RNA–Protein interactions for RNA: ENST00000374481.7

CD28-202, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 4,526 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-202ENST00000374481 FOXI3A8MTJ6 420 aaPredicted RBP8.41□□□□□ -1.06
CD28-202ENST00000374481 DLX6P56179 175 aa8.41□□□□□ -1.06
CD28-202ENST00000374481 PEAR1Q5VY43 1037 aaPredicted RBP8.41□□□□□ -1.06
CD28-202ENST00000374481 OTORQ9NRC9 128 aa8.41□□□□□ -1.06
CD28-202ENST00000374481 RNF114Q9Y508 228 aa8.41□□□□□ -1.06
CD28-202ENST00000374481 TRAV40A0A0B4J280 105 aa8.41□□□□□ -1.06
CD28-202ENST00000374481 TCRBV4S1A1TA0A5B7 111 aa8.41□□□□□ -1.06
CD28-202ENST00000374481 FAM90A9PA6NNJ1 464 aa8.41□□□□□ -1.06
CD28-202ENST00000374481 ARMS2P0C7Q2 107 aa8.41□□□□□ -1.06
CD28-202ENST00000374481 DUTP33316 252 aaKnown RBP8.41□□□□□ -1.06
CD28-202ENST00000374481 FSCN3Q9NQT6 498 aa8.41□□□□□ -1.06
CD28-202ENST00000374481 PSG8Q9UQ74 426 aa8.41□□□□□ -1.06
CD28-202ENST00000374481 WNT9BO14905 357 aa8.41□□□□□ -1.06
CD28-202ENST00000374481 MFAP4P55083 255 aa8.41□□□□□ -1.06
CD28-202ENST00000374481 C20orf204Q6ZNR8 217 aa8.41□□□□□ -1.06
CD28-202ENST00000374481 AMN1Q8IY45 258 aa8.41□□□□□ -1.06
CD28-202ENST00000374481 DCTN5Q9BTE1 182 aa8.41□□□□□ -1.06
CD28-202ENST00000374481 C1RLQ9NZP8 487 aa8.41□□□□□ -1.06
CD28-202ENST00000374481 TMEM42Q69YG0 159 aa8.41□□□□□ -1.06
CD28-202ENST00000374481 SRXN1Q9BYN0 137 aa8.41□□□□□ -1.06
CD28-202ENST00000374481 GFRA4Q9GZZ7 299 aa8.41□□□□□ -1.06
CD28-202ENST00000374481 TCRAP04437 139 aa8.4□□□□□ -1.06
CD28-202ENST00000374481 PLNP26678 52 aa8.4□□□□□ -1.06
CD28-202ENST00000374481 C15orf53Q8NAA6 179 aa8.4□□□□□ -1.06
CD28-202ENST00000374481 FLVCR1-AS1Q8TAF5 88 aa8.4□□□□□ -1.06
CD28-202ENST00000374481 NPIPB11E5RHQ5 1161 aa8.4□□□□□ -1.06
CD28-202ENST00000374481 MT-ATP8P03928 68 aa8.4□□□□□ -1.06
CD28-202ENST00000374481 FOXF2Q12947 444 aa8.4□□□□□ -1.06
CD28-202ENST00000374481 TAL2Q16559 108 aa8.4□□□□□ -1.06
CD28-202ENST00000374481 GAGE2AQ6NT46 116 aa8.4□□□□□ -1.06
CD28-202ENST00000374481 GCSAMQ8N6F7 178 aa8.4□□□□□ -1.06
CD28-202ENST00000374481 IGKV3D-11A0A0A0MRZ8 115 aa8.4□□□□□ -1.07
CD28-202ENST00000374481 FGFBP3Q8TAT2 258 aa8.4□□□□□ -1.07
CD28-202ENST00000374481 TRBV6-6A0A0A6YYG2 114 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 CT83Q5H943 113 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 Q6ZUT4 128 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 RAX2Q96IS3 184 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 C11orf1Q9H5F2 150 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 FAM90A27PA6NNH2 459 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 TNFRSF1AP19438 455 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 SRSF1Q07955 248 aaKnown RBP eCLIP8.39□□□□□ -1.07
CD28-202ENST00000374481 ATXN8Q156A1 80 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 LYZL1Q6UWQ5 148 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 NEGR1Q7Z3B1 354 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 C3orf56Q8N813 242 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 TMEM126AQ9H061 195 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 CFHR2P36980 270 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 OSR1Q8TAX0 266 aaPredicted RBP8.39□□□□□ -1.07
CD28-202ENST00000374481 GLMPQ8WWB7 406 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 TMEM158Q8WZ71 300 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 SPANXB1Q9NS25 103 aaPredicted RBP8.39□□□□□ -1.07
CD28-202ENST00000374481 PI4KAP42356 2102 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 SMKR1H3BMG3 65 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 EFNA2O43921 213 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 PMVKQ15126 192 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 PAPPA-AS1Q5QFB9 102 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 ZNF329Q86UD4 541 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 NABP1Q96AH0 204 aa8.39□□□□□ -1.07
CD28-202ENST00000374481 TRAV3A0A0B4J244 114 aa8.38□□□□□ -1.07
CD28-202ENST00000374481 NDUFB3O43676 98 aa8.38□□□□□ -1.07
CD28-202ENST00000374481 LINC00205P59089 165 aa8.38□□□□□ -1.07
CD28-202ENST00000374481 C5orf64Q2M2E5 130 aa8.38□□□□□ -1.07
CD28-202ENST00000374481 NGBQ9NPG2 151 aa8.38□□□□□ -1.07
CD28-202ENST00000374481 DKK2Q9UBU2 259 aa8.38□□□□□ -1.07
CD28-202ENST00000374481 TRBV25-1A0A075B6N4 114 aa8.38□□□□□ -1.07
CD28-202ENST00000374481 LINC00473A8K010 186 aa8.38□□□□□ -1.07
CD28-202ENST00000374481 M0R1B8 84 aa8.38□□□□□ -1.07
CD28-202ENST00000374481 SLC25A20O43772 301 aa8.38□□□□□ -1.07
CD28-202ENST00000374481 ASIPP42127 132 aa8.38□□□□□ -1.07
CD28-202ENST00000374481 TMEM78Q5T7P6 136 aa8.38□□□□□ -1.07
CD28-202ENST00000374481 TEN1Q86WV5 123 aa8.38□□□□□ -1.07
CD28-202ENST00000374481 PRCDQ00LT1 54 aa8.38□□□□□ -1.07
CD28-202ENST00000374481 OR11H6Q8NGC7 330 aa8.38□□□□□ -1.07
CD28-202ENST00000374481 AKAP6Q13023 2319 aa8.38□□□□□ -1.07
CD28-202ENST00000374481 TRAV12-3A0A0B4J271 114 aa8.37□□□□□ -1.07
CD28-202ENST00000374481 TRGV8A0A0C4DH27 118 aa8.37□□□□□ -1.07
CD28-202ENST00000374481 SLC25A53Q5H9E4 307 aa8.37□□□□□ -1.07
CD28-202ENST00000374481 CITED2Q99967 270 aaPredicted RBP8.37□□□□□ -1.07
CD28-202ENST00000374481 ACP7Q6ZNF0 438 aa8.37□□□□□ -1.07
CD28-202ENST00000374481 SPXQ9BT56 116 aa8.37□□□□□ -1.07
CD28-202ENST00000374481 H3BMM0 161 aa8.37□□□□□ -1.07
CD28-202ENST00000374481 K7EMI3 77 aa8.37□□□□□ -1.07
CD28-202ENST00000374481 UPK2O00526 184 aa8.37□□□□□ -1.07
CD28-202ENST00000374481 RPL32P62910 135 aaKnown RBP8.37□□□□□ -1.07
CD28-202ENST00000374481 DGAT2L7PQ6IED9 249 aa8.37□□□□□ -1.07
CD28-202ENST00000374481 TMEM92Q6UXU6 159 aa8.37□□□□□ -1.07
CD28-202ENST00000374481 UBE2WQ96B02 151 aa8.37□□□□□ -1.07
CD28-202ENST00000374481 ZNF524Q96C55 264 aa8.37□□□□□ -1.07
CD28-202ENST00000374481 HS3ST6Q96QI5 342 aa8.37□□□□□ -1.07
CD28-202ENST00000374481 H7C1H1 209 aa8.37□□□□□ -1.07
CD28-202ENST00000374481 LAGE3Q14657 143 aa8.37□□□□□ -1.07
CD28-202ENST00000374481 KLF13Q9Y2Y9 288 aaPredicted RBP8.37□□□□□ -1.07
CD28-202ENST00000374481 ZNF407Q9C0G0 2248 aa8.37□□□□□ -1.07
CD28-202ENST00000374481 C5orf47Q569G3 176 aa8.36□□□□□ -1.07
CD28-202ENST00000374481 KIR2DL4Q99706 377 aa8.36□□□□□ -1.07
CD28-202ENST00000374481 RPP25Q9BUL9 199 aaKnown RBP8.36□□□□□ -1.07
CD28-202ENST00000374481 ZNF492Q9P255 531 aa8.36□□□□□ -1.07
CD28-202ENST00000374481 IGHV3-72A0A0B4J1Y9 119 aa8.36□□□□□ -1.07
CD28-202ENST00000374481 PRB4P10163 310 aaPredicted RBP8.36□□□□□ -1.07
CD28-202ENST00000374481 TFF2Q03403 129 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms