RNA–Protein interactions for RNA: ENST00000376387.4

TM9SF2-201, Transcript of transmembrane 9 superfamily member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2-201ENST00000376387 CT45A5P0DMU8 189 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 CT45A7P0DMV0 189 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 PRB4P10163 310 aaPredicted RBP9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 CD69Q07108 199 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 GTSF1Q8WW33 167 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 TANC2Q9HCD6 1990 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 RAI1Q7Z5J4 1906 aaPredicted RBP9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 PLXNB1O43157 2135 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 A0A087X0K7 114 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 H3BTX0 84 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 RHOGP84095 191 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 RASL11AQ6T310 242 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 C12orf54Q6X4T0 127 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 Q6ZT83 130 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 BLNKQ8WV28 456 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 PAXXQ9BUH6 204 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 SAA1P0DJI8 122 aaPredicted RBP9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 PAX2Q02962 417 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 FXYD5Q96DB9 178 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 PGLYRP4Q96LB8 373 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 C19orf24Q9BVV8 132 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 PRNDQ9UKY0 176 aa9.28□□□□□ -0.92
TM9SF2-201ENST00000376387 C2orf83Q53S99 150 aa9.27□□□□□ -0.92
TM9SF2-201ENST00000376387 FNDC4Q9H6D8 234 aaPredicted RBP9.27□□□□□ -0.92
TM9SF2-201ENST00000376387 VPREB3Q9UKI3 123 aa9.27□□□□□ -0.92
TM9SF2-201ENST00000376387 IGHV1-18A0A0C4DH31 117 aa9.27□□□□□ -0.93
TM9SF2-201ENST00000376387 NPIPB5A8MRT5 1133 aa9.27□□□□□ -0.93
TM9SF2-201ENST00000376387 FSTL3O95633 263 aa9.27□□□□□ -0.93
TM9SF2-201ENST00000376387 DEFB108BQ8NET1 73 aa9.27□□□□□ -0.93
TM9SF2-201ENST00000376387 INTS1Q8N201 2190 aaKnown RBP9.27□□□□□ -0.93
TM9SF2-201ENST00000376387 KBTBD11-OT1A0A1B0GTJ5 212 aa9.27□□□□□ -0.93
TM9SF2-201ENST00000376387 COX7A2P2O60397 106 aa9.27□□□□□ -0.93
TM9SF2-201ENST00000376387 C10orf55Q5SWW7 151 aa9.27□□□□□ -0.93
TM9SF2-201ENST00000376387 NEU4Q8WWR8 484 aaPredicted RBP9.27□□□□□ -0.93
TM9SF2-201ENST00000376387 ZNF835Q9Y2P0 537 aa9.27□□□□□ -0.93
TM9SF2-201ENST00000376387 CRXO43186 299 aaPredicted RBP9.26□□□□□ -0.93
TM9SF2-201ENST00000376387 SPRY3O43610 288 aa9.26□□□□□ -0.93
TM9SF2-201ENST00000376387 SRSF1Q07955 248 aaKnown RBP eCLIP9.26□□□□□ -0.935e-7■□□□□ 9.9
TM9SF2-201ENST00000376387 DEFB125Q8N687 156 aa9.26□□□□□ -0.93
TM9SF2-201ENST00000376387 NPIPB3Q92617 1050 aa9.26□□□□□ -0.93
TM9SF2-201ENST00000376387 ST20Q9HBF5 79 aa9.26□□□□□ -0.93
TM9SF2-201ENST00000376387 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.26□□□□□ -0.93
TM9SF2-201ENST00000376387 TRAV8-6A0A0B4J262 113 aa9.26□□□□□ -0.93
TM9SF2-201ENST00000376387 LEPROTL1O95214 131 aa9.26□□□□□ -0.93
TM9SF2-201ENST00000376387 MOSP00540 346 aa9.26□□□□□ -0.93
TM9SF2-201ENST00000376387 KIR2DL2P43627 348 aaPredicted RBP9.26□□□□□ -0.93
TM9SF2-201ENST00000376387 PSG9Q00887 426 aa9.26□□□□□ -0.93
TM9SF2-201ENST00000376387 POU2AF1Q16633 256 aa9.26□□□□□ -0.93
TM9SF2-201ENST00000376387 RTL8BQ17RB0 113 aa9.26□□□□□ -0.93
TM9SF2-201ENST00000376387 C10orf113Q5VZT2 155 aa9.26□□□□□ -0.93
TM9SF2-201ENST00000376387 SIGMAR1Q99720 223 aa9.26□□□□□ -0.93
TM9SF2-201ENST00000376387 MRPL32Q9BYC8 188 aaKnown RBP9.26□□□□□ -0.93
TM9SF2-201ENST00000376387 ZNF257Q9Y2Q1 563 aa9.26□□□□□ -0.93
TM9SF2-201ENST00000376387 CSMD1Q96PZ7 3565 aa9.26□□□□□ -0.93
TM9SF2-201ENST00000376387 IGKV1D-37A0A075B6S9 117 aa9.25□□□□□ -0.93
TM9SF2-201ENST00000376387 HIST1H1EP10412 219 aaKnown RBP9.25□□□□□ -0.93
TM9SF2-201ENST00000376387 HBBP68871 147 aa9.25□□□□□ -0.93
TM9SF2-201ENST00000376387 ANXA2RQ3ZCQ2 193 aa9.25□□□□□ -0.93
TM9SF2-201ENST00000376387 SLC25A34Q6PIV7 304 aa9.25□□□□□ -0.93
TM9SF2-201ENST00000376387 SCRT2Q9NQ03 307 aa9.25□□□□□ -0.93
TM9SF2-201ENST00000376387 REG1BP48304 166 aa9.25□□□□□ -0.93
TM9SF2-201ENST00000376387 SRSF6Q13247 344 aaKnown RBP9.25□□□□□ -0.93
TM9SF2-201ENST00000376387 C9orf106Q8NAJ2 232 aa9.25□□□□□ -0.93
TM9SF2-201ENST00000376387 ZDBF2Q9HCK1 2354 aa9.25□□□□□ -0.93
TM9SF2-201ENST00000376387 GAGE12BA1L429 117 aa9.25□□□□□ -0.93
TM9SF2-201ENST00000376387 SLC25A5P05141 298 aaKnown RBP9.25□□□□□ -0.93
TM9SF2-201ENST00000376387 ACP1P24666 158 aa9.25□□□□□ -0.93
TM9SF2-201ENST00000376387 MBNL2Q5VZF2 373 aaKnown RBP9.25□□□□□ -0.93
TM9SF2-201ENST00000376387 OR1L8Q8NGR8 309 aa9.25□□□□□ -0.93
TM9SF2-201ENST00000376387 PGPA6NDG6 321 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 CGB1A6NKQ9 187 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 TSPAN13O95857 204 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 CSN3P07498 182 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 MYCNOSP40205 109 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 LINC00305Q7Z4B0 112 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 ITLN1Q8WWA0 313 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 RNF183Q96D59 192 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 ZNF714Q96N38 554 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 KLK10O43240 276 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 LAMTOR5O43504 91 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 WT1-ASQ06250 92 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 PEAR1Q5VY43 1037 aaPredicted RBP9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 FAM216BQ8N7L0 139 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 SIRPDQ9H106 197 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 EPDR1Q9UM22 224 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 GPR179Q6PRD1 2367 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 ORM2P19652 201 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 TEX45Q8NA69 505 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 CCL13Q99616 98 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 RPP21Q9H633 154 aaKnown RBP9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 NDUFA4L2Q9NRX3 87 aa9.24□□□□□ -0.93
TM9SF2-201ENST00000376387 DLL1O00548 723 aa9.23□□□□□ -0.93
TM9SF2-201ENST00000376387 TCTAP57738 103 aa9.23□□□□□ -0.93
TM9SF2-201ENST00000376387 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.23□□□□□ -0.93
TM9SF2-201ENST00000376387 MRPL20Q9BYC9 149 aaKnown RBP9.23□□□□□ -0.93
TM9SF2-201ENST00000376387 CSDC2Q9Y534 153 aaKnown RBP9.23□□□□□ -0.93
TM9SF2-201ENST00000376387 ZZEF1O43149 2961 aa9.23□□□□□ -0.93
TM9SF2-201ENST00000376387 PRR33A8MZF0 331 aa9.23□□□□□ -0.93
TM9SF2-201ENST00000376387 NCR2O95944 276 aa9.23□□□□□ -0.93
TM9SF2-201ENST00000376387 LHBP01229 141 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms