PTPRSQ13332 1948 aa12.15□□□□□ -0.47
PCDH17-201ENST00000377918 CRLF1O75462 422 aa12.14□□□□□ -0.47
PCDH17-201ENST00000377918 ST6GALNAC3Q8NDV1 305 aa12.14□□□□□ -0.47
PCDH17-201ENST00000377918 A0A0G2JK05 382 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms