RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 MRPL41Q8IXM3 137 aaKnown RBP7.59□□□□□ -1.19
TRIM39-202ENST00000376659 GNB4Q9HAV0 340 aa7.59□□□□□ -1.19
TRIM39-202ENST00000376659 ZNF705FA8MVS1 300 aaPredicted RBP7.59□□□□□ -1.19
TRIM39-202ENST00000376659 MOSP00540 346 aa7.59□□□□□ -1.19
TRIM39-202ENST00000376659 ZNF705DP0CH99 300 aaPredicted RBP7.59□□□□□ -1.19
TRIM39-202ENST00000376659 ZNF705BP0CI00 300 aaPredicted RBP7.59□□□□□ -1.19
TRIM39-202ENST00000376659 CTRLP40313 264 aa7.59□□□□□ -1.19
TRIM39-202ENST00000376659 IQCJQ1A5X6 159 aa7.59□□□□□ -1.19
TRIM39-202ENST00000376659 RASL11AQ6T310 242 aa7.59□□□□□ -1.19
TRIM39-202ENST00000376659 RNF5Q99942 180 aa7.59□□□□□ -1.19
TRIM39-202ENST00000376659 IZUMO1RA6ND01 250 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 OR7C2O60412 319 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 IGKV1-17P01599 117 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 SUMO1P63165 101 aaKnown RBP7.58□□□□□ -1.2
TRIM39-202ENST00000376659 UBE2L3P68036 154 aaKnown RBP7.58□□□□□ -1.2
TRIM39-202ENST00000376659 RBPJQ06330 500 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 SLAQ13239 276 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 FAM120AOSQ5T036 256 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 C1orf194Q5T5A4 169 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 OR1L4Q8NGR5 311 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 LINC01560Q8TB33 94 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 TMEM18Q96B42 140 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 PAXXQ9BUH6 204 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 CLEC7AQ9BXN2 247 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 IGHV3-72A0A0B4J1Y9 119 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 CORTO00230 105 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 OR2J3O76001 311 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 GNG5P63218 68 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 KLF5Q13887 457 aaPredicted RBP7.58□□□□□ -1.2
TRIM39-202ENST00000376659 VMA21Q3ZAQ7 101 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 GATD1Q8NB37 220 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 VSTM5A8MXK1 200 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 AMY1AP04745 511 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 CD3EP07766 207 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 IGLC2P0DOY2 106 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 TDRG1Q3Y452 100 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 IBA57Q5T440 356 aaKnown RBP7.58□□□□□ -1.2
TRIM39-202ENST00000376659 PPP1R27Q86WC6 154 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 NIT1Q86X76 327 aa7.58□□□□□ -1.2
TRIM39-202ENST00000376659 ZNF48Q96MX3 618 aaPredicted RBP7.58□□□□□ -1.2
TRIM39-202ENST00000376659 WI2-2373I1.2A0A1W2PRP0 233 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 CA1P00915 261 aaPredicted RBP7.57□□□□□ -1.2
TRIM39-202ENST00000376659 DYNAPQ8N1N2 210 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 MUC15Q8N387 334 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 GTSF1Q8WW33 167 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 ZNF586Q9NXT0 402 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 FBXL7Q9UJT9 491 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 APC2O95996 2303 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 CRYBG3Q68DQ2 2970 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 TOMM40O96008 361 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 EGR2P11161 476 aaPredicted RBP7.57□□□□□ -1.2
TRIM39-202ENST00000376659 IER3P46695 156 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 RIPPLY3P57055 190 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 NHLRC2Q8NBF2 726 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 IGFBPL1Q8WX77 278 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 ZNF492Q9P255 531 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 EPDR1Q9UM22 224 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 CEP295Q9C0D2 2601 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 A0A1W2PS18 150 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 COX7A2P2O60397 106 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 RPL27AP46776 148 aaKnown RBP7.57□□□□□ -1.2
TRIM39-202ENST00000376659 FOXC1Q12948 553 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 EBI3Q14213 229 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 DTX2Q86UW9 622 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 NUP35Q8NFH5 326 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 TNFRSF19Q9NS68 423 aa7.57□□□□□ -1.2
TRIM39-202ENST00000376659 MT-ND6P03923 174 aa7.56□□□□□ -1.2
TRIM39-202ENST00000376659 CMTM2Q8TAZ6 248 aa7.56□□□□□ -1.2
TRIM39-202ENST00000376659 GRAMD2BQ96HH9 432 aa7.56□□□□□ -1.2
TRIM39-202ENST00000376659 SPTAN1Q13813 2472 aaKnown RBP7.56□□□□□ -1.2
TRIM39-202ENST00000376659 SNURFLB1AK76 121 aa7.56□□□□□ -1.2
TRIM39-202ENST00000376659 H3BRN7 92 aa7.56□□□□□ -1.2
TRIM39-202ENST00000376659 GPX1P07203 203 aa7.56□□□□□ -1.2
TRIM39-202ENST00000376659 UBE2V1Q13404 147 aa7.56□□□□□ -1.2
TRIM39-202ENST00000376659 CT83Q5H943 113 aa7.56□□□□□ -1.2
TRIM39-202ENST00000376659 KCNS1Q96KK3 526 aa7.56□□□□□ -1.2
TRIM39-202ENST00000376659 NAGKQ9UJ70 344 aa7.56□□□□□ -1.2
TRIM39-202ENST00000376659 PCNX1Q96RV3 2341 aa7.56□□□□□ -1.2
TRIM39-202ENST00000376659 ABCA2Q9BZC7 2435 aa7.56□□□□□ -1.2
TRIM39-202ENST00000376659 TRAV34A0A0B4J273 112 aa7.56□□□□□ -1.2
TRIM39-202ENST00000376659 PPIAL4CA0A0B4J2A2 164 aa7.56□□□□□ -1.2
TRIM39-202ENST00000376659 PPIAL4GP0DN37 164 aa7.56□□□□□ -1.2
TRIM39-202ENST00000376659 BCL6BQ8N143 479 aaPredicted RBP7.56□□□□□ -1.2
TRIM39-202ENST00000376659 SRSF12Q8WXF0 261 aaKnown RBP7.56□□□□□ -1.2
TRIM39-202ENST00000376659 FANCD2OSQ96PS1 177 aa7.56□□□□□ -1.2
TRIM39-202ENST00000376659 DYNLRB1Q9NP97 96 aa7.56□□□□□ -1.2
TRIM39-202ENST00000376659 NGBQ9NPG2 151 aa7.56□□□□□ -1.2
TRIM39-202ENST00000376659 CD33P20138 364 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 SUB1P53999 127 aaKnown RBP eCLIP7.55□□□□□ -1.2
TRIM39-202ENST00000376659 PAFAH1B2P68402 229 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 NDPQ00604 133 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 SCGB2A2Q13296 93 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 IGLV11-55A0A075B6I3 123 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 M0R1W7 72 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 LY6HO94772 140 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 COX8CQ7Z4L0 72 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 Q86TA4 180 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 KIR3DL3Q8N743 410 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 C18orf32Q8TCD1 76 aa7.55□□□□□ -1.2
TRIM39-202ENST00000376659 TSKUQ8WUA8 353 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms